Protein–RNA interactions for Protein: P35453

HOXD13, Homeobox protein Hox-D13, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD13P35453 RNU6-969P-201ENST00000383900 105 ntBASIC1.17□□□□□ -2.22
HOXD13P35453 SNORA72.4-201ENST00000384174 132 ntBASIC1.17□□□□□ -2.22
HOXD13P35453 RNU6-474P-201ENST00000384243 107 ntBASIC1.17□□□□□ -2.22
HOXD13P35453 Y_RNA.535-201ENST00000384612 99 ntBASIC1.17□□□□□ -2.22
HOXD13P35453 Y_RNA.569-201ENST00000384749 103 ntBASIC1.17□□□□□ -2.22
HOXD13P35453 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC1.17□□□□□ -2.22
HOXD13P35453 AC023449.1-201ENST00000454464 154 ntBASIC1.17□□□□□ -2.22
HOXD13P35453 RNU6-191P-201ENST00000516295 94 ntBASIC1.17□□□□□ -2.22
HOXD13P35453 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.17□□□□□ -2.22
HOXD13P35453 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC1.17□□□□□ -2.22
HOXD13P35453 AC037487.3-201ENST00000606668 112 ntBASIC1.17□□□□□ -2.22
HOXD13P35453 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.17□□□□□ -2.22
HOXD13P35453 AL391903.3-201ENST00000612158 163 ntBASIC1.17□□□□□ -2.22
HOXD13P35453 Y_RNA.136-201ENST00000363444 102 ntBASIC1.16□□□□□ -2.22
HOXD13P35453 RNU6-899P-201ENST00000363947 107 ntBASIC1.16□□□□□ -2.22
HOXD13P35453 RNU6-450P-201ENST00000364654 107 ntBASIC1.16□□□□□ -2.22
HOXD13P35453 Y_RNA.338-201ENST00000365320 114 ntBASIC1.16□□□□□ -2.22
HOXD13P35453 RNU6-321P-201ENST00000410912 106 ntBASIC1.16□□□□□ -2.22
HOXD13P35453 MTCO2P12-201ENST00000427426 682 ntBASIC1.16□□□□□ -2.22
HOXD13P35453 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.16□□□□□ -2.22
HOXD13P35453 SNORA18.7-201ENST00000516910 131 ntBASIC1.16□□□□□ -2.22
HOXD13P35453 AL512605.2-201ENST00000592972 256 ntBASIC1.16□□□□□ -2.22
HOXD13P35453 RAC1P9-201ENST00000604990 392 ntBASIC1.16□□□□□ -2.22
HOXD13P35453 PRELID3BP2-201ENST00000605362 201 ntBASIC1.16□□□□□ -2.22
HOXD13P35453 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
HOXD13P35453 RNU6-144P-201ENST00000383951 107 ntBASIC1.15□□□□□ -2.23
HOXD13P35453 AC002429.1-201ENST00000437672 148 ntBASIC1.15□□□□□ -2.23
HOXD13P35453 RNU7-90P-201ENST00000459216 62 ntBASIC1.15□□□□□ -2.23
HOXD13P35453 RNU6-1143P-201ENST00000516125 104 ntBASIC1.15□□□□□ -2.23
HOXD13P35453 RNU6-496P-201ENST00000516145 99 ntBASIC1.15□□□□□ -2.23
HOXD13P35453 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC1.15□□□□□ -2.23
HOXD13P35453 MIR6078-201ENST00000611069 100 ntBASIC1.15□□□□□ -2.23
HOXD13P35453 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
HOXD13P35453 AL391516.1-201ENST00000554380 2449 ntBASIC1.14□□□□□ -2.23
HOXD13P35453 RNA5SP48-201ENST00000363969 126 ntBASIC1.14□□□□□ -2.23
HOXD13P35453 RNU6-801P-201ENST00000364087 105 ntBASIC1.14□□□□□ -2.23
HOXD13P35453 Y_RNA.796-201ENST00000364268 102 ntBASIC1.14□□□□□ -2.23
HOXD13P35453 Y_RNA.799-201ENST00000364992 102 ntBASIC1.14□□□□□ -2.23
HOXD13P35453 RNU6-514P-201ENST00000384208 107 ntBASIC1.14□□□□□ -2.23
HOXD13P35453 RNU6-1067P-201ENST00000384752 107 ntBASIC1.14□□□□□ -2.23
HOXD13P35453 MIR200A-201ENST00000384875 90 ntBASIC1.14□□□□□ -2.23
HOXD13P35453 SNORA53-201ENST00000391141 249 ntBASIC1.14□□□□□ -2.23
HOXD13P35453 MIR548P-201ENST00000408336 84 ntBASIC1.14□□□□□ -2.23
HOXD13P35453 SNORD123-201ENST00000459473 70 ntBASIC1.14□□□□□ -2.23
HOXD13P35453 AC010655.3-201ENST00000478818 450 ntBASIC1.14□□□□□ -2.23
HOXD13P35453 UBL5P1-201ENST00000507979 193 ntBASIC1.14□□□□□ -2.23
HOXD13P35453 RPL23AP91-201ENST00000569211 455 ntBASIC1.14□□□□□ -2.23
HOXD13P35453 MIR4764-201ENST00000580680 88 ntBASIC1.14□□□□□ -2.23
HOXD13P35453 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC1.14□□□□□ -2.23
HOXD13P35453 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.14□□□□□ -2.23
HOXD13P35453 HSPE1P19-201ENST00000603327 295 ntBASIC1.14□□□□□ -2.23
HOXD13P35453 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.14□□□□□ -2.23
HOXD13P35453 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
HOXD13P35453 MTND4P29-201ENST00000503122 1372 ntBASIC1.13□□□□□ -2.23
HOXD13P35453 RNU6-797P-201ENST00000363101 109 ntBASIC1.13□□□□□ -2.23
HOXD13P35453 RNA5SP264-201ENST00000363115 107 ntBASIC1.13□□□□□ -2.23
HOXD13P35453 Y_RNA.158-201ENST00000363651 101 ntBASIC1.13□□□□□ -2.23
HOXD13P35453 SNORD114-24-201ENST00000365029 72 ntBASIC1.13□□□□□ -2.23
HOXD13P35453 Y_RNA.455-201ENST00000384230 98 ntBASIC1.13□□□□□ -2.23
HOXD13P35453 MTCO2P33-201ENST00000402100 465 ntBASIC1.13□□□□□ -2.23
HOXD13P35453 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.13□□□□□ -2.23
HOXD13P35453 AC108729.3-201ENST00000513484 108 ntBASIC1.13□□□□□ -2.23
HOXD13P35453 MIR3192-201ENST00000584920 77 ntBASIC1.13□□□□□ -2.23
HOXD13P35453 AL355297.3-201ENST00000604082 446 ntBASIC1.13□□□□□ -2.23
HOXD13P35453 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
HOXD13P35453 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.12□□□□□ -2.23
HOXD13P35453 RNU6-1048P-201ENST00000364054 107 ntBASIC1.12□□□□□ -2.23
HOXD13P35453 Y_RNA.202-201ENST00000364083 110 ntBASIC1.12□□□□□ -2.23
HOXD13P35453 RNU4-38P-201ENST00000364472 129 ntBASIC1.12□□□□□ -2.23
HOXD13P35453 Y_RNA.363-201ENST00000365529 113 ntBASIC1.12□□□□□ -2.23
HOXD13P35453 Y_RNA.418-201ENST00000384029 102 ntBASIC1.12□□□□□ -2.23
HOXD13P35453 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC1.12□□□□□ -2.23
HOXD13P35453 Y_RNA.581-201ENST00000391017 97 ntBASIC1.12□□□□□ -2.23
HOXD13P35453 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.12□□□□□ -2.23
HOXD13P35453 RNU7-21P-201ENST00000459430 62 ntBASIC1.12□□□□□ -2.23
HOXD13P35453 OR2A41P-201ENST00000473586 105 ntBASIC1.12□□□□□ -2.23
HOXD13P35453 Y_RNA.711-201ENST00000516993 102 ntBASIC1.12□□□□□ -2.23
HOXD13P35453 MIR4661-201ENST00000582720 75 ntBASIC1.12□□□□□ -2.23
HOXD13P35453 MIR4295-201ENST00000585286 85 ntBASIC1.12□□□□□ -2.23
HOXD13P35453 AC005357.1-201ENST00000588399 301 ntBASIC1.12□□□□□ -2.23
HOXD13P35453 AC008163.1-202ENST00000636004 2889 ntBASIC1.12□□□□□ -2.23
HOXD13P35453 RNU6-1205P-201ENST00000363625 106 ntBASIC1.11□□□□□ -2.23
HOXD13P35453 Y_RNA.276-201ENST00000364732 109 ntBASIC1.11□□□□□ -2.23
HOXD13P35453 RNU6-290P-201ENST00000365212 101 ntBASIC1.11□□□□□ -2.23
HOXD13P35453 SNORA22B-201ENST00000383876 138 ntBASIC1.11□□□□□ -2.23
HOXD13P35453 Y_RNA.604-201ENST00000410574 102 ntBASIC1.11□□□□□ -2.23
HOXD13P35453 RNU2-14P-201ENST00000411053 191 ntBASIC1.11□□□□□ -2.23
HOXD13P35453 MRPL35P3-201ENST00000421557 364 ntBASIC1.11□□□□□ -2.23
HOXD13P35453 RPS29P28-201ENST00000446439 141 ntBASIC1.11□□□□□ -2.23
HOXD13P35453 HSPE1P25-201ENST00000455484 251 ntBASIC1.11□□□□□ -2.23
HOXD13P35453 COX6CP14-201ENST00000469580 174 ntBASIC1.11□□□□□ -2.23
HOXD13P35453 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC1.11□□□□□ -2.23
HOXD13P35453 TRMT112P2-201ENST00000512910 132 ntBASIC1.11□□□□□ -2.23
HOXD13P35453 RNU6-1053P-201ENST00000515930 101 ntBASIC1.11□□□□□ -2.23
HOXD13P35453 RNY3P15-201ENST00000516297 97 ntBASIC1.11□□□□□ -2.23
HOXD13P35453 RNU2-31P-201ENST00000516954 155 ntBASIC1.11□□□□□ -2.23
HOXD13P35453 MIR103A2-201ENST00000362154 78 ntBASIC1.1□□□□□ -2.23
HOXD13P35453 SNORA25.1-201ENST00000362326 128 ntBASIC1.1□□□□□ -2.23
HOXD13P35453 RNU6-770P-201ENST00000363929 105 ntBASIC1.1□□□□□ -2.23
HOXD13P35453 SNORA26.5-201ENST00000391215 123 ntBASIC1.1□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 113.7 ms