Protein–RNA interactions for Protein: P35052

GPC1, Glypican-1, humanhuman

Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1P35052 MAPK10-322ENST00000641485 4530 ntBASIC3.18□□□□□ -1.9
GPC1P35052 MIR208A-201ENST00000362287 71 ntBASIC3.18□□□□□ -1.9
GPC1P35052 RNU4-35P-201ENST00000362588 141 ntBASIC3.18□□□□□ -1.9
GPC1P35052 MIR1262-201ENST00000408276 93 ntBASIC3.18□□□□□ -1.9
GPC1P35052 AC093578.1-201ENST00000415219 368 ntBASIC3.18□□□□□ -1.9
GPC1P35052 AL353813.1-201ENST00000440700 253 ntBASIC3.18□□□□□ -1.9
GPC1P35052 AL135938.1-201ENST00000443141 297 ntBASIC3.18□□□□□ -1.9
GPC1P35052 HMGN1P18-201ENST00000457642 277 ntBASIC3.18□□□□□ -1.9
GPC1P35052 snoU13.22-201ENST00000459428 104 ntBASIC3.18□□□□□ -1.9
GPC1P35052 RNU6-267P-201ENST00000516714 103 ntBASIC3.18□□□□□ -1.9
GPC1P35052 MIR2276-201ENST00000516886 89 ntBASIC3.18□□□□□ -1.9
GPC1P35052 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.17□□□□□ -1.9
GPC1P35052 AC092435.3-201ENST00000565538 3654 ntBASIC3.17□□□□□ -1.9
GPC1P35052 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
GPC1P35052 SNORD115-34-201ENST00000362441 82 ntBASIC3.17□□□□□ -1.9
GPC1P35052 SNORD115-12-201ENST00000362583 82 ntBASIC3.17□□□□□ -1.9
GPC1P35052 SNORD115-29-201ENST00000362834 82 ntBASIC3.17□□□□□ -1.9
GPC1P35052 SNORD115-9-201ENST00000362912 82 ntBASIC3.17□□□□□ -1.9
GPC1P35052 SNORD115-21-201ENST00000362963 81 ntBASIC3.17□□□□□ -1.9
GPC1P35052 SNORD115-14-201ENST00000363090 81 ntBASIC3.17□□□□□ -1.9
GPC1P35052 SNORD115-13-201ENST00000363358 82 ntBASIC3.17□□□□□ -1.9
GPC1P35052 SNORD115-41-201ENST00000363608 82 ntBASIC3.17□□□□□ -1.9
GPC1P35052 SNORD115-11-201ENST00000363616 82 ntBASIC3.17□□□□□ -1.9
GPC1P35052 SNORD115-5-201ENST00000363633 82 ntBASIC3.17□□□□□ -1.9
GPC1P35052 SNORD115-39-201ENST00000363694 82 ntBASIC3.17□□□□□ -1.9
GPC1P35052 SNORD115-4-201ENST00000363810 82 ntBASIC3.17□□□□□ -1.9
GPC1P35052 SNORD115-16-201ENST00000363887 82 ntBASIC3.17□□□□□ -1.9
GPC1P35052 SNORD115-6-201ENST00000363942 82 ntBASIC3.17□□□□□ -1.9
GPC1P35052 SNORD115-42-201ENST00000364273 82 ntBASIC3.17□□□□□ -1.9
GPC1P35052 SNORD115-15-201ENST00000364809 81 ntBASIC3.17□□□□□ -1.9
GPC1P35052 SNORD115-1-201ENST00000364961 82 ntBASIC3.17□□□□□ -1.9
GPC1P35052 SNORD115-26-201ENST00000365067 82 ntBASIC3.17□□□□□ -1.9
GPC1P35052 SNORD115-10-201ENST00000365073 81 ntBASIC3.17□□□□□ -1.9
GPC1P35052 SNORD115-43-201ENST00000365503 82 ntBASIC3.17□□□□□ -1.9
GPC1P35052 SNORA70.4-201ENST00000365509 134 ntBASIC3.17□□□□□ -1.9
GPC1P35052 SNORD115-36-201ENST00000365629 82 ntBASIC3.17□□□□□ -1.9
GPC1P35052 Y_RNA.437-201ENST00000384113 113 ntBASIC3.17□□□□□ -1.9
GPC1P35052 RNU6-675P-201ENST00000384236 104 ntBASIC3.17□□□□□ -1.9
GPC1P35052 Y_RNA.467-201ENST00000384297 102 ntBASIC3.17□□□□□ -1.9
GPC1P35052 RNU6-616P-201ENST00000384353 107 ntBASIC3.17□□□□□ -1.9
GPC1P35052 SNORD17-201ENST00000390930 237 ntBASIC3.17□□□□□ -1.9
GPC1P35052 SNORD77B-201ENST00000391112 67 ntBASIC3.17□□□□□ -1.9
GPC1P35052 MIR1267-201ENST00000408723 78 ntBASIC3.17□□□□□ -1.9
GPC1P35052 Z92545.1-201ENST00000411782 234 ntBASIC3.17□□□□□ -1.9
GPC1P35052 AL049873.1-201ENST00000480540 376 ntBASIC3.17□□□□□ -1.9
GPC1P35052 Y_RNA.705-201ENST00000516862 110 ntBASIC3.17□□□□□ -1.9
GPC1P35052 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.17□□□□□ -1.9
GPC1P35052 Y_RNA.95-201ENST00000363079 95 ntBASIC3.16□□□□□ -1.9
GPC1P35052 RNA5SP493-201ENST00000364115 91 ntBASIC3.16□□□□□ -1.9
GPC1P35052 RNU6-787P-201ENST00000384032 107 ntBASIC3.16□□□□□ -1.9
GPC1P35052 AC015922.2-201ENST00000435593 184 ntBASIC3.16□□□□□ -1.9
GPC1P35052 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC3.16□□□□□ -1.9
GPC1P35052 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.16□□□□□ -1.9
GPC1P35052 UBL5P3-201ENST00000475112 231 ntBASIC3.16□□□□□ -1.9
GPC1P35052 AC026403.1-201ENST00000518938 295 ntBASIC3.16□□□□□ -1.9
GPC1P35052 IGLV3-17-201ENST00000519099 244 ntBASIC3.16□□□□□ -1.9
GPC1P35052 MIR5588-201ENST00000581890 63 ntBASIC3.16□□□□□ -1.9
GPC1P35052 U3.45-201ENST00000607547 219 ntBASIC3.16□□□□□ -1.9
GPC1P35052 AL512310.12-203ENST00000640543 90 ntBASIC3.16□□□□□ -1.9
GPC1P35052 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.16□□□□□ -1.9
GPC1P35052 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
GPC1P35052 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
GPC1P35052 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
GPC1P35052 AP000648.3-201ENST00000623539 4507 ntBASIC3.15□□□□□ -1.9
GPC1P35052 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.9
GPC1P35052 RNU6-23P-201ENST00000363283 107 ntBASIC3.15□□□□□ -1.91
GPC1P35052 MIR449B-201ENST00000384995 97 ntBASIC3.15□□□□□ -1.91
GPC1P35052 RNU6-887P-201ENST00000410660 100 ntBASIC3.15□□□□□ -1.91
GPC1P35052 SNORA64.4-201ENST00000516632 81 ntBASIC3.15□□□□□ -1.91
GPC1P35052 RNA5SP33-201ENST00000516687 98 ntBASIC3.15□□□□□ -1.91
GPC1P35052 RNU6-1258P-201ENST00000516911 111 ntBASIC3.15□□□□□ -1.91
GPC1P35052 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.15□□□□□ -1.91
GPC1P35052 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.15□□□□□ -1.91
GPC1P35052 AC005000.2-201ENST00000605468 310 ntBASIC3.15□□□□□ -1.91
GPC1P35052 MIR8054-201ENST00000620877 86 ntBASIC3.15□□□□□ -1.91
GPC1P35052 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.91
GPC1P35052 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.15□□□□□ -1.91
GPC1P35052 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.14□□□□□ -1.91
GPC1P35052 SNORD115-3-201ENST00000363100 82 ntBASIC3.14□□□□□ -1.91
GPC1P35052 RNA5SP50-201ENST00000363731 107 ntBASIC3.14□□□□□ -1.91
GPC1P35052 Y_RNA.313-201ENST00000365095 103 ntBASIC3.14□□□□□ -1.91
GPC1P35052 SNORD115-35-201ENST00000365122 82 ntBASIC3.14□□□□□ -1.91
GPC1P35052 RNU6-979P-201ENST00000383896 107 ntBASIC3.14□□□□□ -1.91
GPC1P35052 SNORD21-201ENST00000383953 95 ntBASIC3.14□□□□□ -1.91
GPC1P35052 RNU6-1201P-201ENST00000384227 107 ntBASIC3.14□□□□□ -1.91
GPC1P35052 RN7SKP111-201ENST00000410349 271 ntBASIC3.14□□□□□ -1.91
GPC1P35052 AC003685.2-201ENST00000422795 395 ntBASIC3.14□□□□□ -1.91
GPC1P35052 CST9LP2-201ENST00000437612 320 ntBASIC3.14□□□□□ -1.91
GPC1P35052 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC3.14□□□□□ -1.91
GPC1P35052 IGKV2-26-201ENST00000518305 343 ntBASIC3.14□□□□□ -1.91
GPC1P35052 AC104027.1-201ENST00000521887 300 ntBASIC3.14□□□□□ -1.91
GPC1P35052 MIR548AE2-201ENST00000583456 67 ntBASIC3.14□□□□□ -1.91
GPC1P35052 MIR3922-201ENST00000585192 84 ntBASIC3.14□□□□□ -1.91
GPC1P35052 AC008739.3-201ENST00000603262 127 ntBASIC3.14□□□□□ -1.91
GPC1P35052 SNORA28-201ENST00000606769 126 ntBASIC3.14□□□□□ -1.91
GPC1P35052 uc_338.1-201ENST00000612113 180 ntBASIC3.14□□□□□ -1.91
GPC1P35052 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC3.14□□□□□ -1.91
GPC1P35052 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
GPC1P35052 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.14□□□□□ -1.91
GPC1P35052 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 183.4 ms