Protein–RNA interactions for Protein: P31431

SDC4, Syndecan-4, humanhuman

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDC4P31431 MIR3674-201ENST00000636576 68 ntBASIC-0.87□□□□□ -2.55
SDC4P31431 MIR101-1-201ENST00000362265 75 ntBASIC-0.88□□□□□ -2.55
SDC4P31431 Y_RNA.159-201ENST00000363674 87 ntBASIC-0.88□□□□□ -2.55
SDC4P31431 RNA5SP245-201ENST00000364239 121 ntBASIC-0.88□□□□□ -2.55
SDC4P31431 RNU6-726P-201ENST00000364680 107 ntBASIC-0.88□□□□□ -2.55
SDC4P31431 SNORA22B-201ENST00000383876 138 ntBASIC-0.88□□□□□ -2.55
SDC4P31431 RNU6-708P-201ENST00000384217 107 ntBASIC-0.88□□□□□ -2.55
SDC4P31431 RNU6-1145P-201ENST00000384246 107 ntBASIC-0.88□□□□□ -2.55
SDC4P31431 Y_RNA.536-201ENST00000384621 113 ntBASIC-0.88□□□□□ -2.55
SDC4P31431 Y_RNA.588-201ENST00000391254 102 ntBASIC-0.88□□□□□ -2.55
SDC4P31431 SNORD75.1-201ENST00000408373 60 ntBASIC-0.88□□□□□ -2.55
SDC4P31431 MTATP6P18-201ENST00000417994 673 ntBASIC-0.88□□□□□ -2.55
SDC4P31431 CEP57L1P1-201ENST00000430943 1201 ntBASIC-0.88□□□□□ -2.55
SDC4P31431 AL009048.1-201ENST00000450437 298 ntBASIC-0.88□□□□□ -2.55
SDC4P31431 RNU7-67P-201ENST00000459003 62 ntBASIC-0.88□□□□□ -2.55
SDC4P31431 SNORA18.6-201ENST00000516792 115 ntBASIC-0.88□□□□□ -2.55
SDC4P31431 Y_RNA.714-201ENST00000517065 90 ntBASIC-0.88□□□□□ -2.55
SDC4P31431 AC022616.4-201ENST00000522985 181 ntBASIC-0.88□□□□□ -2.55
SDC4P31431 MIR378D2-201ENST00000580636 98 ntBASIC-0.88□□□□□ -2.55
SDC4P31431 AP001506.1-201ENST00000615444 211 ntBASIC-0.88□□□□□ -2.55
SDC4P31431 AC010205.1-201ENST00000616668 449 ntBASIC-0.88□□□□□ -2.55
SDC4P31431 AL162376.1-201ENST00000624117 175 ntBASIC-0.88□□□□□ -2.55
SDC4P31431 RNY1P16-201ENST00000363063 111 ntBASIC-0.89□□□□□ -2.55
SDC4P31431 RNA5SP98-201ENST00000363158 137 ntBASIC-0.89□□□□□ -2.55
SDC4P31431 Y_RNA.170-201ENST00000363746 110 ntBASIC-0.89□□□□□ -2.55
SDC4P31431 Y_RNA.517-201ENST00000384551 106 ntBASIC-0.89□□□□□ -2.55
SDC4P31431 RNU6-535P-201ENST00000384722 107 ntBASIC-0.89□□□□□ -2.55
SDC4P31431 MIR876-201ENST00000401147 81 ntBASIC-0.89□□□□□ -2.55
SDC4P31431 RNA5SP475-201ENST00000410568 110 ntBASIC-0.89□□□□□ -2.55
SDC4P31431 RNA5SP451-201ENST00000410588 110 ntBASIC-0.89□□□□□ -2.55
SDC4P31431 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC-0.89□□□□□ -2.55
SDC4P31431 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC-0.89□□□□□ -2.55
SDC4P31431 snoU109.3-201ENST00000459477 145 ntBASIC-0.89□□□□□ -2.55
SDC4P31431 RNU6-475P-201ENST00000516073 104 ntBASIC-0.89□□□□□ -2.55
SDC4P31431 RNU2-12P-201ENST00000517216 168 ntBASIC-0.89□□□□□ -2.55
SDC4P31431 ELOCP32-201ENST00000548625 324 ntBASIC-0.89□□□□□ -2.55
SDC4P31431 AL391262.2-201ENST00000622466 494 ntBASIC-0.89□□□□□ -2.55
SDC4P31431 Y_RNA.167-201ENST00000363735 109 ntBASIC-0.9□□□□□ -2.55
SDC4P31431 SNORA72-201ENST00000384339 132 ntBASIC-0.9□□□□□ -2.55
SDC4P31431 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.9□□□□□ -2.55
SDC4P31431 SNORD72-201ENST00000390994 80 ntBASIC-0.9□□□□□ -2.55
SDC4P31431 AL022718.1-201ENST00000412004 84 ntBASIC-0.9□□□□□ -2.55
SDC4P31431 USP9YP16-201ENST00000430287 407 ntBASIC-0.9□□□□□ -2.55
SDC4P31431 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC-0.9□□□□□ -2.55
SDC4P31431 USP9YP23-201ENST00000455085 407 ntBASIC-0.9□□□□□ -2.55
SDC4P31431 RNU6-625P-201ENST00000459412 107 ntBASIC-0.9□□□□□ -2.55
SDC4P31431 MIR4509-3-201ENST00000578671 94 ntBASIC-0.9□□□□□ -2.55
SDC4P31431 MIR4509-2-201ENST00000583920 94 ntBASIC-0.9□□□□□ -2.55
SDC4P31431 AC011458.1-201ENST00000604034 617 ntBASIC-0.9□□□□□ -2.55
SDC4P31431 AP001330.5-201ENST00000607176 411 ntBASIC-0.9□□□□□ -2.55
SDC4P31431 DLEU2_5.1-201ENST00000615567 84 ntBASIC-0.9□□□□□ -2.55
SDC4P31431 AC105081.1-201ENST00000617727 106 ntBASIC-0.9□□□□□ -2.55
SDC4P31431 AL354950.2-201ENST00000617939 290 ntBASIC-0.9□□□□□ -2.55
SDC4P31431 MIR4509-1-201ENST00000618224 94 ntBASIC-0.9□□□□□ -2.55
SDC4P31431 MIR101-2-201ENST00000362195 79 ntBASIC-0.91□□□□□ -2.56
SDC4P31431 RNU6-1120P-201ENST00000362988 108 ntBASIC-0.91□□□□□ -2.56
SDC4P31431 Y_RNA.106-201ENST00000363189 100 ntBASIC-0.91□□□□□ -2.56
SDC4P31431 U8.6-201ENST00000364939 135 ntBASIC-0.91□□□□□ -2.56
SDC4P31431 SNORA1-201ENST00000384107 130 ntBASIC-0.91□□□□□ -2.56
SDC4P31431 Y_RNA.539-201ENST00000384635 107 ntBASIC-0.91□□□□□ -2.56
SDC4P31431 SNORA3B-201ENST00000391305 131 ntBASIC-0.91□□□□□ -2.56
SDC4P31431 AL603910.2-201ENST00000407268 136 ntBASIC-0.91□□□□□ -2.56
SDC4P31431 RNU6-1190P-201ENST00000410811 104 ntBASIC-0.91□□□□□ -2.56
SDC4P31431 MTCO1P20-201ENST00000425366 358 ntBASIC-0.91□□□□□ -2.56
SDC4P31431 EIF1P2-201ENST00000428233 350 ntBASIC-0.91□□□□□ -2.56
SDC4P31431 PCMTD1P1-201ENST00000455560 355 ntBASIC-0.91□□□□□ -2.56
SDC4P31431 RNU7-63P-201ENST00000459054 62 ntBASIC-0.91□□□□□ -2.56
SDC4P31431 RNA5SP169-201ENST00000517268 117 ntBASIC-0.91□□□□□ -2.56
SDC4P31431 AC024405.2-202ENST00000532731 184 ntBASIC-0.91□□□□□ -2.56
SDC4P31431 MIR5696-201ENST00000578474 85 ntBASIC-0.91□□□□□ -2.56
SDC4P31431 MIR4493-201ENST00000584016 73 ntBASIC-0.91□□□□□ -2.56
SDC4P31431 U7.6-201ENST00000610841 64 ntBASIC-0.91□□□□□ -2.56
SDC4P31431 AC073534.2-201ENST00000620377 381 ntBASIC-0.91□□□□□ -2.56
SDC4P31431 AC084368.1-201ENST00000620935 65 ntBASIC-0.91□□□□□ -2.56
SDC4P31431 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC-0.91□□□□□ -2.56
SDC4P31431 ZNF299P-201ENST00000406845 1804 ntBASIC-0.92□□□□□ -2.56
SDC4P31431 RNU6-82P-201ENST00000363970 107 ntBASIC-0.92□□□□□ -2.56
SDC4P31431 RNU6-1322P-201ENST00000364309 107 ntBASIC-0.92□□□□□ -2.56
SDC4P31431 SNORA69-201ENST00000383895 132 ntBASIC-0.92□□□□□ -2.56
SDC4P31431 RNU6-38P-201ENST00000384085 107 ntBASIC-0.92□□□□□ -2.56
SDC4P31431 Y_RNA.533-201ENST00000384596 114 ntBASIC-0.92□□□□□ -2.56
SDC4P31431 MIR122-201ENST00000385044 85 ntBASIC-0.92□□□□□ -2.56
SDC4P31431 U8.15-201ENST00000390947 134 ntBASIC-0.92□□□□□ -2.56
SDC4P31431 RNU6ATAC42P-201ENST00000408637 95 ntBASIC-0.92□□□□□ -2.56
SDC4P31431 RNU6-1199P-201ENST00000411249 104 ntBASIC-0.92□□□□□ -2.56
SDC4P31431 AC096949.1-201ENST00000412047 152 ntBASIC-0.92□□□□□ -2.56
SDC4P31431 AL033528.1-201ENST00000453780 140 ntBASIC-0.92□□□□□ -2.56
SDC4P31431 RNU7-175P-201ENST00000515915 61 ntBASIC-0.92□□□□□ -2.56
SDC4P31431 LRRC34P1-201ENST00000542742 915 ntBASIC-0.92□□□□□ -2.56
SDC4P31431 Y_RNA.49-201ENST00000362714 112 ntBASIC-0.93□□□□□ -2.56
SDC4P31431 RNU6-601P-201ENST00000384540 107 ntBASIC-0.93□□□□□ -2.56
SDC4P31431 MIR513B-201ENST00000385136 84 ntBASIC-0.93□□□□□ -2.56
SDC4P31431 RNU6-1158P-201ENST00000391167 107 ntBASIC-0.93□□□□□ -2.56
SDC4P31431 RN7SKP142-201ENST00000411236 328 ntBASIC-0.93□□□□□ -2.56
SDC4P31431 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC-0.93□□□□□ -2.56
SDC4P31431 MTND1P11-201ENST00000456661 876 ntBASIC-0.93□□□□□ -2.56
SDC4P31431 Y_RNA.697-201ENST00000516776 113 ntBASIC-0.93□□□□□ -2.56
SDC4P31431 AC131281.1-201ENST00000522984 164 ntBASIC-0.93□□□□□ -2.56
SDC4P31431 AC055872.1-201ENST00000570978 278 ntBASIC-0.93□□□□□ -2.56
SDC4P31431 MIR4491-201ENST00000581087 68 ntBASIC-0.93□□□□□ -2.56
Retrieved 100 of 98,524 protein–RNA pairs in 115 ms