Protein–RNA interactions for Protein: P31270

HOXA11, Homeobox protein Hox-A11, humanhuman

Predicted RBP Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA11P31270 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.94□□□□□ -2.1
HOXA11P31270 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
HOXA11P31270 MIR367-201ENST00000362299 68 ntBASIC1.93□□□□□ -2.1
HOXA11P31270 RNU1-58P-201ENST00000362413 163 ntBASIC1.93□□□□□ -2.1
HOXA11P31270 SNORD114-6-201ENST00000364393 72 ntBASIC1.93□□□□□ -2.1
HOXA11P31270 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC1.93□□□□□ -2.1
HOXA11P31270 RNU6-160P-201ENST00000384591 107 ntBASIC1.93□□□□□ -2.1
HOXA11P31270 MIR515-2-201ENST00000384883 83 ntBASIC1.93□□□□□ -2.1
HOXA11P31270 MIR515-1-201ENST00000384884 83 ntBASIC1.93□□□□□ -2.1
HOXA11P31270 MIR613-201ENST00000385248 95 ntBASIC1.93□□□□□ -2.1
HOXA11P31270 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
HOXA11P31270 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.93□□□□□ -2.1
HOXA11P31270 RPS4XP11-201ENST00000446897 772 ntBASIC1.93□□□□□ -2.1
HOXA11P31270 RPS26P45-201ENST00000471748 340 ntBASIC1.93□□□□□ -2.1
HOXA11P31270 AL160236.1-201ENST00000556317 195 ntBASIC1.93□□□□□ -2.1
HOXA11P31270 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.93□□□□□ -2.1
HOXA11P31270 AC100821.1-201ENST00000523153 2479 ntBASIC1.93□□□□□ -2.1
HOXA11P31270 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.92□□□□□ -2.1
HOXA11P31270 RNU6-704P-201ENST00000364162 103 ntBASIC1.92□□□□□ -2.1
HOXA11P31270 RNU6-1164P-201ENST00000364428 107 ntBASIC1.92□□□□□ -2.1
HOXA11P31270 RNA5SP190-201ENST00000365222 118 ntBASIC1.92□□□□□ -2.1
HOXA11P31270 RNU6-376P-201ENST00000384731 106 ntBASIC1.92□□□□□ -2.1
HOXA11P31270 MIR520G-201ENST00000385064 90 ntBASIC1.92□□□□□ -2.1
HOXA11P31270 RNU11-5P-201ENST00000391216 129 ntBASIC1.92□□□□□ -2.1
HOXA11P31270 RNU6-383P-201ENST00000410864 94 ntBASIC1.92□□□□□ -2.1
HOXA11P31270 RNU2-55P-201ENST00000411146 174 ntBASIC1.92□□□□□ -2.1
HOXA11P31270 AC010409.1-201ENST00000487382 476 ntBASIC1.92□□□□□ -2.1
HOXA11P31270 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.92□□□□□ -2.1
HOXA11P31270 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.92□□□□□ -2.1
HOXA11P31270 MIR3169-201ENST00000578032 83 ntBASIC1.92□□□□□ -2.1
HOXA11P31270 AC104465.1-201ENST00000611365 139 ntBASIC1.92□□□□□ -2.1
HOXA11P31270 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.92□□□□□ -2.1
HOXA11P31270 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
HOXA11P31270 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
HOXA11P31270 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
HOXA11P31270 RNU6-1130P-201ENST00000365434 107 ntBASIC1.91□□□□□ -2.1
HOXA11P31270 Y_RNA.400-201ENST00000383963 111 ntBASIC1.91□□□□□ -2.1
HOXA11P31270 AL606845.1-201ENST00000404881 255 ntBASIC1.91□□□□□ -2.1
HOXA11P31270 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
HOXA11P31270 CST2P1-201ENST00000425770 87 ntBASIC1.91□□□□□ -2.1
HOXA11P31270 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC1.91□□□□□ -2.1
HOXA11P31270 RPL23AP54-201ENST00000495129 419 ntBASIC1.91□□□□□ -2.1
HOXA11P31270 SNORA25.15-201ENST00000516487 89 ntBASIC1.91□□□□□ -2.1
HOXA11P31270 SNORA44.1-201ENST00000517031 108 ntBASIC1.91□□□□□ -2.1
HOXA11P31270 AC027419.1-201ENST00000522976 328 ntBASIC1.91□□□□□ -2.1
HOXA11P31270 AC024995.1-201ENST00000523014 93 ntBASIC1.91□□□□□ -2.1
HOXA11P31270 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.91□□□□□ -2.1
HOXA11P31270 AL358944.1-201ENST00000528537 144 ntBASIC1.91□□□□□ -2.1
HOXA11P31270 AL157777.2-201ENST00000258070 137 ntBASIC1.9□□□□□ -2.11
HOXA11P31270 Y_RNA.8-201ENST00000362353 102 ntBASIC1.9□□□□□ -2.11
HOXA11P31270 Y_RNA.357-201ENST00000365487 109 ntBASIC1.9□□□□□ -2.11
HOXA11P31270 RNU6-449P-201ENST00000383914 107 ntBASIC1.9□□□□□ -2.11
HOXA11P31270 MT-TT-201ENST00000387460 66 ntBASIC1.9□□□□□ -2.11
HOXA11P31270 MIR1253-201ENST00000408273 105 ntBASIC1.9□□□□□ -2.11
HOXA11P31270 TMSB4XP3-201ENST00000445144 114 ntBASIC1.9□□□□□ -2.11
HOXA11P31270 ATP5J2P3-201ENST00000451550 258 ntBASIC1.9□□□□□ -2.11
HOXA11P31270 AC245047.8-201ENST00000456455 284 ntBASIC1.9□□□□□ -2.11
HOXA11P31270 SNORD11-201ENST00000459124 84 ntBASIC1.9□□□□□ -2.11
HOXA11P31270 SNORD13-201ENST00000459299 104 ntBASIC1.9□□□□□ -2.11
HOXA11P31270 AC107027.2-201ENST00000512197 115 ntBASIC1.9□□□□□ -2.11
HOXA11P31270 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.9□□□□□ -2.11
HOXA11P31270 MIR4419B-201ENST00000577260 68 ntBASIC1.9□□□□□ -2.11
HOXA11P31270 MIR2681-201ENST00000581814 105 ntBASIC1.9□□□□□ -2.11
HOXA11P31270 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.9□□□□□ -2.11
HOXA11P31270 AL359075.3-201ENST00000613288 217 ntBASIC1.9□□□□□ -2.11
HOXA11P31270 AC022513.1-201ENST00000624512 117 ntBASIC1.9□□□□□ -2.11
HOXA11P31270 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
HOXA11P31270 AC018630.2-201ENST00000534866 2403 ntBASIC1.89□□□□□ -2.11
HOXA11P31270 RNU4-13P-201ENST00000364019 141 ntBASIC1.89□□□□□ -2.11
HOXA11P31270 Y_RNA.203-201ENST00000364106 102 ntBASIC1.89□□□□□ -2.11
HOXA11P31270 RNA5SP493-201ENST00000364115 91 ntBASIC1.89□□□□□ -2.11
HOXA11P31270 RNU6-728P-201ENST00000365375 104 ntBASIC1.89□□□□□ -2.11
HOXA11P31270 RNU6-81P-201ENST00000365608 104 ntBASIC1.89□□□□□ -2.11
HOXA11P31270 RNU6-417P-201ENST00000384712 107 ntBASIC1.89□□□□□ -2.11
HOXA11P31270 MIR562-201ENST00000384894 95 ntBASIC1.89□□□□□ -2.11
HOXA11P31270 MIR597-201ENST00000384968 97 ntBASIC1.89□□□□□ -2.11
HOXA11P31270 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.89□□□□□ -2.11
HOXA11P31270 RNU6-341P-201ENST00000516973 96 ntBASIC1.89□□□□□ -2.11
HOXA11P31270 AL929325.1-201ENST00000603096 117 ntBASIC1.89□□□□□ -2.11
HOXA11P31270 AC097639.2-201ENST00000603159 172 ntBASIC1.89□□□□□ -2.11
HOXA11P31270 AP000942.3-201ENST00000603702 160 ntBASIC1.89□□□□□ -2.11
HOXA11P31270 Y_RNA.796-201ENST00000364268 102 ntBASIC1.88□□□□□ -2.11
HOXA11P31270 Y_RNA.799-201ENST00000364992 102 ntBASIC1.88□□□□□ -2.11
HOXA11P31270 SNORD116-18-201ENST00000383961 92 ntBASIC1.88□□□□□ -2.11
HOXA11P31270 RNU6-484P-201ENST00000384016 107 ntBASIC1.88□□□□□ -2.11
HOXA11P31270 RNU6-643P-201ENST00000384018 107 ntBASIC1.88□□□□□ -2.11
HOXA11P31270 MIR15B-201ENST00000385045 98 ntBASIC1.88□□□□□ -2.11
HOXA11P31270 SUMO2P12-201ENST00000405924 140 ntBASIC1.88□□□□□ -2.11
HOXA11P31270 RNU6-561P-201ENST00000516222 102 ntBASIC1.88□□□□□ -2.11
HOXA11P31270 RNU6-346P-201ENST00000516288 111 ntBASIC1.88□□□□□ -2.11
HOXA11P31270 RNU6-1007P-201ENST00000516586 107 ntBASIC1.88□□□□□ -2.11
HOXA11P31270 AC011604.1-201ENST00000545978 196 ntBASIC1.88□□□□□ -2.11
HOXA11P31270 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC1.88□□□□□ -2.11
HOXA11P31270 MIR3935-201ENST00000583472 104 ntBASIC1.88□□□□□ -2.11
HOXA11P31270 DNAJC19P2-201ENST00000593340 302 ntBASIC1.88□□□□□ -2.11
HOXA11P31270 Y_RNA.778-201ENST00000620203 90 ntBASIC1.88□□□□□ -2.11
HOXA11P31270 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
HOXA11P31270 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.87□□□□□ -2.11
HOXA11P31270 RNU6-23P-201ENST00000363283 107 ntBASIC1.87□□□□□ -2.11
HOXA11P31270 RNU6-457P-201ENST00000363999 107 ntBASIC1.87□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 179.6 ms