Protein–RNA interactions for Protein: P30622

CLIP1, CAP-Gly domain-containing linker protein 1, humanhuman

Predictions only

Length 1,438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1P30622 RNU6-88P-201ENST00000606801 100 ntBASIC-1.49□□□□□ -2.65
CLIP1P30622 AL136370.1-201ENST00000608166 691 ntBASIC-1.49□□□□□ -2.65
CLIP1P30622 AL391834.2-201ENST00000609982 546 ntBASIC-1.49□□□□□ -2.65
CLIP1P30622 RNU6-266P-201ENST00000364225 107 ntBASIC-1.49□□□□□ -2.65
CLIP1P30622 SNORA24-201ENST00000384096 131 ntBASIC-1.49□□□□□ -2.65
CLIP1P30622 MIR181B2-201ENST00000385004 89 ntBASIC-1.49□□□□□ -2.65
CLIP1P30622 RNU6-913P-201ENST00000390913 95 ntBASIC-1.49□□□□□ -2.65
CLIP1P30622 RNU6ATAC42P-201ENST00000408637 95 ntBASIC-1.49□□□□□ -2.65
CLIP1P30622 USP9YP16-201ENST00000430287 407 ntBASIC-1.49□□□□□ -2.65
CLIP1P30622 AP000676.1-201ENST00000533307 52 ntBASIC-1.49□□□□□ -2.65
CLIP1P30622 OSBPL9P5-201ENST00000542581 171 ntBASIC-1.49□□□□□ -2.65
CLIP1P30622 MIR4307-201ENST00000582802 84 ntBASIC-1.49□□□□□ -2.65
CLIP1P30622 MIR4473-201ENST00000583731 91 ntBASIC-1.49□□□□□ -2.65
CLIP1P30622 MIR382-201ENST00000637119 76 ntBASIC-1.49□□□□□ -2.65
CLIP1P30622 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC-1.49□□□□□ -2.65
CLIP1P30622 SNORD115-2-201ENST00000362842 82 ntBASIC-1.5□□□□□ -2.65
CLIP1P30622 RNU6-433P-201ENST00000363216 104 ntBASIC-1.5□□□□□ -2.65
CLIP1P30622 RNY4P6-201ENST00000363667 96 ntBASIC-1.5□□□□□ -2.65
CLIP1P30622 SNORD115-8-201ENST00000363856 82 ntBASIC-1.5□□□□□ -2.65
CLIP1P30622 SNORD115-38-201ENST00000365037 82 ntBASIC-1.5□□□□□ -2.65
CLIP1P30622 RNU6-468P-201ENST00000384003 109 ntBASIC-1.5□□□□□ -2.65
CLIP1P30622 Y_RNA.439-201ENST00000384119 94 ntBASIC-1.5□□□□□ -2.65
CLIP1P30622 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC-1.5□□□□□ -2.65
CLIP1P30622 USP9YP12-201ENST00000450481 570 ntBASIC-1.5□□□□□ -2.65
CLIP1P30622 NDUFAF4P4-201ENST00000454883 502 ntBASIC-1.5□□□□□ -2.65
CLIP1P30622 RNU7-67P-201ENST00000459003 62 ntBASIC-1.5□□□□□ -2.65
CLIP1P30622 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC-1.5□□□□□ -2.65
CLIP1P30622 MTND1P24-201ENST00000552175 861 ntBASIC-1.5□□□□□ -2.65
CLIP1P30622 RNU4-1-201ENST00000363925 141 ntBASIC-1.51□□□□□ -2.65
CLIP1P30622 RNU6-1036P-201ENST00000383959 104 ntBASIC-1.51□□□□□ -2.65
CLIP1P30622 Y_RNA.494-201ENST00000384432 111 ntBASIC-1.51□□□□□ -2.65
CLIP1P30622 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC-1.51□□□□□ -2.65
CLIP1P30622 RNA5SP475-201ENST00000410568 110 ntBASIC-1.51□□□□□ -2.65
CLIP1P30622 AC096949.1-201ENST00000412047 152 ntBASIC-1.51□□□□□ -2.65
CLIP1P30622 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC-1.51□□□□□ -2.65
CLIP1P30622 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC-1.51□□□□□ -2.65
CLIP1P30622 RNU6-1194P-201ENST00000516208 104 ntBASIC-1.51□□□□□ -2.65
CLIP1P30622 RNU6-958P-201ENST00000516995 106 ntBASIC-1.51□□□□□ -2.65
CLIP1P30622 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC-1.51□□□□□ -2.65
CLIP1P30622 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC-1.51□□□□□ -2.65
CLIP1P30622 RNU6-85P-201ENST00000605989 107 ntBASIC-1.51□□□□□ -2.65
CLIP1P30622 AC011373.1-201ENST00000607270 237 ntBASIC-1.51□□□□□ -2.65
CLIP1P30622 AC097460.3-201ENST00000623099 442 ntBASIC-1.51□□□□□ -2.65
CLIP1P30622 RNU6-268P-201ENST00000364174 107 ntBASIC-1.52□□□□□ -2.65
CLIP1P30622 MIR539-201ENST00000365690 78 ntBASIC-1.52□□□□□ -2.65
CLIP1P30622 MIRLET7F2-201ENST00000385277 83 ntBASIC-1.52□□□□□ -2.65
CLIP1P30622 SNORD73A-201ENST00000386062 65 ntBASIC-1.52□□□□□ -2.65
CLIP1P30622 RNU6-1064P-201ENST00000410626 104 ntBASIC-1.52□□□□□ -2.65
CLIP1P30622 USP9YP30-201ENST00000430729 455 ntBASIC-1.52□□□□□ -2.65
CLIP1P30622 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC-1.52□□□□□ -2.65
CLIP1P30622 snoU13.13-201ENST00000458842 104 ntBASIC-1.52□□□□□ -2.65
CLIP1P30622 RNU6-437P-201ENST00000459408 95 ntBASIC-1.52□□□□□ -2.65
CLIP1P30622 RNU2-69P-201ENST00000516061 100 ntBASIC-1.52□□□□□ -2.65
CLIP1P30622 SNORA25.16-201ENST00000516741 121 ntBASIC-1.52□□□□□ -2.65
CLIP1P30622 AC093023.1-201ENST00000547375 507 ntBASIC-1.52□□□□□ -2.65
CLIP1P30622 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC-1.53□□□□□ -2.65
CLIP1P30622 RNU6-1287P-201ENST00000362914 107 ntBASIC-1.53□□□□□ -2.65
CLIP1P30622 RNU6-509P-201ENST00000363519 107 ntBASIC-1.53□□□□□ -2.65
CLIP1P30622 Y_RNA.181-201ENST00000363872 101 ntBASIC-1.53□□□□□ -2.65
CLIP1P30622 RNU4-66P-201ENST00000365199 138 ntBASIC-1.53□□□□□ -2.65
CLIP1P30622 Y_RNA.450-201ENST00000384198 113 ntBASIC-1.53□□□□□ -2.65
CLIP1P30622 RNU6-1060P-201ENST00000384664 107 ntBASIC-1.53□□□□□ -2.65
CLIP1P30622 RNU6-757P-201ENST00000410334 100 ntBASIC-1.53□□□□□ -2.65
CLIP1P30622 AC137499.1-201ENST00000427602 88 ntBASIC-1.53□□□□□ -2.65
CLIP1P30622 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC-1.53□□□□□ -2.65
CLIP1P30622 AC072046.2-201ENST00000618366 268 ntBASIC-1.53□□□□□ -2.65
CLIP1P30622 Y_RNA.283-201ENST00000364798 112 ntBASIC-1.54□□□□□ -2.66
CLIP1P30622 SNORD114-29-201ENST00000364819 70 ntBASIC-1.54□□□□□ -2.66
CLIP1P30622 RNU6-393P-201ENST00000384475 107 ntBASIC-1.54□□□□□ -2.66
CLIP1P30622 Y_RNA.517-201ENST00000384551 106 ntBASIC-1.54□□□□□ -2.66
CLIP1P30622 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC-1.54□□□□□ -2.66
CLIP1P30622 RNU6-706P-201ENST00000517229 104 ntBASIC-1.54□□□□□ -2.66
CLIP1P30622 AC040926.1-201ENST00000530195 238 ntBASIC-1.54□□□□□ -2.66
CLIP1P30622 MIR3115-201ENST00000577915 68 ntBASIC-1.54□□□□□ -2.66
CLIP1P30622 uc_338.10-201ENST00000621872 182 ntBASIC-1.54□□□□□ -2.66
CLIP1P30622 AC099654.12-201ENST00000639868 649 ntBASIC-1.54□□□□□ -2.66
CLIP1P30622 Y_RNA.38-201ENST00000362617 102 ntBASIC-1.55□□□□□ -2.66
CLIP1P30622 Y_RNA.179-201ENST00000363844 90 ntBASIC-1.55□□□□□ -2.66
CLIP1P30622 RNU6-442P-201ENST00000383968 104 ntBASIC-1.55□□□□□ -2.66
CLIP1P30622 Y_RNA.559-201ENST00000384686 107 ntBASIC-1.55□□□□□ -2.66
CLIP1P30622 SNORD70.1-201ENST00000391007 85 ntBASIC-1.55□□□□□ -2.66
CLIP1P30622 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC-1.55□□□□□ -2.66
CLIP1P30622 Y_RNA.714-201ENST00000517065 90 ntBASIC-1.55□□□□□ -2.66
CLIP1P30622 DEFB131E-201ENST00000532329 154 ntBASIC-1.55□□□□□ -2.66
CLIP1P30622 UBL5P4-201ENST00000562584 236 ntBASIC-1.55□□□□□ -2.66
CLIP1P30622 MIR3684-201ENST00000579779 74 ntBASIC-1.55□□□□□ -2.66
CLIP1P30622 AC008507.2-201ENST00000588402 1176 ntBASIC-1.55□□□□□ -2.66
CLIP1P30622 AP001282.2-201ENST00000616149 309 ntBASIC-1.55□□□□□ -2.66
CLIP1P30622 AL158209.2-201ENST00000619266 216 ntBASIC-1.55□□□□□ -2.66
CLIP1P30622 U6.115-201ENST00000636045 103 ntBASIC-1.55□□□□□ -2.66
CLIP1P30622 RNA5SP403-201ENST00000363598 108 ntBASIC-1.56□□□□□ -2.66
CLIP1P30622 MIR147A-201ENST00000385079 72 ntBASIC-1.56□□□□□ -2.66
CLIP1P30622 RNU6-1106P-201ENST00000390845 107 ntBASIC-1.56□□□□□ -2.66
CLIP1P30622 Y_RNA.578-201ENST00000390903 88 ntBASIC-1.56□□□□□ -2.66
CLIP1P30622 RPL30P16-201ENST00000419341 429 ntBASIC-1.56□□□□□ -2.66
CLIP1P30622 AC073648.5-201ENST00000603502 305 ntBASIC-1.56□□□□□ -2.66
CLIP1P30622 AL512506.1-201ENST00000613918 449 ntBASIC-1.56□□□□□ -2.66
CLIP1P30622 MTND5P17-201ENST00000418405 1603 ntBASIC-1.56□□□□□ -2.66
CLIP1P30622 RNU6-560P-201ENST00000364007 108 ntBASIC-1.57□□□□□ -2.66
CLIP1P30622 RNU6-702P-201ENST00000364982 107 ntBASIC-1.57□□□□□ -2.66
Retrieved 100 of 98,524 protein–RNA pairs in 132 ms