Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 SEM1P1-201ENST00000506694 209 ntBASIC3.2□□□□□ -1.9
RXRBP28702 SCARNA15-202ENST00000516881 127 ntBASIC3.2□□□□□ -1.9
RXRBP28702 MIR4765-201ENST00000585007 77 ntBASIC3.2□□□□□ -1.9
RXRBP28702 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC3.2□□□□□ -1.9
RXRBP28702 AL591926.4-201ENST00000616895 298 ntBASIC3.2□□□□□ -1.9
RXRBP28702 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
RXRBP28702 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC3.19□□□□□ -1.9
RXRBP28702 MIR378A-201ENST00000362177 66 ntBASIC3.19□□□□□ -1.9
RXRBP28702 Y_RNA.163-201ENST00000363702 113 ntBASIC3.19□□□□□ -1.9
RXRBP28702 RNA5SP125-201ENST00000364843 120 ntBASIC3.19□□□□□ -1.9
RXRBP28702 RNU6-1292P-201ENST00000383856 107 ntBASIC3.19□□□□□ -1.9
RXRBP28702 SNORD61-201ENST00000384252 73 ntBASIC3.19□□□□□ -1.9
RXRBP28702 SNORA51.10-201ENST00000384418 136 ntBASIC3.19□□□□□ -1.9
RXRBP28702 MIR570-201ENST00000384917 97 ntBASIC3.19□□□□□ -1.9
RXRBP28702 RNU2-32P-201ENST00000411193 191 ntBASIC3.19□□□□□ -1.9
RXRBP28702 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
RXRBP28702 MTATP6P21-201ENST00000440681 189 ntBASIC3.19□□□□□ -1.9
RXRBP28702 MRPS17P9-201ENST00000511924 393 ntBASIC3.19□□□□□ -1.9
RXRBP28702 RN7SKP43-201ENST00000516173 320 ntBASIC3.19□□□□□ -1.9
RXRBP28702 RNU6-126P-201ENST00000516685 103 ntBASIC3.19□□□□□ -1.9
RXRBP28702 U6.73-201ENST00000619194 103 ntBASIC3.19□□□□□ -1.9
RXRBP28702 UCA1.1-201ENST00000620952 75 ntBASIC3.19□□□□□ -1.9
RXRBP28702 AL035470.1-201ENST00000622571 220 ntBASIC3.19□□□□□ -1.9
RXRBP28702 MIR219B-201ENST00000637023 88 ntBASIC3.19□□□□□ -1.9
RXRBP28702 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC3.19□□□□□ -1.9
RXRBP28702 FAM35CP-201ENST00000554755 2470 ntBASIC3.18□□□□□ -1.9
RXRBP28702 RNU6-756P-201ENST00000383997 107 ntBASIC3.18□□□□□ -1.9
RXRBP28702 SNORA67.3-201ENST00000384366 140 ntBASIC3.18□□□□□ -1.9
RXRBP28702 Y_RNA.540-201ENST00000384638 111 ntBASIC3.18□□□□□ -1.9
RXRBP28702 HMGN2P18-201ENST00000450680 270 ntBASIC3.18□□□□□ -1.9
RXRBP28702 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC3.18□□□□□ -1.9
RXRBP28702 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC3.18□□□□□ -1.9
RXRBP28702 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
RXRBP28702 MIR7157-201ENST00000635801 60 ntBASIC3.18□□□□□ -1.9
RXRBP28702 MIR376A2-201ENST00000636782 80 ntBASIC3.18□□□□□ -1.9
RXRBP28702 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
RXRBP28702 MIR340-201ENST00000362125 95 ntBASIC3.17□□□□□ -1.9
RXRBP28702 SNORA68.1-201ENST00000364537 132 ntBASIC3.17□□□□□ -1.9
RXRBP28702 RNU6-294P-201ENST00000364999 102 ntBASIC3.17□□□□□ -1.9
RXRBP28702 Y_RNA.366-201ENST00000365540 102 ntBASIC3.17□□□□□ -1.9
RXRBP28702 RNY4P29-201ENST00000410801 97 ntBASIC3.17□□□□□ -1.9
RXRBP28702 RPS29P12-201ENST00000460178 152 ntBASIC3.17□□□□□ -1.9
RXRBP28702 AC026436.1-201ENST00000510537 270 ntBASIC3.17□□□□□ -1.9
RXRBP28702 TRMT112P2-201ENST00000512910 132 ntBASIC3.17□□□□□ -1.9
RXRBP28702 RNU2-34P-201ENST00000516534 121 ntBASIC3.17□□□□□ -1.9
RXRBP28702 RNU6-504P-201ENST00000516568 104 ntBASIC3.17□□□□□ -1.9
RXRBP28702 RNU6-762P-201ENST00000517107 102 ntBASIC3.17□□□□□ -1.9
RXRBP28702 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
RXRBP28702 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
RXRBP28702 U2.20-201ENST00000613956 192 ntBASIC3.17□□□□□ -1.9
RXRBP28702 MIR1291-201ENST00000627649 87 ntBASIC3.17□□□□□ -1.9
RXRBP28702 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC3.17□□□□□ -1.9
RXRBP28702 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
RXRBP28702 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
RXRBP28702 RNU6-888P-201ENST00000363010 101 ntBASIC3.16□□□□□ -1.9
RXRBP28702 RNU6-1131P-201ENST00000364955 107 ntBASIC3.16□□□□□ -1.9
RXRBP28702 MIR181B1-201ENST00000385240 110 ntBASIC3.16□□□□□ -1.9
RXRBP28702 SNORD77.3-201ENST00000391113 65 ntBASIC3.16□□□□□ -1.9
RXRBP28702 RNA5SP136-201ENST00000410906 107 ntBASIC3.16□□□□□ -1.9
RXRBP28702 RNU6-113P-201ENST00000516653 101 ntBASIC3.16□□□□□ -1.9
RXRBP28702 RNU6-965P-201ENST00000516721 96 ntBASIC3.16□□□□□ -1.9
RXRBP28702 RNU6-1149P-201ENST00000516810 97 ntBASIC3.16□□□□□ -1.9
RXRBP28702 RNU6-1096P-201ENST00000517089 102 ntBASIC3.16□□□□□ -1.9
RXRBP28702 RNA5SP490-201ENST00000517141 136 ntBASIC3.16□□□□□ -1.9
RXRBP28702 IGHVIII-67-2-201ENST00000519849 88 ntBASIC3.16□□□□□ -1.9
RXRBP28702 RNU6-94P-201ENST00000607728 107 ntBASIC3.16□□□□□ -1.9
RXRBP28702 MIR6845-201ENST00000613182 61 ntBASIC3.16□□□□□ -1.9
RXRBP28702 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
RXRBP28702 SNORA17.3-201ENST00000391159 129 ntBASIC3.15□□□□□ -1.91
RXRBP28702 SNORA26.7-201ENST00000391288 122 ntBASIC3.15□□□□□ -1.91
RXRBP28702 RNU6-1328P-201ENST00000410938 106 ntBASIC3.15□□□□□ -1.91
RXRBP28702 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.15□□□□□ -1.91
RXRBP28702 RPS29P6-201ENST00000438196 145 ntBASIC3.15□□□□□ -1.91
RXRBP28702 COX6CP6-201ENST00000490840 228 ntBASIC3.15□□□□□ -1.91
RXRBP28702 RNU7-128P-201ENST00000517247 62 ntBASIC3.15□□□□□ -1.91
RXRBP28702 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC3.15□□□□□ -1.91
RXRBP28702 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.15□□□□□ -1.91
RXRBP28702 AC016717.2-201ENST00000609089 5141 ntBASIC3.15□□□□□ -1.91
RXRBP28702 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC3.15□□□□□ -1.91
RXRBP28702 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC3.14□□□□□ -1.91
RXRBP28702 RNU1-96P-201ENST00000364163 162 ntBASIC3.14□□□□□ -1.91
RXRBP28702 Y_RNA.323-201ENST00000365157 109 ntBASIC3.14□□□□□ -1.91
RXRBP28702 MIR488-201ENST00000365739 83 ntBASIC3.14□□□□□ -1.91
RXRBP28702 SNORD24-201ENST00000383884 75 ntBASIC3.14□□□□□ -1.91
RXRBP28702 RNU6-1014P-201ENST00000383940 103 ntBASIC3.14□□□□□ -1.91
RXRBP28702 SNORA51.5-201ENST00000384126 131 ntBASIC3.14□□□□□ -1.91
RXRBP28702 Y_RNA.666-201ENST00000516187 112 ntBASIC3.14□□□□□ -1.91
RXRBP28702 SNORA9.3-201ENST00000516383 129 ntBASIC3.14□□□□□ -1.91
RXRBP28702 RNU6-1270P-201ENST00000517128 108 ntBASIC3.14□□□□□ -1.91
RXRBP28702 RNU6-586P-201ENST00000517265 104 ntBASIC3.14□□□□□ -1.91
RXRBP28702 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC3.14□□□□□ -1.91
RXRBP28702 JPX_2.1-201ENST00000614161 69 ntBASIC3.14□□□□□ -1.91
RXRBP28702 AL137067.1-201ENST00000615933 120 ntBASIC3.14□□□□□ -1.91
RXRBP28702 MIR6733-201ENST00000635723 61 ntBASIC3.14□□□□□ -1.91
RXRBP28702 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
RXRBP28702 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
RXRBP28702 RNA5SP456-201ENST00000364002 114 ntBASIC3.13□□□□□ -1.91
RXRBP28702 RNU6-438P-201ENST00000365561 103 ntBASIC3.13□□□□□ -1.91
RXRBP28702 U8.9-201ENST00000365667 134 ntBASIC3.13□□□□□ -1.91
RXRBP28702 AP004217.1-201ENST00000480579 346 ntBASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 196.9 ms