Protein–RNA interactions for Protein: P28356

HOXD9, Homeobox protein Hox-D9, humanhuman

Predicted RBP Predictions only

Length 352 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD9P28356 RPL23AP42-201ENST00000471152 471 ntBASIC1.99□□□□□ -2.09
HOXD9P28356 RNU6-197P-201ENST00000516680 100 ntBASIC1.99□□□□□ -2.09
HOXD9P28356 DEFB122-202ENST00000569013 197 ntBASIC1.99□□□□□ -2.09
HOXD9P28356 MIR378D2-201ENST00000580636 98 ntBASIC1.99□□□□□ -2.09
HOXD9P28356 AC002984.1-201ENST00000591692 448 ntBASIC1.99□□□□□ -2.09
HOXD9P28356 AL049861.1-201ENST00000603130 150 ntBASIC1.99□□□□□ -2.09
HOXD9P28356 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC1.99□□□□□ -2.09
HOXD9P28356 ZNF702P-202ENST00000434269 1966 ntBASIC1.99□□□□□ -2.09
HOXD9P28356 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC1.99□□□□□ -2.09
HOXD9P28356 RNA5SP432-201ENST00000362480 116 ntBASIC1.98□□□□□ -2.09
HOXD9P28356 RNA5SP276-201ENST00000362580 94 ntBASIC1.98□□□□□ -2.09
HOXD9P28356 RNU4-11P-201ENST00000365287 132 ntBASIC1.98□□□□□ -2.09
HOXD9P28356 RNU6-1138P-201ENST00000365359 106 ntBASIC1.98□□□□□ -2.09
HOXD9P28356 RNU6-597P-201ENST00000365620 102 ntBASIC1.98□□□□□ -2.09
HOXD9P28356 Y_RNA.393-201ENST00000383936 102 ntBASIC1.98□□□□□ -2.09
HOXD9P28356 Y_RNA.432-201ENST00000384087 111 ntBASIC1.98□□□□□ -2.09
HOXD9P28356 RNU6-768P-201ENST00000384683 107 ntBASIC1.98□□□□□ -2.09
HOXD9P28356 Y_RNA.586-201ENST00000391146 98 ntBASIC1.98□□□□□ -2.09
HOXD9P28356 SNORA79-201ENST00000408376 140 ntBASIC1.98□□□□□ -2.09
HOXD9P28356 RNA5SP450-201ENST00000411206 102 ntBASIC1.98□□□□□ -2.09
HOXD9P28356 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC1.98□□□□□ -2.09
HOXD9P28356 AC023449.1-201ENST00000454464 154 ntBASIC1.98□□□□□ -2.09
HOXD9P28356 RNU7-197P-201ENST00000458836 62 ntBASIC1.98□□□□□ -2.09
HOXD9P28356 RNU7-94P-201ENST00000459576 63 ntBASIC1.98□□□□□ -2.09
HOXD9P28356 AC090255.1-201ENST00000495779 349 ntBASIC1.98□□□□□ -2.09
HOXD9P28356 RNU6-1299P-201ENST00000516316 100 ntBASIC1.98□□□□□ -2.09
HOXD9P28356 RNU6-426P-201ENST00000516464 97 ntBASIC1.98□□□□□ -2.09
HOXD9P28356 AC097639.2-201ENST00000603159 172 ntBASIC1.98□□□□□ -2.09
HOXD9P28356 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC1.98□□□□□ -2.09
HOXD9P28356 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.98□□□□□ -2.09
HOXD9P28356 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
HOXD9P28356 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC1.98□□□□□ -2.09
HOXD9P28356 RNU1-58P-201ENST00000362413 163 ntBASIC1.97□□□□□ -2.09
HOXD9P28356 RNU6-862P-201ENST00000362804 105 ntBASIC1.97□□□□□ -2.09
HOXD9P28356 SNORA33-201ENST00000363664 130 ntBASIC1.97□□□□□ -2.09
HOXD9P28356 MIR583-201ENST00000384846 75 ntBASIC1.97□□□□□ -2.09
HOXD9P28356 MIR17-201ENST00000385012 84 ntBASIC1.97□□□□□ -2.09
HOXD9P28356 RNA5SP465-201ENST00000391195 109 ntBASIC1.97□□□□□ -2.09
HOXD9P28356 MIR513C-201ENST00000401352 84 ntBASIC1.97□□□□□ -2.09
HOXD9P28356 RNU6-257P-201ENST00000410238 98 ntBASIC1.97□□□□□ -2.09
HOXD9P28356 RPL30P13-201ENST00000418873 348 ntBASIC1.97□□□□□ -2.09
HOXD9P28356 AC099677.2-201ENST00000436385 175 ntBASIC1.97□□□□□ -2.09
HOXD9P28356 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC1.97□□□□□ -2.09
HOXD9P28356 HMGN1P7-201ENST00000491722 313 ntBASIC1.97□□□□□ -2.09
HOXD9P28356 RNA5SP182-201ENST00000516064 82 ntBASIC1.97□□□□□ -2.09
HOXD9P28356 RNU6-126P-201ENST00000516685 103 ntBASIC1.97□□□□□ -2.09
HOXD9P28356 AC112693.2-201ENST00000556538 232 ntBASIC1.97□□□□□ -2.09
HOXD9P28356 AC015712.3-201ENST00000559380 164 ntBASIC1.97□□□□□ -2.09
HOXD9P28356 MIR4287-201ENST00000579398 78 ntBASIC1.97□□□□□ -2.09
HOXD9P28356 AC022513.1-201ENST00000624512 117 ntBASIC1.97□□□□□ -2.09
HOXD9P28356 MIR6844-201ENST00000637122 62 ntBASIC1.97□□□□□ -2.09
HOXD9P28356 AP000553.5-201ENST00000641933 54 ntBASIC1.97□□□□□ -2.09
HOXD9P28356 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC1.97□□□□□ -2.09
HOXD9P28356 AC010332.2-201ENST00000613083 1904 ntBASIC1.96□□□□□ -2.1
HOXD9P28356 RNU6-978P-201ENST00000364371 103 ntBASIC1.96□□□□□ -2.1
HOXD9P28356 RNU6-1080P-201ENST00000383982 107 ntBASIC1.96□□□□□ -2.1
HOXD9P28356 Y_RNA.521-201ENST00000384560 114 ntBASIC1.96□□□□□ -2.1
HOXD9P28356 RNU6-959P-201ENST00000384671 107 ntBASIC1.96□□□□□ -2.1
HOXD9P28356 SNORA26.9-201ENST00000391322 122 ntBASIC1.96□□□□□ -2.1
HOXD9P28356 MIR1283-2-201ENST00000408621 87 ntBASIC1.96□□□□□ -2.1
HOXD9P28356 AC003989.2-201ENST00000440224 169 ntBASIC1.96□□□□□ -2.1
HOXD9P28356 AC108210.2-201ENST00000503681 201 ntBASIC1.96□□□□□ -2.1
HOXD9P28356 RNU1-40P-201ENST00000516816 164 ntBASIC1.96□□□□□ -2.1
HOXD9P28356 RNU1-97P-201ENST00000516872 164 ntBASIC1.96□□□□□ -2.1
HOXD9P28356 IGLV3-17-201ENST00000519099 244 ntBASIC1.96□□□□□ -2.1
HOXD9P28356 MIR4662B-201ENST00000579498 81 ntBASIC1.96□□□□□ -2.1
HOXD9P28356 AC005786.1-201ENST00000588553 154 ntBASIC1.96□□□□□ -2.1
HOXD9P28356 MIR6840-201ENST00000611937 71 ntBASIC1.96□□□□□ -2.1
HOXD9P28356 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.96□□□□□ -2.1
HOXD9P28356 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
HOXD9P28356 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC1.96□□□□□ -2.1
HOXD9P28356 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC1.95□□□□□ -2.1
HOXD9P28356 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC1.95□□□□□ -2.1
HOXD9P28356 RNU6-199P-201ENST00000362954 107 ntBASIC1.95□□□□□ -2.1
HOXD9P28356 RNU6-23P-201ENST00000363283 107 ntBASIC1.95□□□□□ -2.1
HOXD9P28356 Y_RNA.253-201ENST00000364562 112 ntBASIC1.95□□□□□ -2.1
HOXD9P28356 SNORA8-201ENST00000384574 139 ntBASIC1.95□□□□□ -2.1
HOXD9P28356 RNA5SP323-201ENST00000391094 133 ntBASIC1.95□□□□□ -2.1
HOXD9P28356 SNORA26-201ENST00000391286 122 ntBASIC1.95□□□□□ -2.1
HOXD9P28356 SNORA75.5-201ENST00000391291 81 ntBASIC1.95□□□□□ -2.1
HOXD9P28356 AL445685.2-201ENST00000422551 342 ntBASIC1.95□□□□□ -2.1
HOXD9P28356 NDUFA4P2-201ENST00000489989 244 ntBASIC1.95□□□□□ -2.1
HOXD9P28356 OR9P1P-201ENST00000496431 281 ntBASIC1.95□□□□□ -2.1
HOXD9P28356 AL163195.1-201ENST00000496941 348 ntBASIC1.95□□□□□ -2.1
HOXD9P28356 RNU6-1291P-201ENST00000516591 104 ntBASIC1.95□□□□□ -2.1
HOXD9P28356 RNU7-149P-201ENST00000516739 59 ntBASIC1.95□□□□□ -2.1
HOXD9P28356 AC121758.2-201ENST00000553271 193 ntBASIC1.95□□□□□ -2.1
HOXD9P28356 MIR4769-201ENST00000584126 77 ntBASIC1.95□□□□□ -2.1
HOXD9P28356 JPX_2.1-201ENST00000614161 69 ntBASIC1.95□□□□□ -2.1
HOXD9P28356 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC1.95□□□□□ -2.1
HOXD9P28356 Clostridiales-1.3-201ENST00000637703 147 ntBASIC1.95□□□□□ -2.1
HOXD9P28356 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1.95□□□□□ -2.1
HOXD9P28356 AC008555.8-201ENST00000623602 2168 ntBASIC1.95□□□□□ -2.1
HOXD9P28356 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.94□□□□□ -2.1
HOXD9P28356 Y_RNA.634-201ENST00000364811 113 ntBASIC1.94□□□□□ -2.1
HOXD9P28356 Y_RNA.291-201ENST00000364886 113 ntBASIC1.94□□□□□ -2.1
HOXD9P28356 RNU6-1117P-201ENST00000384525 104 ntBASIC1.94□□□□□ -2.1
HOXD9P28356 MIR597-201ENST00000384968 97 ntBASIC1.94□□□□□ -2.1
HOXD9P28356 SNORA40-201ENST00000388090 126 ntBASIC1.94□□□□□ -2.1
HOXD9P28356 SNORA40.18-201ENST00000391200 128 ntBASIC1.94□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 560.4 ms