Protein–RNA interactions for Protein: P18433

PTPRA, Receptor-type tyrosine-protein phosphatase alpha, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRAP18433 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
PTPRAP18433 ZNF658B-202ENST00000615961 3375 ntBASIC3.04□□□□□ -1.92
PTPRAP18433 AC245060.5-201ENST00000610778 3293 ntBASIC3.04□□□□□ -1.92
PTPRAP18433 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.04□□□□□ -1.92
PTPRAP18433 Y_RNA.99-201ENST00000363138 105 ntBASIC3.04□□□□□ -1.92
PTPRAP18433 RNU6-640P-201ENST00000363693 105 ntBASIC3.04□□□□□ -1.92
PTPRAP18433 Y_RNA.410-201ENST00000383992 113 ntBASIC3.04□□□□□ -1.92
PTPRAP18433 SNORA51.5-201ENST00000384126 131 ntBASIC3.04□□□□□ -1.92
PTPRAP18433 MIR27B-201ENST00000385129 97 ntBASIC3.04□□□□□ -1.92
PTPRAP18433 MIR1302-5-201ENST00000408164 150 ntBASIC3.04□□□□□ -1.92
PTPRAP18433 RNU7-94P-201ENST00000459576 63 ntBASIC3.04□□□□□ -1.92
PTPRAP18433 RPL39P34-201ENST00000477141 156 ntBASIC3.04□□□□□ -1.92
PTPRAP18433 AP004217.1-201ENST00000480579 346 ntBASIC3.04□□□□□ -1.92
PTPRAP18433 AC092185.1-201ENST00000491371 97 ntBASIC3.04□□□□□ -1.92
PTPRAP18433 RN7SL636P-201ENST00000497504 294 ntBASIC3.04□□□□□ -1.92
PTPRAP18433 RNY4P20-201ENST00000516678 93 ntBASIC3.04□□□□□ -1.92
PTPRAP18433 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC3.04□□□□□ -1.92
PTPRAP18433 AC004486.1-201ENST00000546846 233 ntBASIC3.04□□□□□ -1.92
PTPRAP18433 MIR4635-201ENST00000583759 79 ntBASIC3.04□□□□□ -1.92
PTPRAP18433 AC006441.5-201ENST00000612680 209 ntBASIC3.04□□□□□ -1.92
PTPRAP18433 ICE2P2-201ENST00000483823 2787 ntBASIC3.04□□□□□ -1.92
PTPRAP18433 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
PTPRAP18433 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
PTPRAP18433 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC3.03□□□□□ -1.92
PTPRAP18433 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.03□□□□□ -1.92
PTPRAP18433 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.03□□□□□ -1.92
PTPRAP18433 SNORD14E-201ENST00000364009 85 ntBASIC3.03□□□□□ -1.92
PTPRAP18433 RNU6-690P-201ENST00000365242 106 ntBASIC3.03□□□□□ -1.92
PTPRAP18433 RNU6-1014P-201ENST00000383940 103 ntBASIC3.03□□□□□ -1.92
PTPRAP18433 RNU6-442P-201ENST00000383968 104 ntBASIC3.03□□□□□ -1.92
PTPRAP18433 RNU6-1072P-201ENST00000384703 107 ntBASIC3.03□□□□□ -1.92
PTPRAP18433 RNU6-443P-201ENST00000384780 107 ntBASIC3.03□□□□□ -1.92
PTPRAP18433 MIR1262-201ENST00000408276 93 ntBASIC3.03□□□□□ -1.92
PTPRAP18433 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC3.03□□□□□ -1.92
PTPRAP18433 RNU1-131P-201ENST00000458943 161 ntBASIC3.03□□□□□ -1.92
PTPRAP18433 AC006483.1-201ENST00000487308 313 ntBASIC3.03□□□□□ -1.92
PTPRAP18433 AP001318.4-201ENST00000616637 121 ntBASIC3.03□□□□□ -1.92
PTPRAP18433 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC3.03□□□□□ -1.93
PTPRAP18433 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.93
PTPRAP18433 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
PTPRAP18433 AL589743.1-201ENST00000551932 2712 ntBASIC3.02□□□□□ -1.93
PTPRAP18433 RNU6-862P-201ENST00000362804 105 ntBASIC3.02□□□□□ -1.93
PTPRAP18433 U8.2-201ENST00000363156 134 ntBASIC3.02□□□□□ -1.93
PTPRAP18433 Y_RNA.198-201ENST00000364013 98 ntBASIC3.02□□□□□ -1.93
PTPRAP18433 RNU6-268P-201ENST00000364174 107 ntBASIC3.02□□□□□ -1.93
PTPRAP18433 SNORA51.10-201ENST00000384418 136 ntBASIC3.02□□□□□ -1.93
PTPRAP18433 RNU6-160P-201ENST00000384591 107 ntBASIC3.02□□□□□ -1.93
PTPRAP18433 MIR515-2-201ENST00000384883 83 ntBASIC3.02□□□□□ -1.93
PTPRAP18433 MIR515-1-201ENST00000384884 83 ntBASIC3.02□□□□□ -1.93
PTPRAP18433 MIR181B1-201ENST00000385240 110 ntBASIC3.02□□□□□ -1.93
PTPRAP18433 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
PTPRAP18433 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC3.02□□□□□ -1.93
PTPRAP18433 SNORA9.3-201ENST00000516383 129 ntBASIC3.02□□□□□ -1.93
PTPRAP18433 AC024995.1-201ENST00000523014 93 ntBASIC3.02□□□□□ -1.93
PTPRAP18433 MIR3616-201ENST00000584070 92 ntBASIC3.02□□□□□ -1.93
PTPRAP18433 MIR4762-201ENST00000585261 75 ntBASIC3.02□□□□□ -1.93
PTPRAP18433 U4.3-201ENST00000621047 82 ntBASIC3.02□□□□□ -1.93
PTPRAP18433 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
PTPRAP18433 RNU6-349P-201ENST00000362402 107 ntBASIC3.01□□□□□ -1.93
PTPRAP18433 RNU6-1084P-201ENST00000362498 107 ntBASIC3.01□□□□□ -1.93
PTPRAP18433 Y_RNA.37-201ENST00000362606 108 ntBASIC3.01□□□□□ -1.93
PTPRAP18433 Y_RNA.49-201ENST00000362714 112 ntBASIC3.01□□□□□ -1.93
PTPRAP18433 SNORD115-28-201ENST00000363931 81 ntBASIC3.01□□□□□ -1.93
PTPRAP18433 RNU6-461P-201ENST00000364195 107 ntBASIC3.01□□□□□ -1.93
PTPRAP18433 U8.5-201ENST00000364528 136 ntBASIC3.01□□□□□ -1.93
PTPRAP18433 Y_RNA.362-201ENST00000365518 110 ntBASIC3.01□□□□□ -1.93
PTPRAP18433 Y_RNA.547-201ENST00000384654 119 ntBASIC3.01□□□□□ -1.93
PTPRAP18433 CST2P1-201ENST00000425770 87 ntBASIC3.01□□□□□ -1.93
PTPRAP18433 SNRPGP14-201ENST00000435400 219 ntBASIC3.01□□□□□ -1.93
PTPRAP18433 SNORD36C-201ENST00000516733 66 ntBASIC3.01□□□□□ -1.93
PTPRAP18433 Clostridiales-1.3-201ENST00000637703 147 ntBASIC3.01□□□□□ -1.93
PTPRAP18433 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
PTPRAP18433 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
PTPRAP18433 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
PTPRAP18433 ZNF720P1-201ENST00000562403 1939 ntBASIC3□□□□□ -1.93
PTPRAP18433 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3□□□□□ -1.93
PTPRAP18433 Y_RNA.213-201ENST00000364178 111 ntBASIC3□□□□□ -1.93
PTPRAP18433 snoU2-30.1-201ENST00000365012 70 ntBASIC3□□□□□ -1.93
PTPRAP18433 Y_RNA.323-201ENST00000365157 109 ntBASIC3□□□□□ -1.93
PTPRAP18433 MT-TI-201ENST00000387365 69 ntBASIC3□□□□□ -1.93
PTPRAP18433 Z98742.3-201ENST00000418637 326 ntBASIC3□□□□□ -1.93
PTPRAP18433 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3□□□□□ -1.93
PTPRAP18433 AL445646.1-201ENST00000431784 216 ntBASIC3□□□□□ -1.93
PTPRAP18433 RNA5SP281-201ENST00000516504 135 ntBASIC3□□□□□ -1.93
PTPRAP18433 AC021443.1-201ENST00000604478 211 ntBASIC3□□□□□ -1.93
PTPRAP18433 RNU6-94P-201ENST00000607728 107 ntBASIC3□□□□□ -1.93
PTPRAP18433 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
PTPRAP18433 RNY4P6-201ENST00000363667 96 ntBASIC2.99□□□□□ -1.93
PTPRAP18433 RNU6-414P-201ENST00000363705 104 ntBASIC2.99□□□□□ -1.93
PTPRAP18433 RNU6ATAC40P-201ENST00000408580 137 ntBASIC2.99□□□□□ -1.93
PTPRAP18433 RNU4-53P-201ENST00000410828 140 ntBASIC2.99□□□□□ -1.93
PTPRAP18433 RNU6-830P-201ENST00000516353 107 ntBASIC2.99□□□□□ -1.93
PTPRAP18433 SNORD45.4-201ENST00000516629 73 ntBASIC2.99□□□□□ -1.93
PTPRAP18433 RNU7-70P-201ENST00000516941 66 ntBASIC2.99□□□□□ -1.93
PTPRAP18433 AC007536.1-201ENST00000533382 349 ntBASIC2.99□□□□□ -1.93
PTPRAP18433 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.99□□□□□ -1.93
PTPRAP18433 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC2.99□□□□□ -1.93
PTPRAP18433 AC008264.2-201ENST00000610193 3731 ntBASIC2.99□□□□□ -1.93
PTPRAP18433 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.99□□□□□ -1.93
PTPRAP18433 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 169.2 ms