Protein–RNA interactions for Protein: P14543

NID1, Nidogen-1, humanhuman

Predictions only

Length 1,247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NID1P14543 SNORD115-13-201ENST00000363358 82 ntBASIC3.03□□□□□ -1.92
NID1P14543 SNORD115-16-201ENST00000363887 82 ntBASIC3.03□□□□□ -1.92
NID1P14543 SNORD115-1-201ENST00000364961 82 ntBASIC3.03□□□□□ -1.92
NID1P14543 Y_RNA.437-201ENST00000384113 113 ntBASIC3.03□□□□□ -1.92
NID1P14543 RNA5SP229-201ENST00000410809 99 ntBASIC3.03□□□□□ -1.92
NID1P14543 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.03□□□□□ -1.92
NID1P14543 RNU7-171P-201ENST00000459581 62 ntBASIC3.03□□□□□ -1.92
NID1P14543 SNORA64.4-201ENST00000516632 81 ntBASIC3.03□□□□□ -1.92
NID1P14543 Y_RNA.705-201ENST00000516862 110 ntBASIC3.03□□□□□ -1.92
NID1P14543 MIR4276-201ENST00000584832 70 ntBASIC3.03□□□□□ -1.92
NID1P14543 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC3.03□□□□□ -1.92
NID1P14543 MAPK10-322ENST00000641485 4530 ntBASIC3.03□□□□□ -1.92
NID1P14543 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.03□□□□□ -1.92
NID1P14543 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC3.03□□□□□ -1.92
NID1P14543 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.03□□□□□ -1.92
NID1P14543 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC3.03□□□□□ -1.93
NID1P14543 Y_RNA.95-201ENST00000363079 95 ntBASIC3.02□□□□□ -1.93
NID1P14543 Y_RNA.190-201ENST00000363964 101 ntBASIC3.02□□□□□ -1.93
NID1P14543 Y_RNA.313-201ENST00000365095 103 ntBASIC3.02□□□□□ -1.93
NID1P14543 SNORD115-35-201ENST00000365122 82 ntBASIC3.02□□□□□ -1.93
NID1P14543 SNORA27-201ENST00000384323 126 ntBASIC3.02□□□□□ -1.93
NID1P14543 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.02□□□□□ -1.93
NID1P14543 RNU2-48P-201ENST00000410694 191 ntBASIC3.02□□□□□ -1.93
NID1P14543 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC3.02□□□□□ -1.93
NID1P14543 TRIAP1P1-201ENST00000427062 225 ntBASIC3.02□□□□□ -1.93
NID1P14543 ATP5J2P3-201ENST00000451550 258 ntBASIC3.02□□□□□ -1.93
NID1P14543 SCARNA20.6-201ENST00000517251 106 ntBASIC3.02□□□□□ -1.93
NID1P14543 MIR3124-201ENST00000582636 67 ntBASIC3.02□□□□□ -1.93
NID1P14543 AL356280.1-201ENST00000603614 379 ntBASIC3.02□□□□□ -1.93
NID1P14543 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC3.02□□□□□ -1.93
NID1P14543 MIR8057-201ENST00000620957 69 ntBASIC3.02□□□□□ -1.93
NID1P14543 AC021613.1-201ENST00000623880 111 ntBASIC3.02□□□□□ -1.93
NID1P14543 MIR7515-201ENST00000637837 67 ntBASIC3.02□□□□□ -1.93
NID1P14543 AC091304.10-201ENST00000641554 121 ntBASIC3.02□□□□□ -1.93
NID1P14543 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.01□□□□□ -1.93
NID1P14543 SNORD56.3-201ENST00000363507 71 ntBASIC3.01□□□□□ -1.93
NID1P14543 RNU6-805P-201ENST00000365643 106 ntBASIC3.01□□□□□ -1.93
NID1P14543 Y_RNA.377-201ENST00000365644 108 ntBASIC3.01□□□□□ -1.93
NID1P14543 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.01□□□□□ -1.93
NID1P14543 SNORD38C-201ENST00000384381 69 ntBASIC3.01□□□□□ -1.93
NID1P14543 RNU6-24P-201ENST00000384440 107 ntBASIC3.01□□□□□ -1.93
NID1P14543 RNA5SP482-201ENST00000391269 118 ntBASIC3.01□□□□□ -1.93
NID1P14543 RNU6-887P-201ENST00000410660 100 ntBASIC3.01□□□□□ -1.93
NID1P14543 SNORA7.5-201ENST00000410672 110 ntBASIC3.01□□□□□ -1.93
NID1P14543 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC3.01□□□□□ -1.93
NID1P14543 RNU7-96P-201ENST00000459535 64 ntBASIC3.01□□□□□ -1.93
NID1P14543 UBE2DNL-203ENST00000474922 222 ntBASIC3.01□□□□□ -1.93
NID1P14543 AL163195.1-201ENST00000496941 348 ntBASIC3.01□□□□□ -1.93
NID1P14543 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.01□□□□□ -1.93
NID1P14543 Y_RNA.659-201ENST00000515994 113 ntBASIC3.01□□□□□ -1.93
NID1P14543 RNU6-267P-201ENST00000516714 103 ntBASIC3.01□□□□□ -1.93
NID1P14543 AC019288.1-201ENST00000557918 224 ntBASIC3.01□□□□□ -1.93
NID1P14543 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3□□□□□ -1.93
NID1P14543 Z83843.1-201ENST00000604070 3685 ntBASIC3□□□□□ -1.93
NID1P14543 Y_RNA.241-201ENST00000364470 117 ntBASIC3□□□□□ -1.93
NID1P14543 RNU6-219P-201ENST00000364728 107 ntBASIC3□□□□□ -1.93
NID1P14543 RNU6-679P-201ENST00000391003 106 ntBASIC3□□□□□ -1.93
NID1P14543 RNU4-69P-201ENST00000410677 143 ntBASIC3□□□□□ -1.93
NID1P14543 AL353813.1-201ENST00000440700 253 ntBASIC3□□□□□ -1.93
NID1P14543 RN7SL636P-201ENST00000497504 294 ntBASIC3□□□□□ -1.93
NID1P14543 RPL23AP63-201ENST00000498752 471 ntBASIC3□□□□□ -1.93
NID1P14543 RNU6-998P-201ENST00000515894 101 ntBASIC3□□□□□ -1.93
NID1P14543 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC3□□□□□ -1.93
NID1P14543 MIR7112-201ENST00000616126 65 ntBASIC3□□□□□ -1.93
NID1P14543 AC006386.2-201ENST00000624491 75 ntBASIC3□□□□□ -1.93
NID1P14543 AC012005.1-201ENST00000624575 75 ntBASIC3□□□□□ -1.93
NID1P14543 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC2.99□□□□□ -1.93
NID1P14543 AC092435.3-201ENST00000565538 3654 ntBASIC2.99□□□□□ -1.93
NID1P14543 RNA5SP139-201ENST00000364340 117 ntBASIC2.99□□□□□ -1.93
NID1P14543 Y_RNA.426-201ENST00000384068 113 ntBASIC2.99□□□□□ -1.93
NID1P14543 RNU2-63P-201ENST00000410792 194 ntBASIC2.99□□□□□ -1.93
NID1P14543 CST2P1-201ENST00000425770 87 ntBASIC2.99□□□□□ -1.93
NID1P14543 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.99□□□□□ -1.93
NID1P14543 TRBV12-1-201ENST00000479785 344 ntBASIC2.99□□□□□ -1.93
NID1P14543 RNA5SP217-201ENST00000515959 91 ntBASIC2.99□□□□□ -1.93
NID1P14543 RNU1-143P-201ENST00000516296 146 ntBASIC2.99□□□□□ -1.93
NID1P14543 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC2.99□□□□□ -1.93
NID1P14543 U1.23-201ENST00000610293 146 ntBASIC2.99□□□□□ -1.93
NID1P14543 RNU1-68P-201ENST00000615382 146 ntBASIC2.99□□□□□ -1.93
NID1P14543 U1.39-201ENST00000621562 146 ntBASIC2.99□□□□□ -1.93
NID1P14543 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
NID1P14543 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
NID1P14543 AC093908.1-201ENST00000623125 8092 ntBASIC2.99□□□□□ -1.93
NID1P14543 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
NID1P14543 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC2.98□□□□□ -1.93
NID1P14543 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.98□□□□□ -1.93
NID1P14543 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC2.98□□□□□ -1.93
NID1P14543 RNA5SP374-201ENST00000362939 125 ntBASIC2.98□□□□□ -1.93
NID1P14543 Y_RNA.500-201ENST00000384466 111 ntBASIC2.98□□□□□ -1.93
NID1P14543 SNORD77B-201ENST00000391112 67 ntBASIC2.98□□□□□ -1.93
NID1P14543 RNU1-101P-201ENST00000391171 127 ntBASIC2.98□□□□□ -1.93
NID1P14543 RNA5SP293-201ENST00000410527 113 ntBASIC2.98□□□□□ -1.93
NID1P14543 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC2.98□□□□□ -1.93
NID1P14543 AC073261.1-201ENST00000429409 121 ntBASIC2.98□□□□□ -1.93
NID1P14543 RN7SL504P-201ENST00000494496 287 ntBASIC2.98□□□□□ -1.93
NID1P14543 RNU6-1018P-201ENST00000516577 106 ntBASIC2.98□□□□□ -1.93
NID1P14543 RNU7-28P-201ENST00000516759 62 ntBASIC2.98□□□□□ -1.93
NID1P14543 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC2.98□□□□□ -1.93
NID1P14543 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
NID1P14543 RNU6-1201P-201ENST00000384227 107 ntBASIC2.97□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 153.3 ms