Protein–RNA interactions for Protein: P12111

COL6A3, Collagen alpha-3(VI) chain, humanhuman

Predictions only

Length 3,177 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3P12111 RNU6-692P-201ENST00000384496 107 ntBASIC-0.63□□□□□ -2.51
COL6A3P12111 SNORD38B-201ENST00000384690 67 ntBASIC-0.63□□□□□ -2.51
COL6A3P12111 ERLEC1P1-201ENST00000433806 578 ntBASIC-0.63□□□□□ -2.51
COL6A3P12111 MTND2P6-201ENST00000455337 1030 ntBASIC-0.63□□□□□ -2.51
COL6A3P12111 RNU7-55P-201ENST00000459426 62 ntBASIC-0.63□□□□□ -2.51
COL6A3P12111 RPL7P42-201ENST00000481005 679 ntBASIC-0.63□□□□□ -2.51
COL6A3P12111 MIR3912-201ENST00000577566 105 ntBASIC-0.63□□□□□ -2.51
COL6A3P12111 MIR4762-201ENST00000585261 75 ntBASIC-0.63□□□□□ -2.51
COL6A3P12111 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC-0.63□□□□□ -2.51
COL6A3P12111 AL445435.1-201ENST00000604232 665 ntBASIC-0.63□□□□□ -2.51
COL6A3P12111 AC107905.1-201ENST00000616204 426 ntBASIC-0.63□□□□□ -2.51
COL6A3P12111 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC-0.63□□□□□ -2.51
COL6A3P12111 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-0.63□□□□□ -2.51
COL6A3P12111 RNU6-509P-201ENST00000363519 107 ntBASIC-0.63□□□□□ -2.51
COL6A3P12111 RNU6-194P-201ENST00000363862 105 ntBASIC-0.63□□□□□ -2.51
COL6A3P12111 RNU4-28P-201ENST00000364739 141 ntBASIC-0.63□□□□□ -2.51
COL6A3P12111 snoU2-30.1-201ENST00000365012 70 ntBASIC-0.63□□□□□ -2.51
COL6A3P12111 RNU6-1157P-201ENST00000384456 106 ntBASIC-0.63□□□□□ -2.51
COL6A3P12111 UQCRBP2-201ENST00000447827 297 ntBASIC-0.63□□□□□ -2.51
COL6A3P12111 SNORD45.4-201ENST00000516629 73 ntBASIC-0.63□□□□□ -2.51
COL6A3P12111 RNU7-181P-201ENST00000517234 74 ntBASIC-0.63□□□□□ -2.51
COL6A3P12111 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC-0.63□□□□□ -2.51
COL6A3P12111 AC072039.2-201ENST00000608883 439 ntBASIC-0.63□□□□□ -2.51
COL6A3P12111 AC120349.2-201ENST00000625002 298 ntBASIC-0.63□□□□□ -2.51
COL6A3P12111 RNU6-371P-201ENST00000364283 108 ntBASIC-0.63□□□□□ -2.51
COL6A3P12111 Y_RNA.323-201ENST00000365157 109 ntBASIC-0.63□□□□□ -2.51
COL6A3P12111 SNORA1.2-201ENST00000365189 134 ntBASIC-0.63□□□□□ -2.51
COL6A3P12111 RNU6-431P-201ENST00000383874 107 ntBASIC-0.63□□□□□ -2.51
COL6A3P12111 Y_RNA.547-201ENST00000384654 119 ntBASIC-0.63□□□□□ -2.51
COL6A3P12111 MIR617-201ENST00000385030 97 ntBASIC-0.63□□□□□ -2.51
COL6A3P12111 ELOCP17-201ENST00000414751 326 ntBASIC-0.63□□□□□ -2.51
COL6A3P12111 TIMM9P2-201ENST00000419324 266 ntBASIC-0.63□□□□□ -2.51
COL6A3P12111 USP9YP12-201ENST00000450481 570 ntBASIC-0.63□□□□□ -2.51
COL6A3P12111 MTATP6P14-201ENST00000455189 673 ntBASIC-0.63□□□□□ -2.51
COL6A3P12111 AC116353.2-201ENST00000505332 712 ntBASIC-0.63□□□□□ -2.51
COL6A3P12111 RPL39P5-202ENST00000512505 151 ntBASIC-0.63□□□□□ -2.51
COL6A3P12111 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC-0.63□□□□□ -2.51
COL6A3P12111 AC090616.2-202ENST00000584248 222 ntBASIC-0.63□□□□□ -2.51
COL6A3P12111 AC006435.5-201ENST00000624486 112 ntBASIC-0.63□□□□□ -2.51
COL6A3P12111 AC013437.2-201ENST00000639587 677 ntBASIC-0.63□□□□□ -2.51
COL6A3P12111 RNU6-1115P-201ENST00000362490 106 ntBASIC-0.64□□□□□ -2.51
COL6A3P12111 RNU6-511P-201ENST00000363496 107 ntBASIC-0.64□□□□□ -2.51
COL6A3P12111 SNORA24-201ENST00000384096 131 ntBASIC-0.64□□□□□ -2.51
COL6A3P12111 Y_RNA.539-201ENST00000384635 107 ntBASIC-0.64□□□□□ -2.51
COL6A3P12111 RNU6-721P-201ENST00000410155 105 ntBASIC-0.64□□□□□ -2.51
COL6A3P12111 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC-0.64□□□□□ -2.51
COL6A3P12111 AC236972.2-201ENST00000434979 310 ntBASIC-0.64□□□□□ -2.51
COL6A3P12111 EPS15P1-201ENST00000448836 336 ntBASIC-0.64□□□□□ -2.51
COL6A3P12111 RNU6-150P-201ENST00000516237 95 ntBASIC-0.64□□□□□ -2.51
COL6A3P12111 DEFB131E-201ENST00000532329 154 ntBASIC-0.64□□□□□ -2.51
COL6A3P12111 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC-0.64□□□□□ -2.51
COL6A3P12111 AC174048.1-201ENST00000603389 144 ntBASIC-0.64□□□□□ -2.51
COL6A3P12111 MIR4791-201ENST00000607666 84 ntBASIC-0.64□□□□□ -2.51
COL6A3P12111 MIR1264-201ENST00000616374 69 ntBASIC-0.64□□□□□ -2.51
COL6A3P12111 AP002371.2-201ENST00000624450 503 ntBASIC-0.64□□□□□ -2.51
COL6A3P12111 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC-0.64□□□□□ -2.51
COL6A3P12111 SNORA69-201ENST00000383895 132 ntBASIC-0.64□□□□□ -2.51
COL6A3P12111 MTCO2P11-201ENST00000431069 680 ntBASIC-0.64□□□□□ -2.51
COL6A3P12111 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC-0.64□□□□□ -2.51
COL6A3P12111 AC078880.5-201ENST00000617845 421 ntBASIC-0.64□□□□□ -2.51
COL6A3P12111 AC023510.2-201ENST00000622162 746 ntBASIC-0.64□□□□□ -2.51
COL6A3P12111 RNU6-324P-201ENST00000363957 106 ntBASIC-0.65□□□□□ -2.51
COL6A3P12111 Y_RNA.372-201ENST00000365599 102 ntBASIC-0.65□□□□□ -2.51
COL6A3P12111 RNA5SP475-201ENST00000410568 110 ntBASIC-0.65□□□□□ -2.51
COL6A3P12111 RNU6-847P-201ENST00000411115 108 ntBASIC-0.65□□□□□ -2.51
COL6A3P12111 AC018865.2-201ENST00000423631 129 ntBASIC-0.65□□□□□ -2.51
COL6A3P12111 RNU7-140P-201ENST00000459546 60 ntBASIC-0.65□□□□□ -2.51
COL6A3P12111 MRPS18CP4-201ENST00000535821 231 ntBASIC-0.65□□□□□ -2.51
COL6A3P12111 AL391834.2-201ENST00000609982 546 ntBASIC-0.65□□□□□ -2.51
COL6A3P12111 RNU6-353P-201ENST00000364266 108 ntBASIC-0.65□□□□□ -2.51
COL6A3P12111 RNU6-609P-201ENST00000365459 107 ntBASIC-0.65□□□□□ -2.51
COL6A3P12111 MIR487A-201ENST00000385009 80 ntBASIC-0.65□□□□□ -2.51
COL6A3P12111 SNORD12C-201ENST00000386307 89 ntBASIC-0.65□□□□□ -2.51
COL6A3P12111 MTCO3P40-201ENST00000392516 676 ntBASIC-0.65□□□□□ -2.51
COL6A3P12111 MIR548K-201ENST00000408406 116 ntBASIC-0.65□□□□□ -2.51
COL6A3P12111 NDUFAF4P4-201ENST00000454883 502 ntBASIC-0.65□□□□□ -2.51
COL6A3P12111 RPL30P10-201ENST00000488148 337 ntBASIC-0.65□□□□□ -2.51
COL6A3P12111 RNU6-1198P-201ENST00000516904 67 ntBASIC-0.65□□□□□ -2.51
COL6A3P12111 EIF1AXP2-201ENST00000555940 413 ntBASIC-0.65□□□□□ -2.51
COL6A3P12111 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC-0.65□□□□□ -2.51
COL6A3P12111 AC245014.2-201ENST00000603689 287 ntBASIC-0.65□□□□□ -2.51
COL6A3P12111 Y_RNA.5-201ENST00000362334 102 ntBASIC-0.65□□□□□ -2.51
COL6A3P12111 SNORD115-8-201ENST00000363856 82 ntBASIC-0.65□□□□□ -2.51
COL6A3P12111 SNORD115-38-201ENST00000365037 82 ntBASIC-0.65□□□□□ -2.51
COL6A3P12111 Y_RNA.415-201ENST00000384012 112 ntBASIC-0.65□□□□□ -2.51
COL6A3P12111 AL008987.1-201ENST00000415528 237 ntBASIC-0.65□□□□□ -2.51
COL6A3P12111 TPTE2P1-204ENST00000435256 593 ntBASIC-0.65□□□□□ -2.51
COL6A3P12111 AC092925.1-201ENST00000470739 493 ntTSL 3 BASIC-0.65□□□□□ -2.51
COL6A3P12111 AC108019.1-201ENST00000512540 175 ntBASIC-0.65□□□□□ -2.51
COL6A3P12111 SNORA25.13-201ENST00000516395 103 ntBASIC-0.65□□□□□ -2.51
COL6A3P12111 AC107934.1-201ENST00000522215 217 ntBASIC-0.65□□□□□ -2.51
COL6A3P12111 MIR4789-201ENST00000577469 82 ntBASIC-0.65□□□□□ -2.51
COL6A3P12111 POLR3GP1-201ENST00000594073 261 ntBASIC-0.65□□□□□ -2.51
COL6A3P12111 DISC2.1-201ENST00000612827 205 ntBASIC-0.65□□□□□ -2.51
COL6A3P12111 AC132825.7-201ENST00000638744 335 ntBASIC-0.65□□□□□ -2.51
COL6A3P12111 SNORD14E-201ENST00000364009 85 ntBASIC-0.66□□□□□ -2.51
COL6A3P12111 RNU6-900P-201ENST00000384498 102 ntBASIC-0.66□□□□□ -2.51
COL6A3P12111 RNA5SP261-201ENST00000410536 106 ntBASIC-0.66□□□□□ -2.51
COL6A3P12111 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC-0.66□□□□□ -2.51
COL6A3P12111 AL158053.1-201ENST00000441503 453 ntBASIC-0.66□□□□□ -2.51
Retrieved 100 of 98,524 protein–RNA pairs in 107 ms