Protein–RNA interactions for Protein: P08100

RHO, Rhodopsin, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHOP08100 RNU6-197P-201ENST00000516680 100 ntBASIC2.12□□□□□ -2.07
RHOP08100 RNU6-126P-201ENST00000516685 103 ntBASIC2.12□□□□□ -2.07
RHOP08100 AL049861.1-201ENST00000603130 150 ntBASIC2.12□□□□□ -2.07
RHOP08100 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.12□□□□□ -2.07
RHOP08100 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
RHOP08100 Y_RNA.215-201ENST00000364204 112 ntBASIC2.11□□□□□ -2.07
RHOP08100 RNU6-1080P-201ENST00000383982 107 ntBASIC2.11□□□□□ -2.07
RHOP08100 Y_RNA.432-201ENST00000384087 111 ntBASIC2.11□□□□□ -2.07
RHOP08100 MIR518A2-201ENST00000384966 87 ntBASIC2.11□□□□□ -2.07
RHOP08100 HMGN2P39-201ENST00000398005 273 ntBASIC2.11□□□□□ -2.07
RHOP08100 Y_RNA.622-201ENST00000411091 108 ntBASIC2.11□□□□□ -2.07
RHOP08100 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC2.11□□□□□ -2.07
RHOP08100 MIR3646-201ENST00000578301 84 ntBASIC2.11□□□□□ -2.07
RHOP08100 MIR4662B-201ENST00000579498 81 ntBASIC2.11□□□□□ -2.07
RHOP08100 AC087685.1-201ENST00000587507 141 ntBASIC2.11□□□□□ -2.07
RHOP08100 AC069114.2-201ENST00000604699 304 ntBASIC2.11□□□□□ -2.07
RHOP08100 AC245060.5-201ENST00000610778 3293 ntBASIC2.11□□□□□ -2.07
RHOP08100 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
RHOP08100 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC2.1□□□□□ -2.07
RHOP08100 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.1□□□□□ -2.07
RHOP08100 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.1□□□□□ -2.07
RHOP08100 SNORA1B-201ENST00000362535 133 ntBASIC2.1□□□□□ -2.07
RHOP08100 RNU6-151P-201ENST00000364158 107 ntBASIC2.1□□□□□ -2.07
RHOP08100 Y_RNA.267-201ENST00000364679 109 ntBASIC2.1□□□□□ -2.07
RHOP08100 Y_RNA.488-201ENST00000384403 102 ntBASIC2.1□□□□□ -2.07
RHOP08100 SNORA79-201ENST00000408376 140 ntBASIC2.1□□□□□ -2.07
RHOP08100 RPS27P1-201ENST00000450552 247 ntBASIC2.1□□□□□ -2.07
RHOP08100 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.1□□□□□ -2.07
RHOP08100 AC233266.1-201ENST00000454518 96 ntBASIC2.1□□□□□ -2.07
RHOP08100 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC2.1□□□□□ -2.07
RHOP08100 NDUFA4P2-201ENST00000489989 244 ntBASIC2.1□□□□□ -2.07
RHOP08100 RNU6-1299P-201ENST00000516316 100 ntBASIC2.1□□□□□ -2.07
RHOP08100 RNU2-19P-201ENST00000517288 84 ntBASIC2.1□□□□□ -2.07
RHOP08100 AC022217.4-201ENST00000604389 163 ntBASIC2.1□□□□□ -2.07
RHOP08100 AC242852.1-201ENST00000612151 96 ntBASIC2.1□□□□□ -2.07
RHOP08100 AC244015.1-201ENST00000622301 99 ntBASIC2.1□□□□□ -2.07
RHOP08100 AC132825.6-201ENST00000638861 357 ntBASIC2.1□□□□□ -2.07
RHOP08100 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.1□□□□□ -2.07
RHOP08100 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.07
RHOP08100 AL157777.2-201ENST00000258070 137 ntBASIC2.09□□□□□ -2.07
RHOP08100 RNU6-1019P-201ENST00000364424 107 ntBASIC2.09□□□□□ -2.07
RHOP08100 Y_RNA.343-201ENST00000365354 112 ntBASIC2.09□□□□□ -2.07
RHOP08100 RNU6-597P-201ENST00000365620 102 ntBASIC2.09□□□□□ -2.07
RHOP08100 Y_RNA.393-201ENST00000383936 102 ntBASIC2.09□□□□□ -2.07
RHOP08100 MIR569-201ENST00000385228 96 ntBASIC2.09□□□□□ -2.07
RHOP08100 Y_RNA.621-201ENST00000411065 96 ntBASIC2.09□□□□□ -2.07
RHOP08100 AC069257.2-201ENST00000441819 155 ntBASIC2.09□□□□□ -2.07
RHOP08100 AC055731.1-201ENST00000474387 401 ntBASIC2.09□□□□□ -2.07
RHOP08100 OR9P1P-201ENST00000496431 281 ntBASIC2.09□□□□□ -2.07
RHOP08100 RNA5SP182-201ENST00000516064 82 ntBASIC2.09□□□□□ -2.07
RHOP08100 MIR5694-201ENST00000581190 76 ntBASIC2.09□□□□□ -2.07
RHOP08100 AP001485.1-201ENST00000604799 199 ntBASIC2.09□□□□□ -2.07
RHOP08100 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC2.09□□□□□ -2.07
RHOP08100 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC2.09□□□□□ -2.07
RHOP08100 MIR3658-201ENST00000636291 56 ntBASIC2.09□□□□□ -2.07
RHOP08100 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
RHOP08100 MIRLET7G-201ENST00000362280 84 ntBASIC2.08□□□□□ -2.08
RHOP08100 RNU6-978P-201ENST00000364371 103 ntBASIC2.08□□□□□ -2.08
RHOP08100 U8.5-201ENST00000364528 136 ntBASIC2.08□□□□□ -2.08
RHOP08100 Y_RNA.568-201ENST00000384742 113 ntBASIC2.08□□□□□ -2.08
RHOP08100 MIR597-201ENST00000384968 97 ntBASIC2.08□□□□□ -2.08
RHOP08100 SNORA40.18-201ENST00000391200 128 ntBASIC2.08□□□□□ -2.08
RHOP08100 SNRPGP10-201ENST00000432323 225 ntBASIC2.08□□□□□ -2.08
RHOP08100 AC245047.4-201ENST00000433189 144 ntBASIC2.08□□□□□ -2.08
RHOP08100 RNU7-149P-201ENST00000516739 59 ntBASIC2.08□□□□□ -2.08
RHOP08100 MIR548X2-201ENST00000579776 100 ntBASIC2.08□□□□□ -2.08
RHOP08100 MIR378D2-201ENST00000580636 98 ntBASIC2.08□□□□□ -2.08
RHOP08100 MIR5002-201ENST00000584713 97 ntBASIC2.08□□□□□ -2.08
RHOP08100 MIR4762-201ENST00000585261 75 ntBASIC2.08□□□□□ -2.08
RHOP08100 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
RHOP08100 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
RHOP08100 RNU1-17P-201ENST00000363022 152 ntBASIC2.07□□□□□ -2.08
RHOP08100 RNU6-818P-201ENST00000364837 108 ntBASIC2.07□□□□□ -2.08
RHOP08100 RNU4-11P-201ENST00000365287 132 ntBASIC2.07□□□□□ -2.08
RHOP08100 RNU6-768P-201ENST00000384683 107 ntBASIC2.07□□□□□ -2.08
RHOP08100 SNORA48.1-201ENST00000390879 135 ntBASIC2.07□□□□□ -2.08
RHOP08100 RNU6-131P-201ENST00000391144 107 ntBASIC2.07□□□□□ -2.08
RHOP08100 SNORA26-201ENST00000391286 122 ntBASIC2.07□□□□□ -2.08
RHOP08100 AC245047.3-201ENST00000429428 127 ntBASIC2.07□□□□□ -2.08
RHOP08100 AL606517.2-201ENST00000442855 241 ntBASIC2.07□□□□□ -2.08
RHOP08100 Y_RNA.676-201ENST00000516393 96 ntBASIC2.07□□□□□ -2.08
RHOP08100 RNU2-56P-201ENST00000516826 190 ntBASIC2.07□□□□□ -2.08
RHOP08100 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.07□□□□□ -2.08
RHOP08100 MIR6840-201ENST00000611937 71 ntBASIC2.07□□□□□ -2.08
RHOP08100 AL591926.4-201ENST00000616895 298 ntBASIC2.07□□□□□ -2.08
RHOP08100 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.07□□□□□ -2.08
RHOP08100 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.07□□□□□ -2.08
RHOP08100 Y_RNA.242-201ENST00000364473 110 ntBASIC2.06□□□□□ -2.08
RHOP08100 Y_RNA.634-201ENST00000364811 113 ntBASIC2.06□□□□□ -2.08
RHOP08100 RNU6-81P-201ENST00000365608 104 ntBASIC2.06□□□□□ -2.08
RHOP08100 MIR522-201ENST00000385071 87 ntBASIC2.06□□□□□ -2.08
RHOP08100 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
RHOP08100 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
RHOP08100 RNU11-3P-201ENST00000391111 133 ntBASIC2.06□□□□□ -2.08
RHOP08100 SNORA75.5-201ENST00000391291 81 ntBASIC2.06□□□□□ -2.08
RHOP08100 AL445685.2-201ENST00000422551 342 ntBASIC2.06□□□□□ -2.08
RHOP08100 FTH1P12-201ENST00000432137 551 ntBASIC2.06□□□□□ -2.08
RHOP08100 AL049830.1-201ENST00000468034 425 ntBASIC2.06□□□□□ -2.08
RHOP08100 RNU7-28P-201ENST00000516759 62 ntBASIC2.06□□□□□ -2.08
RHOP08100 AC084364.2-201ENST00000546924 395 ntBASIC2.06□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms