Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 MIR3613-201ENST00000579844 87 ntBASIC2.9□□□□□ -1.95
PDGFAP04085 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC2.9□□□□□ -1.95
PDGFAP04085 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
PDGFAP04085 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
PDGFAP04085 MIRLET7C-201ENST00000362160 84 ntBASIC2.89□□□□□ -1.95
PDGFAP04085 Y_RNA.454-201ENST00000384224 113 ntBASIC2.89□□□□□ -1.95
PDGFAP04085 MIR518A2-201ENST00000384966 87 ntBASIC2.89□□□□□ -1.95
PDGFAP04085 AL627390.1-201ENST00000396055 340 ntBASIC2.89□□□□□ -1.95
PDGFAP04085 MIR1283-2-201ENST00000408621 87 ntBASIC2.89□□□□□ -1.95
PDGFAP04085 RNU6-938P-201ENST00000411285 103 ntBASIC2.89□□□□□ -1.95
PDGFAP04085 RNU1-143P-201ENST00000516296 146 ntBASIC2.89□□□□□ -1.95
PDGFAP04085 MIR4778-201ENST00000577635 80 ntBASIC2.89□□□□□ -1.95
PDGFAP04085 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.89□□□□□ -1.95
PDGFAP04085 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.89□□□□□ -1.95
PDGFAP04085 U1.23-201ENST00000610293 146 ntBASIC2.89□□□□□ -1.95
PDGFAP04085 DLEU2_5.2-201ENST00000610606 84 ntBASIC2.89□□□□□ -1.95
PDGFAP04085 RNU1-68P-201ENST00000615382 146 ntBASIC2.89□□□□□ -1.95
PDGFAP04085 U1.39-201ENST00000621562 146 ntBASIC2.89□□□□□ -1.95
PDGFAP04085 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC2.88□□□□□ -1.95
PDGFAP04085 AC008555.8-201ENST00000623602 2168 ntBASIC2.88□□□□□ -1.95
PDGFAP04085 AC017071.1-201ENST00000564407 2204 ntBASIC2.88□□□□□ -1.95
PDGFAP04085 SNORA63D-201ENST00000364359 132 ntBASIC2.88□□□□□ -1.95
PDGFAP04085 RNU6-147P-201ENST00000383983 107 ntBASIC2.88□□□□□ -1.95
PDGFAP04085 RNY1P6-201ENST00000384193 109 ntBASIC2.88□□□□□ -1.95
PDGFAP04085 RNU6-424P-201ENST00000384367 105 ntBASIC2.88□□□□□ -1.95
PDGFAP04085 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC2.88□□□□□ -1.95
PDGFAP04085 AL139132.1-201ENST00000431587 344 ntBASIC2.88□□□□□ -1.95
PDGFAP04085 HMGN2P3-201ENST00000433603 273 ntBASIC2.88□□□□□ -1.95
PDGFAP04085 HMGN2P5-201ENST00000436882 273 ntBASIC2.88□□□□□ -1.95
PDGFAP04085 HSPE1P9-201ENST00000440046 311 ntBASIC2.88□□□□□ -1.95
PDGFAP04085 RPL23AP67-201ENST00000465341 474 ntBASIC2.88□□□□□ -1.95
PDGFAP04085 RNA5SP217-201ENST00000515959 91 ntBASIC2.88□□□□□ -1.95
PDGFAP04085 RNU6-1116P-201ENST00000517269 99 ntBASIC2.88□□□□□ -1.95
PDGFAP04085 GTF3AP2-201ENST00000557014 266 ntBASIC2.88□□□□□ -1.95
PDGFAP04085 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
PDGFAP04085 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
PDGFAP04085 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
PDGFAP04085 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
PDGFAP04085 SNORA71.1-201ENST00000364523 117 ntBASIC2.87□□□□□ -1.95
PDGFAP04085 Y_RNA.351-201ENST00000365436 96 ntBASIC2.87□□□□□ -1.95
PDGFAP04085 EEF1A1P41-201ENST00000414667 207 ntBASIC2.87□□□□□ -1.95
PDGFAP04085 RPL32P35-201ENST00000415214 394 ntBASIC2.87□□□□□ -1.95
PDGFAP04085 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.87□□□□□ -1.95
PDGFAP04085 AC007012.1-201ENST00000567192 175 ntBASIC2.87□□□□□ -1.95
PDGFAP04085 MIR4679-2-201ENST00000578358 77 ntBASIC2.87□□□□□ -1.95
PDGFAP04085 MIR4658-201ENST00000584344 65 ntBASIC2.87□□□□□ -1.95
PDGFAP04085 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC2.86□□□□□ -1.95
PDGFAP04085 RNU6-349P-201ENST00000362402 107 ntBASIC2.86□□□□□ -1.95
PDGFAP04085 RNU6-833P-201ENST00000363486 107 ntBASIC2.86□□□□□ -1.95
PDGFAP04085 MIR520A-201ENST00000384862 85 ntBASIC2.86□□□□□ -1.95
PDGFAP04085 HMGN2P39-201ENST00000398005 273 ntBASIC2.86□□□□□ -1.95
PDGFAP04085 RN7SKP132-201ENST00000516001 208 ntBASIC2.86□□□□□ -1.95
PDGFAP04085 RNU6-830P-201ENST00000516353 107 ntBASIC2.86□□□□□ -1.95
PDGFAP04085 MIR6733-201ENST00000635723 61 ntBASIC2.86□□□□□ -1.95
PDGFAP04085 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
PDGFAP04085 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
PDGFAP04085 AC108206.1-201ENST00000570186 4159 ntBASIC2.85□□□□□ -1.95
PDGFAP04085 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC2.85□□□□□ -1.95
PDGFAP04085 SNORA25.6-201ENST00000364121 118 ntBASIC2.85□□□□□ -1.95
PDGFAP04085 Y_RNA.213-201ENST00000364178 111 ntBASIC2.85□□□□□ -1.95
PDGFAP04085 Y_RNA.281-201ENST00000364774 94 ntBASIC2.85□□□□□ -1.95
PDGFAP04085 SNORA46-201ENST00000384762 135 ntBASIC2.85□□□□□ -1.95
PDGFAP04085 MIR759-201ENST00000390224 91 ntBASIC2.85□□□□□ -1.95
PDGFAP04085 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
PDGFAP04085 SNORD67-201ENST00000390833 111 ntBASIC2.85□□□□□ -1.95
PDGFAP04085 SNORA48.1-201ENST00000390879 135 ntBASIC2.85□□□□□ -1.95
PDGFAP04085 U8.16-201ENST00000391279 133 ntBASIC2.85□□□□□ -1.95
PDGFAP04085 RNU2-7P-201ENST00000410794 178 ntBASIC2.85□□□□□ -1.95
PDGFAP04085 AC015922.2-201ENST00000435593 184 ntBASIC2.85□□□□□ -1.95
PDGFAP04085 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC2.85□□□□□ -1.95
PDGFAP04085 AL135938.1-201ENST00000443141 297 ntBASIC2.85□□□□□ -1.95
PDGFAP04085 UQCRHP3-201ENST00000451503 251 ntBASIC2.85□□□□□ -1.95
PDGFAP04085 MIR3162-201ENST00000581818 82 ntBASIC2.85□□□□□ -1.95
PDGFAP04085 AC021443.1-201ENST00000604478 211 ntBASIC2.85□□□□□ -1.95
PDGFAP04085 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.84□□□□□ -1.95
PDGFAP04085 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.84□□□□□ -1.95
PDGFAP04085 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.84□□□□□ -1.95
PDGFAP04085 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.84□□□□□ -1.95
PDGFAP04085 Y_RNA.198-201ENST00000364013 98 ntBASIC2.84□□□□□ -1.95
PDGFAP04085 U8.17-201ENST00000391292 132 ntBASIC2.84□□□□□ -1.95
PDGFAP04085 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.84□□□□□ -1.95
PDGFAP04085 AL031737.1-201ENST00000450125 223 ntBASIC2.84□□□□□ -1.95
PDGFAP04085 AC108938.1-201ENST00000451204 136 ntBASIC2.84□□□□□ -1.95
PDGFAP04085 RNVU1-2-201ENST00000516326 135 ntBASIC2.84□□□□□ -1.95
PDGFAP04085 RNA5SP168-201ENST00000516642 112 ntBASIC2.84□□□□□ -1.95
PDGFAP04085 RNY4P20-201ENST00000516678 93 ntBASIC2.84□□□□□ -1.95
PDGFAP04085 ZNF861P-201ENST00000588126 639 ntBASIC2.84□□□□□ -1.95
PDGFAP04085 AC091932.4-201ENST00000623386 200 ntBASIC2.84□□□□□ -1.95
PDGFAP04085 MIR622-201ENST00000638396 96 ntBASIC2.84□□□□□ -1.95
PDGFAP04085 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.84□□□□□ -1.96
PDGFAP04085 AL596211.1-201ENST00000569873 2277 ntBASIC2.84□□□□□ -1.96
PDGFAP04085 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.84□□□□□ -1.96
PDGFAP04085 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC2.84□□□□□ -1.96
PDGFAP04085 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
PDGFAP04085 Y_RNA.116-201ENST00000363292 103 ntBASIC2.83□□□□□ -1.96
PDGFAP04085 Y_RNA.241-201ENST00000364470 117 ntBASIC2.83□□□□□ -1.96
PDGFAP04085 SNORD15B-201ENST00000384714 146 ntBASIC2.83□□□□□ -1.96
PDGFAP04085 RNU6-1031P-201ENST00000384773 107 ntBASIC2.83□□□□□ -1.96
PDGFAP04085 RNU7-12P-201ENST00000516030 62 ntBASIC2.83□□□□□ -1.96
PDGFAP04085 SCARNA20.6-201ENST00000517251 106 ntBASIC2.83□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms