Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
COL2A1P02458 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC1.71□□□□□ -2.14
COL2A1P02458 RNU6-1010P-201ENST00000362757 107 ntBASIC1.71□□□□□ -2.14
COL2A1P02458 SNORA63.4-201ENST00000362763 126 ntBASIC1.71□□□□□ -2.14
COL2A1P02458 RNU6-508P-201ENST00000363231 103 ntBASIC1.71□□□□□ -2.14
COL2A1P02458 RNU6-944P-201ENST00000364023 107 ntBASIC1.71□□□□□ -2.14
COL2A1P02458 RNU6-1082P-201ENST00000364574 107 ntBASIC1.71□□□□□ -2.14
COL2A1P02458 SNORA67.1-201ENST00000364749 141 ntBASIC1.71□□□□□ -2.14
COL2A1P02458 Y_RNA.353-201ENST00000365440 108 ntBASIC1.71□□□□□ -2.14
COL2A1P02458 Y_RNA.368-201ENST00000365547 113 ntBASIC1.71□□□□□ -2.14
COL2A1P02458 SNORA20B-201ENST00000384220 132 ntBASIC1.71□□□□□ -2.14
COL2A1P02458 MIR218-1-201ENST00000384999 110 ntBASIC1.71□□□□□ -2.14
COL2A1P02458 SNORA36B-201ENST00000410438 131 ntBASIC1.71□□□□□ -2.14
COL2A1P02458 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.71□□□□□ -2.14
COL2A1P02458 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.71□□□□□ -2.14
COL2A1P02458 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC1.71□□□□□ -2.14
COL2A1P02458 SNRPGP8-201ENST00000454064 226 ntBASIC1.71□□□□□ -2.14
COL2A1P02458 RN7SKP164-201ENST00000516138 266 ntBASIC1.71□□□□□ -2.14
COL2A1P02458 RNU6-1337P-201ENST00000516525 95 ntBASIC1.71□□□□□ -2.14
COL2A1P02458 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.71□□□□□ -2.14
COL2A1P02458 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC1.71□□□□□ -2.14
COL2A1P02458 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC1.71□□□□□ -2.14
COL2A1P02458 MIR4724-201ENST00000579485 89 ntBASIC1.71□□□□□ -2.14
COL2A1P02458 IL33-203ENST00000456383 2501 ntTSL 5 BASIC1.71□□□□□ -2.14
COL2A1P02458 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC1.71□□□□□ -2.14
COL2A1P02458 RNU1-22P-201ENST00000363334 158 ntBASIC1.7□□□□□ -2.14
COL2A1P02458 RNA5SP205-201ENST00000364653 136 ntBASIC1.7□□□□□ -2.14
COL2A1P02458 Y_RNA.337-201ENST00000365312 102 ntBASIC1.7□□□□□ -2.14
COL2A1P02458 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
COL2A1P02458 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
COL2A1P02458 RNA5SP511-201ENST00000410487 115 ntBASIC1.7□□□□□ -2.14
COL2A1P02458 RNU6-57P-201ENST00000411348 103 ntBASIC1.7□□□□□ -2.14
COL2A1P02458 SRIP3-201ENST00000413200 219 ntBASIC1.7□□□□□ -2.14
COL2A1P02458 CYCSP48-201ENST00000417124 323 ntBASIC1.7□□□□□ -2.14
COL2A1P02458 AC097463.2-201ENST00000421074 142 ntBASIC1.7□□□□□ -2.14
COL2A1P02458 AL035461.1-201ENST00000421490 332 ntBASIC1.7□□□□□ -2.14
COL2A1P02458 SNORD65B-201ENST00000459126 73 ntBASIC1.7□□□□□ -2.14
COL2A1P02458 RNU7-23P-201ENST00000459465 62 ntBASIC1.7□□□□□ -2.14
COL2A1P02458 AC107027.2-201ENST00000512197 115 ntBASIC1.7□□□□□ -2.14
COL2A1P02458 RNU5E-3P-201ENST00000515913 68 ntBASIC1.7□□□□□ -2.14
COL2A1P02458 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC1.7□□□□□ -2.14
COL2A1P02458 MIR151B-201ENST00000584249 96 ntBASIC1.7□□□□□ -2.14
COL2A1P02458 POLR3GP1-201ENST00000594073 261 ntBASIC1.7□□□□□ -2.14
COL2A1P02458 AC008739.2-201ENST00000597006 317 ntBASIC1.7□□□□□ -2.14
COL2A1P02458 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.7□□□□□ -2.14
COL2A1P02458 Y_RNA.127-201ENST00000363386 109 ntBASIC1.69□□□□□ -2.14
COL2A1P02458 Y_RNA.178-201ENST00000363832 102 ntBASIC1.69□□□□□ -2.14
COL2A1P02458 RNU1-52P-201ENST00000384190 164 ntBASIC1.69□□□□□ -2.14
COL2A1P02458 MIR616-201ENST00000385293 97 ntBASIC1.69□□□□□ -2.14
COL2A1P02458 MIR1185-2-201ENST00000408687 86 ntBASIC1.69□□□□□ -2.14
COL2A1P02458 RNU6-710P-201ENST00000410424 105 ntBASIC1.69□□□□□ -2.14
COL2A1P02458 AC008267.6-201ENST00000441664 139 ntBASIC1.69□□□□□ -2.14
COL2A1P02458 RPL23AP54-201ENST00000495129 419 ntBASIC1.69□□□□□ -2.14
COL2A1P02458 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC1.69□□□□□ -2.14
COL2A1P02458 SNORD19.2-201ENST00000516978 73 ntBASIC1.69□□□□□ -2.14
COL2A1P02458 RNU1-104P-201ENST00000517280 175 ntBASIC1.69□□□□□ -2.14
COL2A1P02458 MIR3660-201ENST00000584845 100 ntBASIC1.69□□□□□ -2.14
COL2A1P02458 MIR4765-201ENST00000585007 77 ntBASIC1.69□□□□□ -2.14
COL2A1P02458 AL049861.1-201ENST00000603130 150 ntBASIC1.69□□□□□ -2.14
COL2A1P02458 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.69□□□□□ -2.14
COL2A1P02458 MIR367-201ENST00000362299 68 ntBASIC1.69□□□□□ -2.14
COL2A1P02458 U3.8-201ENST00000363675 217 ntBASIC1.69□□□□□ -2.14
COL2A1P02458 RNU6-103P-201ENST00000363686 107 ntBASIC1.69□□□□□ -2.14
COL2A1P02458 RNU6-80P-201ENST00000384195 107 ntBASIC1.69□□□□□ -2.14
COL2A1P02458 Y_RNA.456-201ENST00000384232 111 ntBASIC1.69□□□□□ -2.14
COL2A1P02458 MIR320A-201ENST00000385302 82 ntBASIC1.69□□□□□ -2.14
COL2A1P02458 EIF4EP4-201ENST00000424916 578 ntBASIC1.69□□□□□ -2.14
COL2A1P02458 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.69□□□□□ -2.14
COL2A1P02458 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC1.69□□□□□ -2.14
COL2A1P02458 snoU13.14-201ENST00000459372 104 ntBASIC1.69□□□□□ -2.14
COL2A1P02458 HMGN2P9-201ENST00000476875 229 ntBASIC1.69□□□□□ -2.14
COL2A1P02458 RPS27P26-201ENST00000494583 239 ntBASIC1.69□□□□□ -2.14
COL2A1P02458 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC1.69□□□□□ -2.14
COL2A1P02458 RNU4-57P-201ENST00000515980 135 ntBASIC1.69□□□□□ -2.14
COL2A1P02458 RNU7-115P-201ENST00000516433 55 ntBASIC1.69□□□□□ -2.14
COL2A1P02458 RNU1-92P-201ENST00000517017 135 ntBASIC1.69□□□□□ -2.14
COL2A1P02458 AL078604.3-201ENST00000615580 211 ntBASIC1.69□□□□□ -2.14
COL2A1P02458 Six3os1_7.1-201ENST00000621512 201 ntBASIC1.69□□□□□ -2.14
COL2A1P02458 AC012640.5-201ENST00000623897 319 ntBASIC1.69□□□□□ -2.14
COL2A1P02458 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
COL2A1P02458 MIR6767-201ENST00000637302 66 ntBASIC1.69□□□□□ -2.14
COL2A1P02458 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC1.69□□□□□ -2.14
COL2A1P02458 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC1.68□□□□□ -2.14
COL2A1P02458 AP000648.3-201ENST00000623539 4507 ntBASIC1.68□□□□□ -2.14
COL2A1P02458 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
COL2A1P02458 RNU6-215P-201ENST00000365169 102 ntBASIC1.68□□□□□ -2.14
COL2A1P02458 RNU6-643P-201ENST00000384018 107 ntBASIC1.68□□□□□ -2.14
COL2A1P02458 MIR1304-201ENST00000408243 91 ntBASIC1.68□□□□□ -2.14
COL2A1P02458 Y_RNA.629-201ENST00000411368 105 ntBASIC1.68□□□□□ -2.14
COL2A1P02458 AL365496.1-201ENST00000426885 215 ntBASIC1.68□□□□□ -2.14
COL2A1P02458 TOMM22P2-201ENST00000430735 237 ntBASIC1.68□□□□□ -2.14
COL2A1P02458 RNU7-197P-201ENST00000458836 62 ntBASIC1.68□□□□□ -2.14
COL2A1P02458 RNU6ATAC13P-201ENST00000516152 131 ntBASIC1.68□□□□□ -2.14
COL2A1P02458 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC1.68□□□□□ -2.14
COL2A1P02458 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC1.68□□□□□ -2.14
COL2A1P02458 MIR6129-201ENST00000616087 109 ntBASIC1.68□□□□□ -2.14
COL2A1P02458 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC1.68□□□□□ -2.14
COL2A1P02458 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.67□□□□□ -2.14
COL2A1P02458 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.67□□□□□ -2.14
COL2A1P02458 Y_RNA.30-201ENST00000362572 97 ntBASIC1.67□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 113.8 ms