Protein–RNA interactions for Protein: O94782

USP1, Ubiquitin carboxyl-terminal hydrolase 1, humanhuman

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP1O94782 RPL23AP91-201ENST00000569211 455 ntBASIC2.08□□□□□ -2.08
USP1O94782 MIR4431-201ENST00000579990 94 ntBASIC2.08□□□□□ -2.08
USP1O94782 AC091178.2-201ENST00000584401 117 ntBASIC2.08□□□□□ -2.08
USP1O94782 AL773524.1-201ENST00000614065 229 ntBASIC2.08□□□□□ -2.08
USP1O94782 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.08□□□□□ -2.08
USP1O94782 U2.22-201ENST00000636441 106 ntBASIC2.08□□□□□ -2.08
USP1O94782 AC100821.1-201ENST00000523153 2479 ntBASIC2.08□□□□□ -2.08
USP1O94782 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
USP1O94782 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.07□□□□□ -2.08
USP1O94782 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
USP1O94782 RNU6-674P-201ENST00000363831 107 ntBASIC2.07□□□□□ -2.08
USP1O94782 SNORD45.3-201ENST00000363836 72 ntBASIC2.07□□□□□ -2.08
USP1O94782 Y_RNA.267-201ENST00000364679 109 ntBASIC2.07□□□□□ -2.08
USP1O94782 Y_RNA.357-201ENST00000365487 109 ntBASIC2.07□□□□□ -2.08
USP1O94782 RNU6-449P-201ENST00000383914 107 ntBASIC2.07□□□□□ -2.08
USP1O94782 SNORA19-201ENST00000384737 128 ntBASIC2.07□□□□□ -2.08
USP1O94782 MIR520A-201ENST00000384862 85 ntBASIC2.07□□□□□ -2.08
USP1O94782 RNA5SP323-201ENST00000391094 133 ntBASIC2.07□□□□□ -2.08
USP1O94782 Y_RNA.587-201ENST00000391210 103 ntBASIC2.07□□□□□ -2.08
USP1O94782 ATP6V0E1P3-201ENST00000420036 246 ntBASIC2.07□□□□□ -2.08
USP1O94782 AL606517.2-201ENST00000442855 241 ntBASIC2.07□□□□□ -2.08
USP1O94782 AC233266.1-201ENST00000454518 96 ntBASIC2.07□□□□□ -2.08
USP1O94782 RNA5SP272-201ENST00000516095 111 ntBASIC2.07□□□□□ -2.08
USP1O94782 RNU6-406P-201ENST00000516470 107 ntBASIC2.07□□□□□ -2.08
USP1O94782 AC022254.1-201ENST00000567857 235 ntBASIC2.07□□□□□ -2.08
USP1O94782 MIR3910-1-201ENST00000580936 111 ntBASIC2.07□□□□□ -2.08
USP1O94782 AC242852.1-201ENST00000612151 96 ntBASIC2.07□□□□□ -2.08
USP1O94782 AC244015.1-201ENST00000622301 99 ntBASIC2.07□□□□□ -2.08
USP1O94782 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
USP1O94782 RNU6-151P-201ENST00000364158 107 ntBASIC2.06□□□□□ -2.08
USP1O94782 Y_RNA.796-201ENST00000364268 102 ntBASIC2.06□□□□□ -2.08
USP1O94782 Y_RNA.799-201ENST00000364992 102 ntBASIC2.06□□□□□ -2.08
USP1O94782 RNU6-643P-201ENST00000384018 107 ntBASIC2.06□□□□□ -2.08
USP1O94782 Y_RNA.580-201ENST00000391004 95 ntBASIC2.06□□□□□ -2.08
USP1O94782 RNU6-1228P-201ENST00000391014 107 ntBASIC2.06□□□□□ -2.08
USP1O94782 AC244636.1-201ENST00000421152 228 ntBASIC2.06□□□□□ -2.08
USP1O94782 SNORD11-201ENST00000459124 84 ntBASIC2.06□□□□□ -2.08
USP1O94782 RNU7-94P-201ENST00000459576 63 ntBASIC2.06□□□□□ -2.08
USP1O94782 AC107027.2-201ENST00000512197 115 ntBASIC2.06□□□□□ -2.08
USP1O94782 MIR6079-201ENST00000635807 62 ntBASIC2.06□□□□□ -2.08
USP1O94782 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
USP1O94782 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.06□□□□□ -2.08
USP1O94782 AC018630.2-201ENST00000534866 2403 ntBASIC2.05□□□□□ -2.08
USP1O94782 RNU6-1209P-201ENST00000363655 107 ntBASIC2.05□□□□□ -2.08
USP1O94782 RNU4-11P-201ENST00000365287 132 ntBASIC2.05□□□□□ -2.08
USP1O94782 MIR520G-201ENST00000385064 90 ntBASIC2.05□□□□□ -2.08
USP1O94782 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
USP1O94782 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
USP1O94782 RNU6-239P-201ENST00000390990 99 ntBASIC2.05□□□□□ -2.08
USP1O94782 CYCSP49-201ENST00000420810 319 ntBASIC2.05□□□□□ -2.08
USP1O94782 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC2.05□□□□□ -2.08
USP1O94782 AC005840.1-201ENST00000498412 377 ntBASIC2.05□□□□□ -2.08
USP1O94782 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
USP1O94782 MIR5688-201ENST00000580619 83 ntBASIC2.05□□□□□ -2.08
USP1O94782 MTND1P7-201ENST00000632801 297 ntBASIC2.05□□□□□ -2.08
USP1O94782 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC2.04□□□□□ -2.08
USP1O94782 SNORA1B-201ENST00000362535 133 ntBASIC2.04□□□□□ -2.08
USP1O94782 SNORD114-1-201ENST00000362705 72 ntBASIC2.04□□□□□ -2.08
USP1O94782 Y_RNA.253-201ENST00000364562 112 ntBASIC2.04□□□□□ -2.08
USP1O94782 RNU6-728P-201ENST00000365375 104 ntBASIC2.04□□□□□ -2.08
USP1O94782 RNU6-131P-201ENST00000391144 107 ntBASIC2.04□□□□□ -2.08
USP1O94782 RNA5SP489-201ENST00000410986 109 ntBASIC2.04□□□□□ -2.08
USP1O94782 AL392103.1-201ENST00000447000 198 ntBASIC2.04□□□□□ -2.08
USP1O94782 RPS27P1-201ENST00000450552 247 ntBASIC2.04□□□□□ -2.08
USP1O94782 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.04□□□□□ -2.08
USP1O94782 RNU6-426P-201ENST00000516464 97 ntBASIC2.04□□□□□ -2.08
USP1O94782 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.04□□□□□ -2.08
USP1O94782 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC2.04□□□□□ -2.08
USP1O94782 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.04□□□□□ -2.08
USP1O94782 Y_RNA.778-201ENST00000620203 90 ntBASIC2.04□□□□□ -2.08
USP1O94782 uc_338.20-201ENST00000621563 178 ntBASIC2.04□□□□□ -2.08
USP1O94782 MIR7843-201ENST00000622274 79 ntBASIC2.04□□□□□ -2.08
USP1O94782 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.04□□□□□ -2.08
USP1O94782 MIR219B-201ENST00000637023 88 ntBASIC2.04□□□□□ -2.08
USP1O94782 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.04□□□□□ -2.08
USP1O94782 RNU6-1336P-201ENST00000383886 109 ntBASIC2.03□□□□□ -2.08
USP1O94782 RNU6-484P-201ENST00000384016 107 ntBASIC2.03□□□□□ -2.08
USP1O94782 MIR562-201ENST00000384894 95 ntBASIC2.03□□□□□ -2.08
USP1O94782 SNORA12.1-201ENST00000390873 148 ntBASIC2.03□□□□□ -2.08
USP1O94782 RNA5SP57-201ENST00000459463 123 ntBASIC2.03□□□□□ -2.08
USP1O94782 NDUFA4P2-201ENST00000489989 244 ntBASIC2.03□□□□□ -2.08
USP1O94782 SNORA25.12-201ENST00000516202 82 ntBASIC2.03□□□□□ -2.08
USP1O94782 MIR3935-201ENST00000583472 104 ntBASIC2.03□□□□□ -2.08
USP1O94782 AC022217.4-201ENST00000604389 163 ntBASIC2.03□□□□□ -2.08
USP1O94782 PLD1-217ENST00000627725 174 ntTSL 5 BASIC2.03□□□□□ -2.08
USP1O94782 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.03□□□□□ -2.09
USP1O94782 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
USP1O94782 Y_RNA.91-201ENST00000363042 107 ntBASIC2.02□□□□□ -2.09
USP1O94782 RNY1P11-201ENST00000363759 113 ntBASIC2.02□□□□□ -2.09
USP1O94782 Y_RNA.215-201ENST00000364204 112 ntBASIC2.02□□□□□ -2.09
USP1O94782 Y_RNA.400-201ENST00000383963 111 ntBASIC2.02□□□□□ -2.09
USP1O94782 SNORA64-201ENST00000384674 134 ntBASIC2.02□□□□□ -2.09
USP1O94782 RNU6-768P-201ENST00000384683 107 ntBASIC2.02□□□□□ -2.09
USP1O94782 RNA5SP109-201ENST00000391010 116 ntBASIC2.02□□□□□ -2.09
USP1O94782 RNA5SP496-201ENST00000391240 109 ntBASIC2.02□□□□□ -2.09
USP1O94782 AL023284.1-201ENST00000403956 276 ntBASIC2.02□□□□□ -2.09
USP1O94782 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC2.02□□□□□ -2.09
USP1O94782 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC2.02□□□□□ -2.09
USP1O94782 SNRPGP8-201ENST00000454064 226 ntBASIC2.02□□□□□ -2.09
USP1O94782 RPL23AP63-201ENST00000498752 471 ntBASIC2.02□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 141 ms