Protein–RNA interactions for Protein: H3BM21

Integrin beta (Fragment), humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3BM21 uc_338.14-201ENST00000613162 166 ntBASIC3.41□□□□□ -1.86
H3BM21 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
H3BM21 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.86
H3BM21 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
H3BM21 Y_RNA.567-201ENST00000384736 106 ntBASIC3.4□□□□□ -1.87
H3BM21 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
H3BM21 RNU2-59P-201ENST00000410482 191 ntBASIC3.4□□□□□ -1.87
H3BM21 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC3.4□□□□□ -1.87
H3BM21 AL357552.1-201ENST00000445254 415 ntBASIC3.4□□□□□ -1.87
H3BM21 HMGN2P18-201ENST00000450680 270 ntBASIC3.4□□□□□ -1.87
H3BM21 RNU7-45P-201ENST00000459460 63 ntBASIC3.4□□□□□ -1.87
H3BM21 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC3.4□□□□□ -1.87
H3BM21 SNORA4.4-201ENST00000515921 135 ntBASIC3.4□□□□□ -1.87
H3BM21 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC3.4□□□□□ -1.87
H3BM21 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC3.4□□□□□ -1.87
H3BM21 AC022149.2-201ENST00000621061 203 ntBASIC3.4□□□□□ -1.87
H3BM21 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
H3BM21 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
H3BM21 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
H3BM21 Y_RNA.241-201ENST00000364470 117 ntBASIC3.39□□□□□ -1.87
H3BM21 Y_RNA.336-201ENST00000365307 109 ntBASIC3.39□□□□□ -1.87
H3BM21 RNU6-198P-201ENST00000384258 104 ntBASIC3.39□□□□□ -1.87
H3BM21 Z98742.2-201ENST00000431564 187 ntBASIC3.39□□□□□ -1.87
H3BM21 AC244505.4-201ENST00000434905 287 ntBASIC3.39□□□□□ -1.87
H3BM21 AL135938.1-201ENST00000443141 297 ntBASIC3.39□□□□□ -1.87
H3BM21 SSXP5-201ENST00000443473 287 ntBASIC3.39□□□□□ -1.87
H3BM21 AL109933.2-201ENST00000452651 260 ntBASIC3.39□□□□□ -1.87
H3BM21 SNORD45.4-201ENST00000516629 73 ntBASIC3.39□□□□□ -1.87
H3BM21 SNORA70.19-201ENST00000516717 90 ntBASIC3.39□□□□□ -1.87
H3BM21 RNU6-856P-201ENST00000516959 98 ntBASIC3.39□□□□□ -1.87
H3BM21 NDUFB9P3-201ENST00000521269 501 ntBASIC3.39□□□□□ -1.87
H3BM21 AP002004.2-201ENST00000531656 154 ntBASIC3.39□□□□□ -1.87
H3BM21 MIR4276-201ENST00000584832 70 ntBASIC3.39□□□□□ -1.87
H3BM21 MIR4762-201ENST00000585261 75 ntBASIC3.39□□□□□ -1.87
H3BM21 Z83843.1-201ENST00000604070 3685 ntBASIC3.39□□□□□ -1.87
H3BM21 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.39□□□□□ -1.87
H3BM21 PWAR6-201ENST00000552334 4618 ntBASIC3.39□□□□□ -1.87
H3BM21 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.39□□□□□ -1.87
H3BM21 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
H3BM21 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
H3BM21 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.38□□□□□ -1.87
H3BM21 SNORD115-39-201ENST00000363694 82 ntBASIC3.38□□□□□ -1.87
H3BM21 U8.5-201ENST00000364528 136 ntBASIC3.38□□□□□ -1.87
H3BM21 RNA5SP252-201ENST00000391131 119 ntBASIC3.38□□□□□ -1.87
H3BM21 IGKV2-26-201ENST00000518305 343 ntBASIC3.38□□□□□ -1.87
H3BM21 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC3.38□□□□□ -1.87
H3BM21 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
H3BM21 AL513043.2-201ENST00000573941 143 ntBASIC3.38□□□□□ -1.87
H3BM21 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC3.38□□□□□ -1.87
H3BM21 MIR4425-201ENST00000580572 84 ntBASIC3.38□□□□□ -1.87
H3BM21 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
H3BM21 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
H3BM21 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
H3BM21 AC096644.4-201ENST00000563417 2912 ntBASIC3.37□□□□□ -1.87
H3BM21 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
H3BM21 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.37□□□□□ -1.87
H3BM21 SNORA32-201ENST00000384072 121 ntBASIC3.37□□□□□ -1.87
H3BM21 RNU6-649P-201ENST00000384463 107 ntBASIC3.37□□□□□ -1.87
H3BM21 RNU6-141P-201ENST00000410499 105 ntBASIC3.37□□□□□ -1.87
H3BM21 RNU6-1077P-201ENST00000410506 102 ntBASIC3.37□□□□□ -1.87
H3BM21 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC3.37□□□□□ -1.87
H3BM21 TRIAP1P1-201ENST00000427062 225 ntBASIC3.37□□□□□ -1.87
H3BM21 RNU1-98P-201ENST00000458992 160 ntBASIC3.37□□□□□ -1.87
H3BM21 RNU7-23P-201ENST00000459465 62 ntBASIC3.37□□□□□ -1.87
H3BM21 AC114811.1-201ENST00000507207 168 ntBASIC3.37□□□□□ -1.87
H3BM21 SNORA31.1-201ENST00000515993 133 ntBASIC3.37□□□□□ -1.87
H3BM21 RNU7-2P-201ENST00000516096 62 ntBASIC3.37□□□□□ -1.87
H3BM21 SNORA31.5-201ENST00000516190 133 ntBASIC3.37□□□□□ -1.87
H3BM21 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.37□□□□□ -1.87
H3BM21 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.37□□□□□ -1.87
H3BM21 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC3.37□□□□□ -1.87
H3BM21 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
H3BM21 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.36□□□□□ -1.87
H3BM21 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.36□□□□□ -1.87
H3BM21 MIRLET7A1-201ENST00000362295 80 ntBASIC3.36□□□□□ -1.87
H3BM21 RNU6-624P-201ENST00000363411 107 ntBASIC3.36□□□□□ -1.87
H3BM21 MIR1236-201ENST00000408340 102 ntBASIC3.36□□□□□ -1.87
H3BM21 RNU6-380P-201ENST00000410207 107 ntBASIC3.36□□□□□ -1.87
H3BM21 AC060773.1-201ENST00000421698 310 ntBASIC3.36□□□□□ -1.87
H3BM21 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.36□□□□□ -1.87
H3BM21 RPS29P28-201ENST00000446439 141 ntBASIC3.36□□□□□ -1.87
H3BM21 RNU6-448P-201ENST00000517052 107 ntBASIC3.36□□□□□ -1.87
H3BM21 AC090821.2-201ENST00000523552 176 ntBASIC3.36□□□□□ -1.87
H3BM21 MIR1248-201ENST00000629190 106 ntBASIC3.36□□□□□ -1.87
H3BM21 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
H3BM21 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC3.35□□□□□ -1.87
H3BM21 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.35□□□□□ -1.87
H3BM21 SNORA22.1-201ENST00000362701 134 ntBASIC3.35□□□□□ -1.87
H3BM21 snoU2-30.2-201ENST00000362805 70 ntBASIC3.35□□□□□ -1.87
H3BM21 Y_RNA.494-201ENST00000384432 111 ntBASIC3.35□□□□□ -1.87
H3BM21 RNU6-296P-201ENST00000384608 107 ntBASIC3.35□□□□□ -1.87
H3BM21 SNORA80E-201ENST00000384744 137 ntBASIC3.35□□□□□ -1.87
H3BM21 RNU6-1319P-201ENST00000390855 104 ntBASIC3.35□□□□□ -1.87
H3BM21 RNU6-747P-201ENST00000390928 104 ntBASIC3.35□□□□□ -1.87
H3BM21 RNU6-241P-201ENST00000391148 104 ntBASIC3.35□□□□□ -1.87
H3BM21 RNA5SP467-201ENST00000391274 118 ntBASIC3.35□□□□□ -1.87
H3BM21 RNU6-177P-201ENST00000411257 104 ntBASIC3.35□□□□□ -1.87
H3BM21 AL031183.1-201ENST00000457667 207 ntBASIC3.35□□□□□ -1.87
H3BM21 RNU6-634P-201ENST00000459134 106 ntBASIC3.35□□□□□ -1.87
H3BM21 RNU6-965P-201ENST00000516721 96 ntBASIC3.35□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 164.3 ms