Protein–RNA interactions for Protein: E7ERA6

RNF223, RING finger protein 223, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF223E7ERA6 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
RNF223E7ERA6 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC3.25□□□□□ -1.89
RNF223E7ERA6 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC3.25□□□□□ -1.89
RNF223E7ERA6 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
RNF223E7ERA6 RNU6-540P-201ENST00000384622 101 ntBASIC3.25□□□□□ -1.89
RNF223E7ERA6 MIR635-201ENST00000384830 98 ntBASIC3.25□□□□□ -1.89
RNF223E7ERA6 MIR513A2-201ENST00000385249 127 ntBASIC3.25□□□□□ -1.89
RNF223E7ERA6 RPS29P11-201ENST00000496507 171 ntBASIC3.25□□□□□ -1.89
RNF223E7ERA6 AC022695.1-201ENST00000522089 237 ntBASIC3.25□□□□□ -1.89
RNF223E7ERA6 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.25□□□□□ -1.89
RNF223E7ERA6 MIR3922-201ENST00000585192 84 ntBASIC3.25□□□□□ -1.89
RNF223E7ERA6 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.25□□□□□ -1.89
RNF223E7ERA6 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.25□□□□□ -1.89
RNF223E7ERA6 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC3.25□□□□□ -1.89
RNF223E7ERA6 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
RNF223E7ERA6 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
RNF223E7ERA6 LINC01355-201ENST00000566551 5444 ntBASIC3.25□□□□□ -1.89
RNF223E7ERA6 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
RNF223E7ERA6 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC3.24□□□□□ -1.89
RNF223E7ERA6 NEAT1-202ENST00000501122 22743 ntBASIC3.24□□□□□ -1.89
RNF223E7ERA6 RNU1-15P-201ENST00000353977 144 ntBASIC3.24□□□□□ -1.89
RNF223E7ERA6 RNA5SP295-201ENST00000362655 121 ntBASIC3.24□□□□□ -1.89
RNF223E7ERA6 RNA5SP139-201ENST00000364340 117 ntBASIC3.24□□□□□ -1.89
RNF223E7ERA6 SNORA68.1-201ENST00000364537 132 ntBASIC3.24□□□□□ -1.89
RNF223E7ERA6 RNVU1-14-201ENST00000384770 164 ntBASIC3.24□□□□□ -1.89
RNF223E7ERA6 HSPE1P9-201ENST00000440046 311 ntBASIC3.24□□□□□ -1.89
RNF223E7ERA6 SNORA70.19-201ENST00000516717 90 ntBASIC3.24□□□□□ -1.89
RNF223E7ERA6 SCARNA14-201ENST00000516903 136 ntBASIC3.24□□□□□ -1.89
RNF223E7ERA6 RNU6-711P-201ENST00000517255 106 ntBASIC3.24□□□□□ -1.89
RNF223E7ERA6 SNORD14A-201ENST00000606526 91 ntBASIC3.24□□□□□ -1.89
RNF223E7ERA6 SMCR2_2.1-201ENST00000619783 161 ntBASIC3.24□□□□□ -1.89
RNF223E7ERA6 Z97988.1-201ENST00000637697 135 ntBASIC3.24□□□□□ -1.89
RNF223E7ERA6 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC3.24□□□□□ -1.89
RNF223E7ERA6 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC3.24□□□□□ -1.89
RNF223E7ERA6 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.23□□□□□ -1.89
RNF223E7ERA6 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
RNF223E7ERA6 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
RNF223E7ERA6 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
RNF223E7ERA6 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC3.23□□□□□ -1.89
RNF223E7ERA6 MIR448-201ENST00000362131 111 ntBASIC3.23□□□□□ -1.89
RNF223E7ERA6 RNU6-23P-201ENST00000363283 107 ntBASIC3.23□□□□□ -1.89
RNF223E7ERA6 MIR218-2-201ENST00000385006 110 ntBASIC3.23□□□□□ -1.89
RNF223E7ERA6 MIR1251-201ENST00000408552 70 ntBASIC3.23□□□□□ -1.89
RNF223E7ERA6 Y_RNA.648-201ENST00000459455 110 ntBASIC3.23□□□□□ -1.89
RNF223E7ERA6 AC244505.7-201ENST00000599675 272 ntBASIC3.23□□□□□ -1.89
RNF223E7ERA6 AP000753.3-201ENST00000604083 169 ntBASIC3.23□□□□□ -1.89
RNF223E7ERA6 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.23□□□□□ -1.89
RNF223E7ERA6 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
RNF223E7ERA6 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
RNF223E7ERA6 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
RNF223E7ERA6 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC3.23□□□□□ -1.89
RNF223E7ERA6 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
RNF223E7ERA6 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
RNF223E7ERA6 AL355596.1-201ENST00000565399 3996 ntBASIC3.22□□□□□ -1.89
RNF223E7ERA6 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
RNF223E7ERA6 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
RNF223E7ERA6 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
RNF223E7ERA6 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.22□□□□□ -1.89
RNF223E7ERA6 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
RNF223E7ERA6 SNORD74.4-201ENST00000364129 80 ntBASIC3.22□□□□□ -1.89
RNF223E7ERA6 RNU6-1019P-201ENST00000364424 107 ntBASIC3.22□□□□□ -1.89
RNF223E7ERA6 Y_RNA.264-201ENST00000364665 102 ntBASIC3.22□□□□□ -1.89
RNF223E7ERA6 RNU6-950P-201ENST00000384651 107 ntBASIC3.22□□□□□ -1.89
RNF223E7ERA6 MIR520H-201ENST00000385126 88 ntBASIC3.22□□□□□ -1.89
RNF223E7ERA6 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
RNF223E7ERA6 SNORD77.2-201ENST00000391045 68 ntBASIC3.22□□□□□ -1.89
RNF223E7ERA6 RNA5SP39-201ENST00000411245 120 ntBASIC3.22□□□□□ -1.89
RNF223E7ERA6 CYP4A43P-201ENST00000568156 121 ntBASIC3.22□□□□□ -1.89
RNF223E7ERA6 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.22□□□□□ -1.89
RNF223E7ERA6 MIR7975-201ENST00000619350 68 ntBASIC3.22□□□□□ -1.89
RNF223E7ERA6 AC022513.1-201ENST00000624512 117 ntBASIC3.22□□□□□ -1.89
RNF223E7ERA6 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC3.22□□□□□ -1.89
RNF223E7ERA6 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.22□□□□□ -1.89
RNF223E7ERA6 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
RNF223E7ERA6 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.22□□□□□ -1.89
RNF223E7ERA6 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.21□□□□□ -1.89
RNF223E7ERA6 RNU6-811P-201ENST00000384069 107 ntBASIC3.21□□□□□ -1.9
RNF223E7ERA6 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
RNF223E7ERA6 Y_RNA.596-201ENST00000410462 109 ntBASIC3.21□□□□□ -1.9
RNF223E7ERA6 RPL12P50-201ENST00000603116 116 ntBASIC3.21□□□□□ -1.9
RNF223E7ERA6 SNORA62.6-201ENST00000606322 83 ntBASIC3.21□□□□□ -1.9
RNF223E7ERA6 MIR664A-201ENST00000626086 82 ntBASIC3.21□□□□□ -1.9
RNF223E7ERA6 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
RNF223E7ERA6 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
RNF223E7ERA6 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
RNF223E7ERA6 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
RNF223E7ERA6 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC3.21□□□□□ -1.9
RNF223E7ERA6 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
RNF223E7ERA6 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
RNF223E7ERA6 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
RNF223E7ERA6 AP000648.3-201ENST00000623539 4507 ntBASIC3.2□□□□□ -1.9
RNF223E7ERA6 RNY1P13-201ENST00000365030 105 ntBASIC3.2□□□□□ -1.9
RNF223E7ERA6 RNU4-83P-201ENST00000410863 133 ntBASIC3.2□□□□□ -1.9
RNF223E7ERA6 AC003685.2-201ENST00000422795 395 ntBASIC3.2□□□□□ -1.9
RNF223E7ERA6 AC025445.1-201ENST00000502728 300 ntBASIC3.2□□□□□ -1.9
RNF223E7ERA6 RNU6-303P-201ENST00000517091 106 ntBASIC3.2□□□□□ -1.9
RNF223E7ERA6 AC133485.1-201ENST00000567176 124 ntBASIC3.2□□□□□ -1.9
RNF223E7ERA6 MIR5187-201ENST00000583479 76 ntBASIC3.2□□□□□ -1.9
RNF223E7ERA6 AC069114.2-201ENST00000604699 304 ntBASIC3.2□□□□□ -1.9
RNF223E7ERA6 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 105.6 ms