Protein–RNA interactions for Protein: A4FU49

SH3D21, SH3 domain-containing protein 21, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D21A4FU49 SNORA51.5-201ENST00000384126 131 ntBASIC2.55□□□□□ -2
SH3D21A4FU49 RNU6-905P-201ENST00000384434 107 ntBASIC2.55□□□□□ -2
SH3D21A4FU49 MIR1302-5-201ENST00000408164 150 ntBASIC2.55□□□□□ -2
SH3D21A4FU49 RNA5SP184-201ENST00000411071 108 ntBASIC2.55□□□□□ -2
SH3D21A4FU49 AC087499.2-201ENST00000432861 149 ntBASIC2.55□□□□□ -2
SH3D21A4FU49 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC2.55□□□□□ -2
SH3D21A4FU49 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.55□□□□□ -2
SH3D21A4FU49 RNU1-142P-201ENST00000516682 145 ntBASIC2.55□□□□□ -2
SH3D21A4FU49 RNU6-341P-201ENST00000516973 96 ntBASIC2.55□□□□□ -2
SH3D21A4FU49 Y_RNA.714-201ENST00000517065 90 ntBASIC2.55□□□□□ -2
SH3D21A4FU49 MIR4319-201ENST00000577285 85 ntBASIC2.55□□□□□ -2
SH3D21A4FU49 AL355297.2-201ENST00000604792 129 ntBASIC2.55□□□□□ -2
SH3D21A4FU49 AC245060.5-201ENST00000610778 3293 ntBASIC2.55□□□□□ -2
SH3D21A4FU49 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.55□□□□□ -2
SH3D21A4FU49 MIR376A2-201ENST00000636782 80 ntBASIC2.55□□□□□ -2
SH3D21A4FU49 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.54□□□□□ -2
SH3D21A4FU49 MIR518F-201ENST00000384973 87 ntBASIC2.54□□□□□ -2
SH3D21A4FU49 MIR95-201ENST00000385072 81 ntBASIC2.54□□□□□ -2
SH3D21A4FU49 RNA5SP323-201ENST00000391094 133 ntBASIC2.54□□□□□ -2
SH3D21A4FU49 AL117342.1-201ENST00000404861 406 ntBASIC2.54□□□□□ -2
SH3D21A4FU49 RNU2-48P-201ENST00000410694 191 ntBASIC2.54□□□□□ -2
SH3D21A4FU49 RNA5SP82-201ENST00000516707 92 ntBASIC2.54□□□□□ -2
SH3D21A4FU49 SNORA48.11-201ENST00000517015 89 ntBASIC2.54□□□□□ -2
SH3D21A4FU49 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.54□□□□□ -2
SH3D21A4FU49 AL035470.1-201ENST00000622571 220 ntBASIC2.54□□□□□ -2
SH3D21A4FU49 MIR338-201ENST00000636369 67 ntBASIC2.54□□□□□ -2
SH3D21A4FU49 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.54□□□□□ -2
SH3D21A4FU49 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.54□□□□□ -2
SH3D21A4FU49 MIR449A-201ENST00000362113 91 ntBASIC2.53□□□□□ -2
SH3D21A4FU49 Y_RNA.242-201ENST00000364473 110 ntBASIC2.53□□□□□ -2
SH3D21A4FU49 Y_RNA.328-201ENST00000365208 113 ntBASIC2.53□□□□□ -2
SH3D21A4FU49 Y_RNA.348-201ENST00000365403 103 ntBASIC2.53□□□□□ -2
SH3D21A4FU49 RNU2-63P-201ENST00000410792 194 ntBASIC2.53□□□□□ -2
SH3D21A4FU49 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.53□□□□□ -2
SH3D21A4FU49 RN7SKP132-201ENST00000516001 208 ntBASIC2.53□□□□□ -2
SH3D21A4FU49 ZNF861P-201ENST00000588126 639 ntBASIC2.53□□□□□ -2
SH3D21A4FU49 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.53□□□□□ -2
SH3D21A4FU49 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
SH3D21A4FU49 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.53□□□□□ -2
SH3D21A4FU49 AL589743.1-201ENST00000551932 2712 ntBASIC2.52□□□□□ -2.01
SH3D21A4FU49 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
SH3D21A4FU49 SNORA1B-201ENST00000362535 133 ntBASIC2.52□□□□□ -2.01
SH3D21A4FU49 SNORD68-201ENST00000363214 84 ntBASIC2.52□□□□□ -2.01
SH3D21A4FU49 SNORA33-201ENST00000363664 130 ntBASIC2.52□□□□□ -2.01
SH3D21A4FU49 RNU6-640P-201ENST00000363693 105 ntBASIC2.52□□□□□ -2.01
SH3D21A4FU49 RNU6-1014P-201ENST00000383940 103 ntBASIC2.52□□□□□ -2.01
SH3D21A4FU49 SNORA51.10-201ENST00000384418 136 ntBASIC2.52□□□□□ -2.01
SH3D21A4FU49 MIR522-201ENST00000385071 87 ntBASIC2.52□□□□□ -2.01
SH3D21A4FU49 MIR548O-201ENST00000408583 114 ntBASIC2.52□□□□□ -2.01
SH3D21A4FU49 AL049830.1-201ENST00000468034 425 ntBASIC2.52□□□□□ -2.01
SH3D21A4FU49 RPL39P34-201ENST00000477141 156 ntBASIC2.52□□□□□ -2.01
SH3D21A4FU49 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.52□□□□□ -2.01
SH3D21A4FU49 RNU6-667P-201ENST00000517186 102 ntBASIC2.52□□□□□ -2.01
SH3D21A4FU49 MIR5197-201ENST00000583721 112 ntBASIC2.52□□□□□ -2.01
SH3D21A4FU49 AC087685.1-201ENST00000587507 141 ntBASIC2.52□□□□□ -2.01
SH3D21A4FU49 AP001318.4-201ENST00000616637 121 ntBASIC2.52□□□□□ -2.01
SH3D21A4FU49 U6.108-201ENST00000637764 58 ntBASIC2.52□□□□□ -2.01
SH3D21A4FU49 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
SH3D21A4FU49 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
SH3D21A4FU49 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.51□□□□□ -2.01
SH3D21A4FU49 AC062016.1-201ENST00000355719 319 ntBASIC2.51□□□□□ -2.01
SH3D21A4FU49 SNORA25.6-201ENST00000364121 118 ntBASIC2.51□□□□□ -2.01
SH3D21A4FU49 SNORD73B-201ENST00000364394 72 ntBASIC2.51□□□□□ -2.01
SH3D21A4FU49 RNU6-690P-201ENST00000365242 106 ntBASIC2.51□□□□□ -2.01
SH3D21A4FU49 SNORA2.2-201ENST00000365473 135 ntBASIC2.51□□□□□ -2.01
SH3D21A4FU49 SNORA8-201ENST00000384574 139 ntBASIC2.51□□□□□ -2.01
SH3D21A4FU49 MIR1302-4-201ENST00000408701 150 ntBASIC2.51□□□□□ -2.01
SH3D21A4FU49 AC134878.1-201ENST00000619901 243 ntBASIC2.51□□□□□ -2.01
SH3D21A4FU49 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC2.51□□□□□ -2.01
SH3D21A4FU49 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
SH3D21A4FU49 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
SH3D21A4FU49 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.51□□□□□ -2.01
SH3D21A4FU49 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
SH3D21A4FU49 Y_RNA.49-201ENST00000362714 112 ntBASIC2.5□□□□□ -2.01
SH3D21A4FU49 RNU6-414P-201ENST00000363705 104 ntBASIC2.5□□□□□ -2.01
SH3D21A4FU49 U8.6-201ENST00000364939 135 ntBASIC2.5□□□□□ -2.01
SH3D21A4FU49 RNU6-294P-201ENST00000364999 102 ntBASIC2.5□□□□□ -2.01
SH3D21A4FU49 DEFA7P-201ENST00000382676 285 ntBASIC2.5□□□□□ -2.01
SH3D21A4FU49 RNU6-301P-201ENST00000384277 107 ntBASIC2.5□□□□□ -2.01
SH3D21A4FU49 MIR144-201ENST00000384886 86 ntBASIC2.5□□□□□ -2.01
SH3D21A4FU49 MIR561-201ENST00000385216 97 ntBASIC2.5□□□□□ -2.01
SH3D21A4FU49 FTH1P12-201ENST00000432137 551 ntBASIC2.5□□□□□ -2.01
SH3D21A4FU49 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.5□□□□□ -2.01
SH3D21A4FU49 RNA5SP281-201ENST00000516504 135 ntBASIC2.5□□□□□ -2.01
SH3D21A4FU49 RNY4P20-201ENST00000516678 93 ntBASIC2.5□□□□□ -2.01
SH3D21A4FU49 AL358944.1-201ENST00000528537 144 ntBASIC2.5□□□□□ -2.01
SH3D21A4FU49 AP002004.2-201ENST00000531656 154 ntBASIC2.5□□□□□ -2.01
SH3D21A4FU49 AC091544.4-201ENST00000555268 342 ntBASIC2.5□□□□□ -2.01
SH3D21A4FU49 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
SH3D21A4FU49 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.5□□□□□ -2.01
SH3D21A4FU49 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.5□□□□□ -2.01
SH3D21A4FU49 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
SH3D21A4FU49 MIR6073-201ENST00000352083 89 ntBASIC2.49□□□□□ -2.01
SH3D21A4FU49 RNU6-1084P-201ENST00000362498 107 ntBASIC2.49□□□□□ -2.01
SH3D21A4FU49 Y_RNA.198-201ENST00000364013 98 ntBASIC2.49□□□□□ -2.01
SH3D21A4FU49 Y_RNA.213-201ENST00000364178 111 ntBASIC2.49□□□□□ -2.01
SH3D21A4FU49 RNU6-1131P-201ENST00000364955 107 ntBASIC2.49□□□□□ -2.01
SH3D21A4FU49 RNU6-1189P-201ENST00000383958 107 ntBASIC2.49□□□□□ -2.01
SH3D21A4FU49 AL353689.1-201ENST00000438895 199 ntBASIC2.49□□□□□ -2.01
SH3D21A4FU49 AC011753.1-201ENST00000451001 220 ntBASIC2.49□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 172.1 ms