Protein–RNA interactions for Protein: A0A578

TCRBV5S1A1T, T-cell receptor beta variable 5-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV5S1A1TA0A578 RNU6-484P-201ENST00000384016 107 ntBASIC1.95□□□□□ -2.1
TCRBV5S1A1TA0A578 SNORA70B-201ENST00000384210 135 ntBASIC1.95□□□□□ -2.1
TCRBV5S1A1TA0A578 Y_RNA.488-201ENST00000384403 102 ntBASIC1.95□□□□□ -2.1
TCRBV5S1A1TA0A578 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
TCRBV5S1A1TA0A578 SNORA48.1-201ENST00000390879 135 ntBASIC1.95□□□□□ -2.1
TCRBV5S1A1TA0A578 RNU6-131P-201ENST00000391144 107 ntBASIC1.95□□□□□ -2.1
TCRBV5S1A1TA0A578 RNA5SP482-201ENST00000391269 118 ntBASIC1.95□□□□□ -2.1
TCRBV5S1A1TA0A578 RNU2-70P-201ENST00000410718 179 ntBASIC1.95□□□□□ -2.1
TCRBV5S1A1TA0A578 FTH1P12-201ENST00000432137 551 ntBASIC1.95□□□□□ -2.1
TCRBV5S1A1TA0A578 AC003989.2-201ENST00000440224 169 ntBASIC1.95□□□□□ -2.1
TCRBV5S1A1TA0A578 AL606517.2-201ENST00000442855 241 ntBASIC1.95□□□□□ -2.1
TCRBV5S1A1TA0A578 NDUFA4P2-201ENST00000489989 244 ntBASIC1.95□□□□□ -2.1
TCRBV5S1A1TA0A578 RNU6-406P-201ENST00000516470 107 ntBASIC1.95□□□□□ -2.1
TCRBV5S1A1TA0A578 SNORD116-25-201ENST00000516517 92 ntBASIC1.95□□□□□ -2.1
TCRBV5S1A1TA0A578 IGLV3-17-201ENST00000519099 244 ntBASIC1.95□□□□□ -2.1
TCRBV5S1A1TA0A578 MIR4446-201ENST00000578505 67 ntBASIC1.95□□□□□ -2.1
TCRBV5S1A1TA0A578 AC087685.1-201ENST00000587507 141 ntBASIC1.95□□□□□ -2.1
TCRBV5S1A1TA0A578 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.95□□□□□ -2.1
TCRBV5S1A1TA0A578 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
TCRBV5S1A1TA0A578 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.95□□□□□ -2.1
TCRBV5S1A1TA0A578 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.94□□□□□ -2.1
TCRBV5S1A1TA0A578 RNU6-199P-201ENST00000362954 107 ntBASIC1.94□□□□□ -2.1
TCRBV5S1A1TA0A578 RNU6-704P-201ENST00000364162 103 ntBASIC1.94□□□□□ -2.1
TCRBV5S1A1TA0A578 Y_RNA.265-201ENST00000364677 108 ntBASIC1.94□□□□□ -2.1
TCRBV5S1A1TA0A578 Y_RNA.393-201ENST00000383936 102 ntBASIC1.94□□□□□ -2.1
TCRBV5S1A1TA0A578 MIR522-201ENST00000385071 87 ntBASIC1.94□□□□□ -2.1
TCRBV5S1A1TA0A578 MIR9-3-201ENST00000385084 90 ntBASIC1.94□□□□□ -2.1
TCRBV5S1A1TA0A578 SNORA12.1-201ENST00000390873 148 ntBASIC1.94□□□□□ -2.1
TCRBV5S1A1TA0A578 RNU6-440P-201ENST00000390882 105 ntBASIC1.94□□□□□ -2.1
TCRBV5S1A1TA0A578 AC245047.4-201ENST00000433189 144 ntBASIC1.94□□□□□ -2.1
TCRBV5S1A1TA0A578 UBL5P3-201ENST00000475112 231 ntBASIC1.94□□□□□ -2.1
TCRBV5S1A1TA0A578 RNVU1-2-201ENST00000516326 135 ntBASIC1.94□□□□□ -2.1
TCRBV5S1A1TA0A578 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC1.94□□□□□ -2.1
TCRBV5S1A1TA0A578 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC1.94□□□□□ -2.1
TCRBV5S1A1TA0A578 MIR3646-201ENST00000578301 84 ntBASIC1.94□□□□□ -2.1
TCRBV5S1A1TA0A578 MIR3910-1-201ENST00000580936 111 ntBASIC1.94□□□□□ -2.1
TCRBV5S1A1TA0A578 AP001485.1-201ENST00000604799 199 ntBASIC1.94□□□□□ -2.1
TCRBV5S1A1TA0A578 U1.36-201ENST00000620684 176 ntBASIC1.94□□□□□ -2.1
TCRBV5S1A1TA0A578 MIR8054-201ENST00000620877 86 ntBASIC1.94□□□□□ -2.1
TCRBV5S1A1TA0A578 MIR6844-201ENST00000637122 62 ntBASIC1.94□□□□□ -2.1
TCRBV5S1A1TA0A578 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
TCRBV5S1A1TA0A578 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
TCRBV5S1A1TA0A578 SNORD114-1-201ENST00000362705 72 ntBASIC1.93□□□□□ -2.1
TCRBV5S1A1TA0A578 SNORD68-201ENST00000363214 84 ntBASIC1.93□□□□□ -2.1
TCRBV5S1A1TA0A578 SNORA3A-201ENST00000364113 130 ntBASIC1.93□□□□□ -2.1
TCRBV5S1A1TA0A578 SNORD48-201ENST00000364953 64 ntBASIC1.93□□□□□ -2.1
TCRBV5S1A1TA0A578 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
TCRBV5S1A1TA0A578 SNORD37.2-201ENST00000391075 66 ntBASIC1.93□□□□□ -2.1
TCRBV5S1A1TA0A578 HMGN2P19-201ENST00000425149 265 ntBASIC1.93□□□□□ -2.1
TCRBV5S1A1TA0A578 TMSB4XP3-201ENST00000445144 114 ntBASIC1.93□□□□□ -2.1
TCRBV5S1A1TA0A578 MIR548X2-201ENST00000579776 100 ntBASIC1.93□□□□□ -2.1
TCRBV5S1A1TA0A578 MIR4448-201ENST00000584360 86 ntBASIC1.93□□□□□ -2.1
TCRBV5S1A1TA0A578 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.93□□□□□ -2.1
TCRBV5S1A1TA0A578 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.93□□□□□ -2.1
TCRBV5S1A1TA0A578 SNORA28-201ENST00000606769 126 ntBASIC1.93□□□□□ -2.1
TCRBV5S1A1TA0A578 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC1.93□□□□□ -2.1
TCRBV5S1A1TA0A578 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC1.93□□□□□ -2.1
TCRBV5S1A1TA0A578 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.92□□□□□ -2.1
TCRBV5S1A1TA0A578 SNORA63D-201ENST00000364359 132 ntBASIC1.92□□□□□ -2.1
TCRBV5S1A1TA0A578 SNORA16.1-201ENST00000364597 132 ntBASIC1.92□□□□□ -2.1
TCRBV5S1A1TA0A578 Y_RNA.634-201ENST00000364811 113 ntBASIC1.92□□□□□ -2.1
TCRBV5S1A1TA0A578 RNU4-11P-201ENST00000365287 132 ntBASIC1.92□□□□□ -2.1
TCRBV5S1A1TA0A578 Y_RNA.486-201ENST00000384398 107 ntBASIC1.92□□□□□ -2.1
TCRBV5S1A1TA0A578 RNU6-950P-201ENST00000384651 107 ntBASIC1.92□□□□□ -2.1
TCRBV5S1A1TA0A578 RNU6-768P-201ENST00000384683 107 ntBASIC1.92□□□□□ -2.1
TCRBV5S1A1TA0A578 MIR513C-201ENST00000401352 84 ntBASIC1.92□□□□□ -2.1
TCRBV5S1A1TA0A578 RNA5SP501-201ENST00000410990 112 ntBASIC1.92□□□□□ -2.1
TCRBV5S1A1TA0A578 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.92□□□□□ -2.1
TCRBV5S1A1TA0A578 HMGN2P38-201ENST00000423806 265 ntBASIC1.92□□□□□ -2.1
TCRBV5S1A1TA0A578 RNU6-365P-201ENST00000517113 106 ntBASIC1.92□□□□□ -2.1
TCRBV5S1A1TA0A578 SNORA31.25-201ENST00000517242 134 ntBASIC1.92□□□□□ -2.1
TCRBV5S1A1TA0A578 SUB1P4-201ENST00000566062 339 ntBASIC1.92□□□□□ -2.1
TCRBV5S1A1TA0A578 MIR4529-201ENST00000578110 78 ntBASIC1.92□□□□□ -2.1
TCRBV5S1A1TA0A578 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.92□□□□□ -2.1
TCRBV5S1A1TA0A578 MIR4762-201ENST00000585261 75 ntBASIC1.92□□□□□ -2.1
TCRBV5S1A1TA0A578 AC008507.4-201ENST00000585464 127 ntBASIC1.92□□□□□ -2.1
TCRBV5S1A1TA0A578 AC097639.2-201ENST00000603159 172 ntBASIC1.92□□□□□ -2.1
TCRBV5S1A1TA0A578 MIR3658-201ENST00000636291 56 ntBASIC1.92□□□□□ -2.1
TCRBV5S1A1TA0A578 ZNF702P-202ENST00000434269 1966 ntBASIC1.92□□□□□ -2.1
TCRBV5S1A1TA0A578 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.92□□□□□ -2.1
TCRBV5S1A1TA0A578 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.92□□□□□ -2.1
TCRBV5S1A1TA0A578 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
TCRBV5S1A1TA0A578 RNU6-1084P-201ENST00000362498 107 ntBASIC1.91□□□□□ -2.1
TCRBV5S1A1TA0A578 RNU6-818P-201ENST00000364837 108 ntBASIC1.91□□□□□ -2.1
TCRBV5S1A1TA0A578 RNU6-597P-201ENST00000365620 102 ntBASIC1.91□□□□□ -2.1
TCRBV5S1A1TA0A578 MIR520A-201ENST00000384862 85 ntBASIC1.91□□□□□ -2.1
TCRBV5S1A1TA0A578 RN7SKP200-201ENST00000410564 320 ntBASIC1.91□□□□□ -2.1
TCRBV5S1A1TA0A578 RNU2-7P-201ENST00000410794 178 ntBASIC1.91□□□□□ -2.1
TCRBV5S1A1TA0A578 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
TCRBV5S1A1TA0A578 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC1.91□□□□□ -2.1
TCRBV5S1A1TA0A578 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.91□□□□□ -2.1
TCRBV5S1A1TA0A578 MRPS17P9-201ENST00000511924 393 ntBASIC1.91□□□□□ -2.1
TCRBV5S1A1TA0A578 RNA5SP182-201ENST00000516064 82 ntBASIC1.91□□□□□ -2.1
TCRBV5S1A1TA0A578 RNU7-193P-201ENST00000516723 65 ntBASIC1.91□□□□□ -2.1
TCRBV5S1A1TA0A578 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.91□□□□□ -2.1
TCRBV5S1A1TA0A578 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.9□□□□□ -2.1
TCRBV5S1A1TA0A578 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.9□□□□□ -2.1
TCRBV5S1A1TA0A578 Y_RNA.91-201ENST00000363042 107 ntBASIC1.9□□□□□ -2.11
TCRBV5S1A1TA0A578 RNA5SP393-201ENST00000363423 117 ntBASIC1.9□□□□□ -2.11
TCRBV5S1A1TA0A578 SNORA25.7-201ENST00000364375 127 ntBASIC1.9□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 283.3 ms