Protein–RNA interactions for Protein: A0A0C4DH34

IGHV4-28, Immunoglobulin heavy variable 4-28, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28A0A0C4DH34 RNU6-360P-201ENST00000390944 104 ntBASIC1.62□□□□□ -2.15
IGHV4-28A0A0C4DH34 RN7SKP223-201ENST00000410582 62 ntBASIC1.62□□□□□ -2.15
IGHV4-28A0A0C4DH34 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
IGHV4-28A0A0C4DH34 RPL23AP6-201ENST00000446637 472 ntBASIC1.62□□□□□ -2.15
IGHV4-28A0A0C4DH34 SNORD45.4-201ENST00000516629 73 ntBASIC1.62□□□□□ -2.15
IGHV4-28A0A0C4DH34 MIR1273D-201ENST00000577266 86 ntBASIC1.62□□□□□ -2.15
IGHV4-28A0A0C4DH34 MIR3945-201ENST00000581853 98 ntBASIC1.62□□□□□ -2.15
IGHV4-28A0A0C4DH34 AC087685.1-201ENST00000587507 141 ntBASIC1.62□□□□□ -2.15
IGHV4-28A0A0C4DH34 AC120024.3-201ENST00000603167 156 ntBASIC1.62□□□□□ -2.15
IGHV4-28A0A0C4DH34 AL049779.4-201ENST00000604500 156 ntBASIC1.62□□□□□ -2.15
IGHV4-28A0A0C4DH34 AC104465.1-201ENST00000611365 139 ntBASIC1.62□□□□□ -2.15
IGHV4-28A0A0C4DH34 AL137847.3-201ENST00000611521 109 ntBASIC1.62□□□□□ -2.15
IGHV4-28A0A0C4DH34 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC1.62□□□□□ -2.15
IGHV4-28A0A0C4DH34 AC131280.1-202ENST00000624067 4211 ntBASIC1.61□□□□□ -2.15
IGHV4-28A0A0C4DH34 snoU2-30.1-201ENST00000365012 70 ntBASIC1.61□□□□□ -2.15
IGHV4-28A0A0C4DH34 RNU6-1138P-201ENST00000365359 106 ntBASIC1.61□□□□□ -2.15
IGHV4-28A0A0C4DH34 Y_RNA.357-201ENST00000365487 109 ntBASIC1.61□□□□□ -2.15
IGHV4-28A0A0C4DH34 RNU6-643P-201ENST00000384018 107 ntBASIC1.61□□□□□ -2.15
IGHV4-28A0A0C4DH34 Y_RNA.486-201ENST00000384398 107 ntBASIC1.61□□□□□ -2.15
IGHV4-28A0A0C4DH34 RNU2-70P-201ENST00000410718 179 ntBASIC1.61□□□□□ -2.15
IGHV4-28A0A0C4DH34 RNU2-55P-201ENST00000411146 174 ntBASIC1.61□□□□□ -2.15
IGHV4-28A0A0C4DH34 AC006461.1-201ENST00000412637 326 ntBASIC1.61□□□□□ -2.15
IGHV4-28A0A0C4DH34 CYCTP-201ENST00000504253 315 ntBASIC1.61□□□□□ -2.15
IGHV4-28A0A0C4DH34 AC114811.1-201ENST00000507207 168 ntBASIC1.61□□□□□ -2.15
IGHV4-28A0A0C4DH34 SNORA31.11-201ENST00000516528 139 ntBASIC1.61□□□□□ -2.15
IGHV4-28A0A0C4DH34 MIR4431-201ENST00000579990 94 ntBASIC1.61□□□□□ -2.15
IGHV4-28A0A0C4DH34 MIR6132-201ENST00000622083 109 ntBASIC1.61□□□□□ -2.15
IGHV4-28A0A0C4DH34 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
IGHV4-28A0A0C4DH34 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
IGHV4-28A0A0C4DH34 Y_RNA.91-201ENST00000363042 107 ntBASIC1.6□□□□□ -2.15
IGHV4-28A0A0C4DH34 SNORD14E-201ENST00000364009 85 ntBASIC1.6□□□□□ -2.15
IGHV4-28A0A0C4DH34 MIR144-201ENST00000384886 86 ntBASIC1.6□□□□□ -2.15
IGHV4-28A0A0C4DH34 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.6□□□□□ -2.15
IGHV4-28A0A0C4DH34 SNORA79-201ENST00000408376 140 ntBASIC1.6□□□□□ -2.15
IGHV4-28A0A0C4DH34 RNU7-12P-201ENST00000516030 62 ntBASIC1.6□□□□□ -2.15
IGHV4-28A0A0C4DH34 AC022254.1-201ENST00000567857 235 ntBASIC1.6□□□□□ -2.15
IGHV4-28A0A0C4DH34 MIR4662B-201ENST00000579498 81 ntBASIC1.6□□□□□ -2.15
IGHV4-28A0A0C4DH34 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC1.6□□□□□ -2.15
IGHV4-28A0A0C4DH34 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
IGHV4-28A0A0C4DH34 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.6□□□□□ -2.15
IGHV4-28A0A0C4DH34 MIRLET7G-201ENST00000362280 84 ntBASIC1.59□□□□□ -2.15
IGHV4-28A0A0C4DH34 RNU6-203P-201ENST00000384038 104 ntBASIC1.59□□□□□ -2.15
IGHV4-28A0A0C4DH34 Y_RNA.441-201ENST00000384123 112 ntBASIC1.59□□□□□ -2.15
IGHV4-28A0A0C4DH34 RNU6-804P-201ENST00000384286 107 ntBASIC1.59□□□□□ -2.15
IGHV4-28A0A0C4DH34 SNORA80E-201ENST00000384744 137 ntBASIC1.59□□□□□ -2.15
IGHV4-28A0A0C4DH34 RNU4-43P-201ENST00000410628 137 ntBASIC1.59□□□□□ -2.15
IGHV4-28A0A0C4DH34 RNU6-1135P-201ENST00000411083 103 ntBASIC1.59□□□□□ -2.15
IGHV4-28A0A0C4DH34 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.59□□□□□ -2.15
IGHV4-28A0A0C4DH34 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.59□□□□□ -2.15
IGHV4-28A0A0C4DH34 PGBD4P5-201ENST00000445958 426 ntBASIC1.59□□□□□ -2.15
IGHV4-28A0A0C4DH34 RNU6-197P-201ENST00000516680 100 ntBASIC1.59□□□□□ -2.15
IGHV4-28A0A0C4DH34 IGHVIII-5-1-201ENST00000523059 99 ntBASIC1.59□□□□□ -2.15
IGHV4-28A0A0C4DH34 MIR4778-201ENST00000577635 80 ntBASIC1.59□□□□□ -2.15
IGHV4-28A0A0C4DH34 MIR4713-201ENST00000582691 75 ntBASIC1.59□□□□□ -2.15
IGHV4-28A0A0C4DH34 AL513423.1-201ENST00000621695 132 ntBASIC1.59□□□□□ -2.15
IGHV4-28A0A0C4DH34 SNORD3E-202ENST00000627253 216 ntBASIC1.59□□□□□ -2.15
IGHV4-28A0A0C4DH34 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.59□□□□□ -2.16
IGHV4-28A0A0C4DH34 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC1.58□□□□□ -2.16
IGHV4-28A0A0C4DH34 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC1.58□□□□□ -2.16
IGHV4-28A0A0C4DH34 Y_RNA.8-201ENST00000362353 102 ntBASIC1.58□□□□□ -2.16
IGHV4-28A0A0C4DH34 RNU6-414P-201ENST00000363705 104 ntBASIC1.58□□□□□ -2.16
IGHV4-28A0A0C4DH34 RNU4-84P-201ENST00000364200 139 ntBASIC1.58□□□□□ -2.16
IGHV4-28A0A0C4DH34 Y_RNA.272-201ENST00000364696 102 ntBASIC1.58□□□□□ -2.16
IGHV4-28A0A0C4DH34 Y_RNA.634-201ENST00000364811 113 ntBASIC1.58□□□□□ -2.16
IGHV4-28A0A0C4DH34 RNU6-442P-201ENST00000383968 104 ntBASIC1.58□□□□□ -2.16
IGHV4-28A0A0C4DH34 MIR1261-201ENST00000408659 82 ntBASIC1.58□□□□□ -2.16
IGHV4-28A0A0C4DH34 RPL30P13-201ENST00000418873 348 ntBASIC1.58□□□□□ -2.16
IGHV4-28A0A0C4DH34 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.58□□□□□ -2.16
IGHV4-28A0A0C4DH34 AC093850.1-201ENST00000454121 251 ntBASIC1.58□□□□□ -2.16
IGHV4-28A0A0C4DH34 AC107027.2-201ENST00000512197 115 ntBASIC1.58□□□□□ -2.16
IGHV4-28A0A0C4DH34 MIR4648-201ENST00000580107 72 ntBASIC1.58□□□□□ -2.16
IGHV4-28A0A0C4DH34 MIR5694-201ENST00000581190 76 ntBASIC1.58□□□□□ -2.16
IGHV4-28A0A0C4DH34 AC009831.4-201ENST00000620744 325 ntBASIC1.58□□□□□ -2.16
IGHV4-28A0A0C4DH34 AC027279.3-201ENST00000625055 122 ntBASIC1.58□□□□□ -2.16
IGHV4-28A0A0C4DH34 AC095038.3-201ENST00000634439 195 ntBASIC1.58□□□□□ -2.16
IGHV4-28A0A0C4DH34 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
IGHV4-28A0A0C4DH34 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC1.58□□□□□ -2.16
IGHV4-28A0A0C4DH34 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC1.58□□□□□ -2.16
IGHV4-28A0A0C4DH34 AC005336.3-201ENST00000623833 2679 ntBASIC1.57□□□□□ -2.16
IGHV4-28A0A0C4DH34 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.57□□□□□ -2.16
IGHV4-28A0A0C4DH34 Y_RNA.464-201ENST00000384282 110 ntBASIC1.57□□□□□ -2.16
IGHV4-28A0A0C4DH34 MIR660-201ENST00000385235 97 ntBASIC1.57□□□□□ -2.16
IGHV4-28A0A0C4DH34 MIR891A-201ENST00000401237 79 ntBASIC1.57□□□□□ -2.16
IGHV4-28A0A0C4DH34 AL356379.1-201ENST00000414105 126 ntBASIC1.57□□□□□ -2.16
IGHV4-28A0A0C4DH34 HMGN2P32-201ENST00000444648 269 ntBASIC1.57□□□□□ -2.16
IGHV4-28A0A0C4DH34 AC005840.1-201ENST00000498412 377 ntBASIC1.57□□□□□ -2.16
IGHV4-28A0A0C4DH34 RNU1-41P-201ENST00000516161 162 ntBASIC1.57□□□□□ -2.16
IGHV4-28A0A0C4DH34 Y_RNA.666-201ENST00000516187 112 ntBASIC1.57□□□□□ -2.16
IGHV4-28A0A0C4DH34 RNA5SP200-201ENST00000516360 103 ntBASIC1.57□□□□□ -2.16
IGHV4-28A0A0C4DH34 RNU1-48P-201ENST00000516400 162 ntBASIC1.57□□□□□ -2.16
IGHV4-28A0A0C4DH34 RNA5SP153-201ENST00000516498 76 ntBASIC1.57□□□□□ -2.16
IGHV4-28A0A0C4DH34 RNU6-365P-201ENST00000517113 106 ntBASIC1.57□□□□□ -2.16
IGHV4-28A0A0C4DH34 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC1.57□□□□□ -2.16
IGHV4-28A0A0C4DH34 AC021753.1-201ENST00000635724 168 ntBASIC1.57□□□□□ -2.16
IGHV4-28A0A0C4DH34 Clostridiales-1.3-201ENST00000637703 147 ntBASIC1.57□□□□□ -2.16
IGHV4-28A0A0C4DH34 MIR424-201ENST00000362227 98 ntBASIC1.56□□□□□ -2.16
IGHV4-28A0A0C4DH34 RNU6-661P-201ENST00000362409 107 ntBASIC1.56□□□□□ -2.16
IGHV4-28A0A0C4DH34 RNU6-833P-201ENST00000363486 107 ntBASIC1.56□□□□□ -2.16
IGHV4-28A0A0C4DH34 Y_RNA.242-201ENST00000364473 110 ntBASIC1.56□□□□□ -2.16
IGHV4-28A0A0C4DH34 Y_RNA.336-201ENST00000365307 109 ntBASIC1.56□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 109 ms