Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 MIR515-2-201ENST00000384883 83 ntBASIC2.14□□□□□ -2.07
CCDC187A0A096LP49 MIR515-1-201ENST00000384884 83 ntBASIC2.14□□□□□ -2.07
CCDC187A0A096LP49 SNORD37.2-201ENST00000391075 66 ntBASIC2.14□□□□□ -2.07
CCDC187A0A096LP49 SNORA75.5-201ENST00000391291 81 ntBASIC2.14□□□□□ -2.07
CCDC187A0A096LP49 RNU6-1064P-201ENST00000410626 104 ntBASIC2.14□□□□□ -2.07
CCDC187A0A096LP49 RN7SKP101-201ENST00000411376 320 ntBASIC2.14□□□□□ -2.07
CCDC187A0A096LP49 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC2.14□□□□□ -2.07
CCDC187A0A096LP49 CST2P1-201ENST00000425770 87 ntBASIC2.14□□□□□ -2.07
CCDC187A0A096LP49 AC097462.1-201ENST00000514125 324 ntBASIC2.14□□□□□ -2.07
CCDC187A0A096LP49 RNU6-589P-201ENST00000516485 107 ntBASIC2.14□□□□□ -2.07
CCDC187A0A096LP49 RNU6-1337P-201ENST00000516525 95 ntBASIC2.14□□□□□ -2.07
CCDC187A0A096LP49 AC120024.3-201ENST00000603167 156 ntBASIC2.14□□□□□ -2.07
CCDC187A0A096LP49 AP003357.1-201ENST00000604497 148 ntBASIC2.14□□□□□ -2.07
CCDC187A0A096LP49 AC011603.4-201ENST00000611325 277 ntBASIC2.14□□□□□ -2.07
CCDC187A0A096LP49 MIR6132-201ENST00000622083 109 ntBASIC2.14□□□□□ -2.07
CCDC187A0A096LP49 AL391516.1-201ENST00000554380 2449 ntBASIC2.13□□□□□ -2.07
CCDC187A0A096LP49 SNORD45.3-201ENST00000363836 72 ntBASIC2.13□□□□□ -2.07
CCDC187A0A096LP49 RNU1-96P-201ENST00000364163 162 ntBASIC2.13□□□□□ -2.07
CCDC187A0A096LP49 RNU6-978P-201ENST00000364371 103 ntBASIC2.13□□□□□ -2.07
CCDC187A0A096LP49 SNORA16B-201ENST00000364674 135 ntBASIC2.13□□□□□ -2.07
CCDC187A0A096LP49 RNU6-915P-201ENST00000364943 103 ntBASIC2.13□□□□□ -2.07
CCDC187A0A096LP49 RNU6-1144P-201ENST00000384247 104 ntBASIC2.13□□□□□ -2.07
CCDC187A0A096LP49 MIR597-201ENST00000384968 97 ntBASIC2.13□□□□□ -2.07
CCDC187A0A096LP49 SNORA40.5-201ENST00000391061 128 ntBASIC2.13□□□□□ -2.07
CCDC187A0A096LP49 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.13□□□□□ -2.07
CCDC187A0A096LP49 SNORA36B-201ENST00000410438 131 ntBASIC2.13□□□□□ -2.07
CCDC187A0A096LP49 RNA5SP450-201ENST00000411206 102 ntBASIC2.13□□□□□ -2.07
CCDC187A0A096LP49 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
CCDC187A0A096LP49 RPS27P1-201ENST00000450552 247 ntBASIC2.13□□□□□ -2.07
CCDC187A0A096LP49 SNRPGP8-201ENST00000454064 226 ntBASIC2.13□□□□□ -2.07
CCDC187A0A096LP49 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.13□□□□□ -2.07
CCDC187A0A096LP49 AC117454.1-201ENST00000491120 168 ntBASIC2.13□□□□□ -2.07
CCDC187A0A096LP49 RNU2-56P-201ENST00000516826 190 ntBASIC2.13□□□□□ -2.07
CCDC187A0A096LP49 Y_RNA.709-201ENST00000516952 92 ntBASIC2.13□□□□□ -2.07
CCDC187A0A096LP49 RNU6-548P-201ENST00000517083 115 ntBASIC2.13□□□□□ -2.07
CCDC187A0A096LP49 AL359075.3-201ENST00000613288 217 ntBASIC2.13□□□□□ -2.07
CCDC187A0A096LP49 MIR6129-201ENST00000616087 109 ntBASIC2.13□□□□□ -2.07
CCDC187A0A096LP49 5S_rRNA.13-201ENST00000622298 123 ntBASIC2.13□□□□□ -2.07
CCDC187A0A096LP49 MIR6766-201ENST00000622641 72 ntBASIC2.13□□□□□ -2.07
CCDC187A0A096LP49 MIR6844-201ENST00000637122 62 ntBASIC2.13□□□□□ -2.07
CCDC187A0A096LP49 MIR3914-2-201ENST00000637339 95 ntBASIC2.13□□□□□ -2.07
CCDC187A0A096LP49 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
CCDC187A0A096LP49 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.12□□□□□ -2.07
CCDC187A0A096LP49 AL356292.1-201ENST00000283110 373 ntBASIC2.12□□□□□ -2.07
CCDC187A0A096LP49 MIR367-201ENST00000362299 68 ntBASIC2.12□□□□□ -2.07
CCDC187A0A096LP49 RNU6-862P-201ENST00000362804 105 ntBASIC2.12□□□□□ -2.07
CCDC187A0A096LP49 RNA5SP99-201ENST00000364020 114 ntBASIC2.12□□□□□ -2.07
CCDC187A0A096LP49 Y_RNA.294-201ENST00000364916 102 ntBASIC2.12□□□□□ -2.07
CCDC187A0A096LP49 RNU6-484P-201ENST00000384016 107 ntBASIC2.12□□□□□ -2.07
CCDC187A0A096LP49 RNU6-1323P-201ENST00000384025 107 ntBASIC2.12□□□□□ -2.07
CCDC187A0A096LP49 AC018634.1-201ENST00000437554 401 ntBASIC2.12□□□□□ -2.07
CCDC187A0A096LP49 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
CCDC187A0A096LP49 RPL36AP21-201ENST00000490372 323 ntBASIC2.12□□□□□ -2.07
CCDC187A0A096LP49 AC079804.2-201ENST00000490376 200 ntBASIC2.12□□□□□ -2.07
CCDC187A0A096LP49 CYCTP-201ENST00000504253 315 ntBASIC2.12□□□□□ -2.07
CCDC187A0A096LP49 RN7SKP179-201ENST00000516126 217 ntBASIC2.12□□□□□ -2.07
CCDC187A0A096LP49 RNU7-172P-201ENST00000517125 64 ntBASIC2.12□□□□□ -2.07
CCDC187A0A096LP49 AL353997.5-201ENST00000618886 171 ntBASIC2.12□□□□□ -2.07
CCDC187A0A096LP49 AC022513.1-201ENST00000624512 117 ntBASIC2.12□□□□□ -2.07
CCDC187A0A096LP49 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
CCDC187A0A096LP49 Y_RNA.43-201ENST00000362670 111 ntBASIC2.11□□□□□ -2.07
CCDC187A0A096LP49 RNU6-674P-201ENST00000363831 107 ntBASIC2.11□□□□□ -2.07
CCDC187A0A096LP49 SNORA25.7-201ENST00000364375 127 ntBASIC2.11□□□□□ -2.07
CCDC187A0A096LP49 RNU6-117P-201ENST00000365415 107 ntBASIC2.11□□□□□ -2.07
CCDC187A0A096LP49 RNU6-1336P-201ENST00000383886 109 ntBASIC2.11□□□□□ -2.07
CCDC187A0A096LP49 RNA5SP467-201ENST00000391274 118 ntBASIC2.11□□□□□ -2.07
CCDC187A0A096LP49 AL512604.1-201ENST00000404812 257 ntBASIC2.11□□□□□ -2.07
CCDC187A0A096LP49 RNU6-1186P-201ENST00000410429 97 ntBASIC2.11□□□□□ -2.07
CCDC187A0A096LP49 AC099677.2-201ENST00000436385 175 ntBASIC2.11□□□□□ -2.07
CCDC187A0A096LP49 AL603825.1-201ENST00000438481 80 ntBASIC2.11□□□□□ -2.07
CCDC187A0A096LP49 RNU7-99P-201ENST00000516271 62 ntBASIC2.11□□□□□ -2.07
CCDC187A0A096LP49 RNA5SP200-201ENST00000516360 103 ntBASIC2.11□□□□□ -2.07
CCDC187A0A096LP49 RNU1-142P-201ENST00000516682 145 ntBASIC2.11□□□□□ -2.07
CCDC187A0A096LP49 AC024995.1-201ENST00000523014 93 ntBASIC2.11□□□□□ -2.07
CCDC187A0A096LP49 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.11□□□□□ -2.07
CCDC187A0A096LP49 AC090049.2-201ENST00000550377 109 ntBASIC2.11□□□□□ -2.07
CCDC187A0A096LP49 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC2.11□□□□□ -2.07
CCDC187A0A096LP49 MIR3613-201ENST00000579844 87 ntBASIC2.11□□□□□ -2.07
CCDC187A0A096LP49 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.11□□□□□ -2.07
CCDC187A0A096LP49 AC068647.2-201ENST00000637380 353 ntBASIC2.11□□□□□ -2.07
CCDC187A0A096LP49 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
CCDC187A0A096LP49 AC245060.5-201ENST00000610778 3293 ntBASIC2.11□□□□□ -2.07
CCDC187A0A096LP49 MIR21-201ENST00000362134 72 ntBASIC2.1□□□□□ -2.07
CCDC187A0A096LP49 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
CCDC187A0A096LP49 RNU11-5P-201ENST00000391216 129 ntBASIC2.1□□□□□ -2.07
CCDC187A0A096LP49 CYCSP49-201ENST00000420810 319 ntBASIC2.1□□□□□ -2.07
CCDC187A0A096LP49 RNU6-772P-201ENST00000516042 105 ntBASIC2.1□□□□□ -2.07
CCDC187A0A096LP49 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC2.1□□□□□ -2.07
CCDC187A0A096LP49 AL160236.1-201ENST00000556317 195 ntBASIC2.1□□□□□ -2.07
CCDC187A0A096LP49 MIR378D2-201ENST00000580636 98 ntBASIC2.1□□□□□ -2.07
CCDC187A0A096LP49 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
CCDC187A0A096LP49 AC008555.8-201ENST00000623602 2168 ntBASIC2.09□□□□□ -2.07
CCDC187A0A096LP49 RNU1-51P-201ENST00000365345 176 ntBASIC2.09□□□□□ -2.07
CCDC187A0A096LP49 SNORA67.3-201ENST00000384366 140 ntBASIC2.09□□□□□ -2.07
CCDC187A0A096LP49 Y_RNA.521-201ENST00000384560 114 ntBASIC2.09□□□□□ -2.07
CCDC187A0A096LP49 RNA5SP323-201ENST00000391094 133 ntBASIC2.09□□□□□ -2.07
CCDC187A0A096LP49 AC063976.4-201ENST00000421971 163 ntBASIC2.09□□□□□ -2.07
CCDC187A0A096LP49 RNA5SP458-201ENST00000516188 119 ntBASIC2.09□□□□□ -2.07
CCDC187A0A096LP49 SCARNA16.3-201ENST00000516595 184 ntBASIC2.09□□□□□ -2.07
CCDC187A0A096LP49 RNU7-128P-201ENST00000517247 62 ntBASIC2.09□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 129.7 ms