Protein–RNA interactions for Protein: Q9Y6H5

SNCAIP, Synphilin-1, humanhuman

Predictions only

Length 919 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIPQ9Y6H5 RPL39P40-201ENST00000445481 146 ntBASIC2.96□□□□□ -1.94
SNCAIPQ9Y6H5 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.96□□□□□ -1.94
SNCAIPQ9Y6H5 RN7SL636P-201ENST00000497504 294 ntBASIC2.96□□□□□ -1.94
SNCAIPQ9Y6H5 MRPS17P9-201ENST00000511924 393 ntBASIC2.96□□□□□ -1.94
SNCAIPQ9Y6H5 RNU6-341P-201ENST00000516973 96 ntBASIC2.96□□□□□ -1.94
SNCAIPQ9Y6H5 RNU1-104P-201ENST00000517280 175 ntBASIC2.96□□□□□ -1.94
SNCAIPQ9Y6H5 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
SNCAIPQ9Y6H5 MIR4648-201ENST00000580107 72 ntBASIC2.96□□□□□ -1.94
SNCAIPQ9Y6H5 U6.108-201ENST00000637764 58 ntBASIC2.96□□□□□ -1.94
SNCAIPQ9Y6H5 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.96□□□□□ -1.94
SNCAIPQ9Y6H5 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.96□□□□□ -1.94
SNCAIPQ9Y6H5 ZNF271P-202ENST00000465539 1970 ntBASIC2.96□□□□□ -1.94
SNCAIPQ9Y6H5 MIR126-201ENST00000362291 85 ntBASIC2.95□□□□□ -1.94
SNCAIPQ9Y6H5 RNU6-834P-201ENST00000362367 110 ntBASIC2.95□□□□□ -1.94
SNCAIPQ9Y6H5 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC2.95□□□□□ -1.94
SNCAIPQ9Y6H5 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.95□□□□□ -1.94
SNCAIPQ9Y6H5 RNU6-504P-201ENST00000516568 104 ntBASIC2.95□□□□□ -1.94
SNCAIPQ9Y6H5 Y_RNA.690-201ENST00000516603 95 ntBASIC2.95□□□□□ -1.94
SNCAIPQ9Y6H5 AC022217.4-201ENST00000604389 163 ntBASIC2.95□□□□□ -1.94
SNCAIPQ9Y6H5 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
SNCAIPQ9Y6H5 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.94□□□□□ -1.94
SNCAIPQ9Y6H5 AL117342.1-201ENST00000404861 406 ntBASIC2.94□□□□□ -1.94
SNCAIPQ9Y6H5 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC2.94□□□□□ -1.94
SNCAIPQ9Y6H5 RNU1-131P-201ENST00000458943 161 ntBASIC2.94□□□□□ -1.94
SNCAIPQ9Y6H5 MIR3121-201ENST00000579680 77 ntBASIC2.94□□□□□ -1.94
SNCAIPQ9Y6H5 AL353149.1-201ENST00000610667 244 ntBASIC2.94□□□□□ -1.94
SNCAIPQ9Y6H5 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.94□□□□□ -1.94
SNCAIPQ9Y6H5 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC2.94□□□□□ -1.94
SNCAIPQ9Y6H5 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.94□□□□□ -1.94
SNCAIPQ9Y6H5 Y_RNA.66-201ENST00000362862 102 ntBASIC2.93□□□□□ -1.94
SNCAIPQ9Y6H5 Y_RNA.114-201ENST00000363265 113 ntBASIC2.93□□□□□ -1.94
SNCAIPQ9Y6H5 Y_RNA.563-201ENST00000384707 108 ntBASIC2.93□□□□□ -1.94
SNCAIPQ9Y6H5 MIR764-201ENST00000390811 85 ntBASIC2.93□□□□□ -1.94
SNCAIPQ9Y6H5 SNORD72-201ENST00000390994 80 ntBASIC2.93□□□□□ -1.94
SNCAIPQ9Y6H5 AL359511.1-201ENST00000402970 211 ntBASIC2.93□□□□□ -1.94
SNCAIPQ9Y6H5 RNU6-1064P-201ENST00000410626 104 ntBASIC2.93□□□□□ -1.94
SNCAIPQ9Y6H5 RNA5SP127-201ENST00000411051 133 ntBASIC2.93□□□□□ -1.94
SNCAIPQ9Y6H5 AL158823.1-201ENST00000418441 478 ntBASIC2.93□□□□□ -1.94
SNCAIPQ9Y6H5 AC018634.1-201ENST00000437554 401 ntBASIC2.93□□□□□ -1.94
SNCAIPQ9Y6H5 AL158147.1-201ENST00000443970 75 ntBASIC2.93□□□□□ -1.94
SNCAIPQ9Y6H5 AC104389.3-201ENST00000445629 235 ntBASIC2.93□□□□□ -1.94
SNCAIPQ9Y6H5 AL049830.1-201ENST00000468034 425 ntBASIC2.93□□□□□ -1.94
SNCAIPQ9Y6H5 AC234781.5-201ENST00000508429 271 ntBASIC2.93□□□□□ -1.94
SNCAIPQ9Y6H5 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.93□□□□□ -1.94
SNCAIPQ9Y6H5 AC133485.4-201ENST00000561835 220 ntBASIC2.93□□□□□ -1.94
SNCAIPQ9Y6H5 AC138907.4-201ENST00000570107 226 ntBASIC2.93□□□□□ -1.94
SNCAIPQ9Y6H5 MIR3129-201ENST00000581095 76 ntBASIC2.93□□□□□ -1.94
SNCAIPQ9Y6H5 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.93□□□□□ -1.94
SNCAIPQ9Y6H5 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
SNCAIPQ9Y6H5 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.92□□□□□ -1.94
SNCAIPQ9Y6H5 RNU6-862P-201ENST00000362804 105 ntBASIC2.92□□□□□ -1.94
SNCAIPQ9Y6H5 SNORA38-201ENST00000363946 132 ntBASIC2.92□□□□□ -1.94
SNCAIPQ9Y6H5 RNU6-309P-201ENST00000364573 106 ntBASIC2.92□□□□□ -1.94
SNCAIPQ9Y6H5 MIR1289-2-201ENST00000408360 111 ntBASIC2.92□□□□□ -1.94
SNCAIPQ9Y6H5 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC2.92□□□□□ -1.94
SNCAIPQ9Y6H5 AL163195.1-201ENST00000496941 348 ntBASIC2.92□□□□□ -1.94
SNCAIPQ9Y6H5 RNU6-1061P-201ENST00000516530 99 ntBASIC2.92□□□□□ -1.94
SNCAIPQ9Y6H5 Y_RNA.714-201ENST00000517065 90 ntBASIC2.92□□□□□ -1.94
SNCAIPQ9Y6H5 AC007751.1-201ENST00000529260 376 ntBASIC2.92□□□□□ -1.94
SNCAIPQ9Y6H5 AL591926.4-201ENST00000616895 298 ntBASIC2.92□□□□□ -1.94
SNCAIPQ9Y6H5 MIR6733-201ENST00000635723 61 ntBASIC2.92□□□□□ -1.94
SNCAIPQ9Y6H5 AC131280.1-202ENST00000624067 4211 ntBASIC2.92□□□□□ -1.94
SNCAIPQ9Y6H5 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
SNCAIPQ9Y6H5 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
SNCAIPQ9Y6H5 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.94
SNCAIPQ9Y6H5 AL161431.1-201ENST00000618966 4205 ntBASIC2.91□□□□□ -1.94
SNCAIPQ9Y6H5 SNORD115-3-201ENST00000363100 82 ntBASIC2.91□□□□□ -1.94
SNCAIPQ9Y6H5 VTRNA1-1-201ENST00000363120 99 ntBASIC2.91□□□□□ -1.94
SNCAIPQ9Y6H5 RNU6-508P-201ENST00000363231 103 ntBASIC2.91□□□□□ -1.94
SNCAIPQ9Y6H5 SNORA1-201ENST00000384107 130 ntBASIC2.91□□□□□ -1.94
SNCAIPQ9Y6H5 AL603914.1-201ENST00000401964 204 ntBASIC2.91□□□□□ -1.94
SNCAIPQ9Y6H5 HMGN2P35-201ENST00000412164 270 ntBASIC2.91□□□□□ -1.94
SNCAIPQ9Y6H5 SUMO1P4-201ENST00000429430 302 ntBASIC2.91□□□□□ -1.94
SNCAIPQ9Y6H5 snoU13.23-201ENST00000458863 104 ntBASIC2.91□□□□□ -1.94
SNCAIPQ9Y6H5 RNU6-772P-201ENST00000516042 105 ntBASIC2.91□□□□□ -1.94
SNCAIPQ9Y6H5 Y_RNA.712-201ENST00000517011 92 ntBASIC2.91□□□□□ -1.94
SNCAIPQ9Y6H5 RNU6-1270P-201ENST00000517128 108 ntBASIC2.91□□□□□ -1.94
SNCAIPQ9Y6H5 RNU2-60P-201ENST00000517290 128 ntBASIC2.91□□□□□ -1.94
SNCAIPQ9Y6H5 AL358944.1-201ENST00000528537 144 ntBASIC2.91□□□□□ -1.94
SNCAIPQ9Y6H5 MTND5P34-201ENST00000568888 325 ntBASIC2.91□□□□□ -1.94
SNCAIPQ9Y6H5 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
SNCAIPQ9Y6H5 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.9□□□□□ -1.94
SNCAIPQ9Y6H5 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.94
SNCAIPQ9Y6H5 SNORA1B-201ENST00000362535 133 ntBASIC2.9□□□□□ -1.95
SNCAIPQ9Y6H5 Y_RNA.52-201ENST00000362760 96 ntBASIC2.9□□□□□ -1.95
SNCAIPQ9Y6H5 RNA5SP493-201ENST00000364115 91 ntBASIC2.9□□□□□ -1.95
SNCAIPQ9Y6H5 SNORD61-201ENST00000384252 73 ntBASIC2.9□□□□□ -1.95
SNCAIPQ9Y6H5 RNU6-476P-201ENST00000384726 107 ntBASIC2.9□□□□□ -1.95
SNCAIPQ9Y6H5 MIR515-2-201ENST00000384883 83 ntBASIC2.9□□□□□ -1.95
SNCAIPQ9Y6H5 MIR515-1-201ENST00000384884 83 ntBASIC2.9□□□□□ -1.95
SNCAIPQ9Y6H5 MIR624-201ENST00000385217 97 ntBASIC2.9□□□□□ -1.95
SNCAIPQ9Y6H5 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC2.9□□□□□ -1.95
SNCAIPQ9Y6H5 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.9□□□□□ -1.95
SNCAIPQ9Y6H5 AL356320.1-201ENST00000429616 163 ntBASIC2.9□□□□□ -1.95
SNCAIPQ9Y6H5 RNU7-94P-201ENST00000459576 63 ntBASIC2.9□□□□□ -1.95
SNCAIPQ9Y6H5 RN7SL499P-201ENST00000481141 276 ntBASIC2.9□□□□□ -1.95
SNCAIPQ9Y6H5 Y_RNA.666-201ENST00000516187 112 ntBASIC2.9□□□□□ -1.95
SNCAIPQ9Y6H5 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.9□□□□□ -1.95
SNCAIPQ9Y6H5 AC008507.4-201ENST00000585464 127 ntBASIC2.9□□□□□ -1.95
SNCAIPQ9Y6H5 AL365205.2-201ENST00000594586 68 ntBASIC2.9□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 973.6 ms