Protein–RNA interactions for Protein: Q9Y5Z7

HCFC2, Host cell factor 2, humanhuman

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2Q9Y5Z7 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
HCFC2Q9Y5Z7 Y_RNA.253-201ENST00000364562 112 ntBASIC2.68□□□□□ -1.98
HCFC2Q9Y5Z7 SNORA22-201ENST00000383907 134 ntBASIC2.68□□□□□ -1.98
HCFC2Q9Y5Z7 AL591806.2-201ENST00000433122 173 ntBASIC2.68□□□□□ -1.98
HCFC2Q9Y5Z7 RN7SL636P-201ENST00000497504 294 ntBASIC2.68□□□□□ -1.98
HCFC2Q9Y5Z7 MRPS17P9-201ENST00000511924 393 ntBASIC2.68□□□□□ -1.98
HCFC2Q9Y5Z7 RNA5SP236-201ENST00000516169 116 ntBASIC2.68□□□□□ -1.98
HCFC2Q9Y5Z7 MIR3613-201ENST00000579844 87 ntBASIC2.68□□□□□ -1.98
HCFC2Q9Y5Z7 MIR4648-201ENST00000580107 72 ntBASIC2.68□□□□□ -1.98
HCFC2Q9Y5Z7 AC008507.4-201ENST00000585464 127 ntBASIC2.68□□□□□ -1.98
HCFC2Q9Y5Z7 AC108081.1-201ENST00000604358 221 ntBASIC2.68□□□□□ -1.98
HCFC2Q9Y5Z7 MIR338-201ENST00000636369 67 ntBASIC2.68□□□□□ -1.98
HCFC2Q9Y5Z7 RNU6-1298P-201ENST00000362456 101 ntBASIC2.67□□□□□ -1.98
HCFC2Q9Y5Z7 Y_RNA.43-201ENST00000362670 111 ntBASIC2.67□□□□□ -1.98
HCFC2Q9Y5Z7 Y_RNA.99-201ENST00000363138 105 ntBASIC2.67□□□□□ -1.98
HCFC2Q9Y5Z7 RNU6-743P-201ENST00000364151 106 ntBASIC2.67□□□□□ -1.98
HCFC2Q9Y5Z7 SNORD116-21-201ENST00000384507 92 ntBASIC2.67□□□□□ -1.98
HCFC2Q9Y5Z7 MIR515-2-201ENST00000384883 83 ntBASIC2.67□□□□□ -1.98
HCFC2Q9Y5Z7 MIR515-1-201ENST00000384884 83 ntBASIC2.67□□□□□ -1.98
HCFC2Q9Y5Z7 MIR548A3-201ENST00000385297 97 ntBASIC2.67□□□□□ -1.98
HCFC2Q9Y5Z7 RN7SKP223-201ENST00000410582 62 ntBASIC2.67□□□□□ -1.98
HCFC2Q9Y5Z7 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.67□□□□□ -1.98
HCFC2Q9Y5Z7 SNRPGP10-201ENST00000432323 225 ntBASIC2.67□□□□□ -1.98
HCFC2Q9Y5Z7 AC244505.4-201ENST00000434905 287 ntBASIC2.67□□□□□ -1.98
HCFC2Q9Y5Z7 SSXP5-201ENST00000443473 287 ntBASIC2.67□□□□□ -1.98
HCFC2Q9Y5Z7 Y_RNA.651-201ENST00000459380 103 ntBASIC2.67□□□□□ -1.98
HCFC2Q9Y5Z7 MIR4679-2-201ENST00000578358 77 ntBASIC2.67□□□□□ -1.98
HCFC2Q9Y5Z7 AL022345.2-201ENST00000606307 135 ntBASIC2.67□□□□□ -1.98
HCFC2Q9Y5Z7 MIR6079-201ENST00000635807 62 ntBASIC2.67□□□□□ -1.98
HCFC2Q9Y5Z7 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC2.67□□□□□ -1.98
HCFC2Q9Y5Z7 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.67□□□□□ -1.98
HCFC2Q9Y5Z7 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
HCFC2Q9Y5Z7 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
HCFC2Q9Y5Z7 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
HCFC2Q9Y5Z7 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.66□□□□□ -1.98
HCFC2Q9Y5Z7 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC2.66□□□□□ -1.98
HCFC2Q9Y5Z7 Y_RNA.309-201ENST00000365046 111 ntBASIC2.66□□□□□ -1.98
HCFC2Q9Y5Z7 SNORA26.7-201ENST00000391288 122 ntBASIC2.66□□□□□ -1.98
HCFC2Q9Y5Z7 RNU6-1186P-201ENST00000410429 97 ntBASIC2.66□□□□□ -1.98
HCFC2Q9Y5Z7 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.66□□□□□ -1.98
HCFC2Q9Y5Z7 AL021397.1-201ENST00000451806 248 ntBASIC2.66□□□□□ -1.98
HCFC2Q9Y5Z7 RNU7-94P-201ENST00000459576 63 ntBASIC2.66□□□□□ -1.98
HCFC2Q9Y5Z7 AC018868.1-201ENST00000491307 315 ntBASIC2.66□□□□□ -1.98
HCFC2Q9Y5Z7 RNA5SP458-201ENST00000516188 119 ntBASIC2.66□□□□□ -1.98
HCFC2Q9Y5Z7 Y_RNA.714-201ENST00000517065 90 ntBASIC2.66□□□□□ -1.98
HCFC2Q9Y5Z7 AC024995.1-201ENST00000523014 93 ntBASIC2.66□□□□□ -1.98
HCFC2Q9Y5Z7 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.66□□□□□ -1.98
HCFC2Q9Y5Z7 AL355297.2-201ENST00000604792 129 ntBASIC2.66□□□□□ -1.98
HCFC2Q9Y5Z7 UGP2-230ENST00000626380 276 ntTSL 5 BASIC2.66□□□□□ -1.98
HCFC2Q9Y5Z7 U6.108-201ENST00000637764 58 ntBASIC2.66□□□□□ -1.98
HCFC2Q9Y5Z7 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC2.65□□□□□ -1.98
HCFC2Q9Y5Z7 ZNF271P-202ENST00000465539 1970 ntBASIC2.65□□□□□ -1.98
HCFC2Q9Y5Z7 AC008264.2-201ENST00000610193 3731 ntBASIC2.65□□□□□ -1.98
HCFC2Q9Y5Z7 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.65□□□□□ -1.98
HCFC2Q9Y5Z7 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.65□□□□□ -1.99
HCFC2Q9Y5Z7 RNU6-1164P-201ENST00000364428 107 ntBASIC2.65□□□□□ -1.99
HCFC2Q9Y5Z7 U8.9-201ENST00000365667 134 ntBASIC2.65□□□□□ -1.99
HCFC2Q9Y5Z7 RNU6-880P-201ENST00000384526 107 ntBASIC2.65□□□□□ -1.99
HCFC2Q9Y5Z7 RN7SKP123-201ENST00000410732 291 ntBASIC2.65□□□□□ -1.99
HCFC2Q9Y5Z7 RNU6-781P-201ENST00000516377 101 ntBASIC2.65□□□□□ -1.99
HCFC2Q9Y5Z7 AC025166.1-201ENST00000612411 163 ntBASIC2.65□□□□□ -1.99
HCFC2Q9Y5Z7 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.65□□□□□ -1.99
HCFC2Q9Y5Z7 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
HCFC2Q9Y5Z7 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC2.65□□□□□ -1.99
HCFC2Q9Y5Z7 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.65□□□□□ -1.99
HCFC2Q9Y5Z7 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC2.65□□□□□ -1.99
HCFC2Q9Y5Z7 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
HCFC2Q9Y5Z7 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.64□□□□□ -1.99
HCFC2Q9Y5Z7 RNU6-147P-201ENST00000383983 107 ntBASIC2.64□□□□□ -1.99
HCFC2Q9Y5Z7 SNORA1-201ENST00000384107 130 ntBASIC2.64□□□□□ -1.99
HCFC2Q9Y5Z7 SNORD61-201ENST00000384252 73 ntBASIC2.64□□□□□ -1.99
HCFC2Q9Y5Z7 MIR181B1-201ENST00000385240 110 ntBASIC2.64□□□□□ -1.99
HCFC2Q9Y5Z7 AL359511.1-201ENST00000402970 211 ntBASIC2.64□□□□□ -1.99
HCFC2Q9Y5Z7 RNU6ATAC40P-201ENST00000408580 137 ntBASIC2.64□□□□□ -1.99
HCFC2Q9Y5Z7 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.64□□□□□ -1.99
HCFC2Q9Y5Z7 FTH1P12-201ENST00000432137 551 ntBASIC2.64□□□□□ -1.99
HCFC2Q9Y5Z7 AC234781.5-201ENST00000508429 271 ntBASIC2.64□□□□□ -1.99
HCFC2Q9Y5Z7 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.64□□□□□ -1.99
HCFC2Q9Y5Z7 RNU1-142P-201ENST00000516682 145 ntBASIC2.64□□□□□ -1.99
HCFC2Q9Y5Z7 RNU6-667P-201ENST00000517186 102 ntBASIC2.64□□□□□ -1.99
HCFC2Q9Y5Z7 AC007536.1-201ENST00000533382 349 ntBASIC2.64□□□□□ -1.99
HCFC2Q9Y5Z7 MIR3129-201ENST00000581095 76 ntBASIC2.64□□□□□ -1.99
HCFC2Q9Y5Z7 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
HCFC2Q9Y5Z7 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.64□□□□□ -1.99
HCFC2Q9Y5Z7 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.64□□□□□ -1.99
HCFC2Q9Y5Z7 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.63□□□□□ -1.99
HCFC2Q9Y5Z7 MIR764-201ENST00000390811 85 ntBASIC2.63□□□□□ -1.99
HCFC2Q9Y5Z7 RNU6-220P-201ENST00000390919 107 ntBASIC2.63□□□□□ -1.99
HCFC2Q9Y5Z7 AL117342.1-201ENST00000404861 406 ntBASIC2.63□□□□□ -1.99
HCFC2Q9Y5Z7 Y_RNA.621-201ENST00000411065 96 ntBASIC2.63□□□□□ -1.99
HCFC2Q9Y5Z7 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.63□□□□□ -1.99
HCFC2Q9Y5Z7 AL356320.1-201ENST00000429616 163 ntBASIC2.63□□□□□ -1.99
HCFC2Q9Y5Z7 Z96811.1-201ENST00000445880 108 ntBASIC2.63□□□□□ -1.99
HCFC2Q9Y5Z7 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC2.63□□□□□ -1.99
HCFC2Q9Y5Z7 AP002004.2-201ENST00000531656 154 ntBASIC2.63□□□□□ -1.99
HCFC2Q9Y5Z7 AL121890.5-201ENST00000620848 304 ntBASIC2.63□□□□□ -1.99
HCFC2Q9Y5Z7 MTND5P32-201ENST00000560711 1802 ntBASIC2.63□□□□□ -1.99
HCFC2Q9Y5Z7 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
HCFC2Q9Y5Z7 AL391516.1-201ENST00000554380 2449 ntBASIC2.62□□□□□ -1.99
HCFC2Q9Y5Z7 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 325.8 ms