Protein–RNA interactions for Protein: Q9Y5I0

PCDHA13, Protocadherin alpha-13, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13Q9Y5I0 RNU6-453P-201ENST00000516819 85 ntBASIC2.18□□□□□ -2.06
PCDHA13Q9Y5I0 Y_RNA.714-201ENST00000517065 90 ntBASIC2.18□□□□□ -2.06
PCDHA13Q9Y5I0 MIR3935-201ENST00000583472 104 ntBASIC2.18□□□□□ -2.06
PCDHA13Q9Y5I0 MIR4762-201ENST00000585261 75 ntBASIC2.18□□□□□ -2.06
PCDHA13Q9Y5I0 SNORA28-201ENST00000606769 126 ntBASIC2.18□□□□□ -2.06
PCDHA13Q9Y5I0 MIR6895-201ENST00000613497 78 ntBASIC2.18□□□□□ -2.06
PCDHA13Q9Y5I0 JPX_2.1-201ENST00000614161 69 ntBASIC2.18□□□□□ -2.06
PCDHA13Q9Y5I0 MIR203B-201ENST00000636080 86 ntBASIC2.18□□□□□ -2.06
PCDHA13Q9Y5I0 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.17□□□□□ -2.06
PCDHA13Q9Y5I0 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
PCDHA13Q9Y5I0 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.17□□□□□ -2.06
PCDHA13Q9Y5I0 U8.2-201ENST00000363156 134 ntBASIC2.17□□□□□ -2.06
PCDHA13Q9Y5I0 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
PCDHA13Q9Y5I0 AL606845.1-201ENST00000404881 255 ntBASIC2.17□□□□□ -2.06
PCDHA13Q9Y5I0 RNU4-53P-201ENST00000410828 140 ntBASIC2.17□□□□□ -2.06
PCDHA13Q9Y5I0 AL158823.1-201ENST00000418441 478 ntBASIC2.17□□□□□ -2.06
PCDHA13Q9Y5I0 Y_RNA.797-201ENST00000515977 94 ntBASIC2.17□□□□□ -2.06
PCDHA13Q9Y5I0 Y_RNA.662-201ENST00000516028 97 ntBASIC2.17□□□□□ -2.06
PCDHA13Q9Y5I0 RNU6-1219P-201ENST00000516143 112 ntBASIC2.17□□□□□ -2.06
PCDHA13Q9Y5I0 SNORA31.10-201ENST00000516482 106 ntBASIC2.17□□□□□ -2.06
PCDHA13Q9Y5I0 IGKV3-31-201ENST00000523109 329 ntBASIC2.17□□□□□ -2.06
PCDHA13Q9Y5I0 AC104984.5-201ENST00000586878 94 ntBASIC2.17□□□□□ -2.06
PCDHA13Q9Y5I0 AC087685.1-201ENST00000587507 141 ntBASIC2.17□□□□□ -2.06
PCDHA13Q9Y5I0 AC108706.1-201ENST00000611053 297 ntBASIC2.17□□□□□ -2.06
PCDHA13Q9Y5I0 AL591926.4-201ENST00000616895 298 ntBASIC2.17□□□□□ -2.06
PCDHA13Q9Y5I0 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
PCDHA13Q9Y5I0 Y_RNA.23-201ENST00000362496 106 ntBASIC2.16□□□□□ -2.06
PCDHA13Q9Y5I0 Y_RNA.182-201ENST00000363880 111 ntBASIC2.16□□□□□ -2.06
PCDHA13Q9Y5I0 RNU6-275P-201ENST00000364910 107 ntBASIC2.16□□□□□ -2.06
PCDHA13Q9Y5I0 RNU4-52P-201ENST00000384209 138 ntBASIC2.16□□□□□ -2.06
PCDHA13Q9Y5I0 MT-TT-201ENST00000387460 66 ntBASIC2.16□□□□□ -2.06
PCDHA13Q9Y5I0 PCNPP3-201ENST00000393579 471 ntBASIC2.16□□□□□ -2.06
PCDHA13Q9Y5I0 RNU2-7P-201ENST00000410794 178 ntBASIC2.16□□□□□ -2.06
PCDHA13Q9Y5I0 RN7SKP192-201ENST00000411291 327 ntBASIC2.16□□□□□ -2.06
PCDHA13Q9Y5I0 FTH1P12-201ENST00000432137 551 ntBASIC2.16□□□□□ -2.06
PCDHA13Q9Y5I0 SNRPGP10-201ENST00000432323 225 ntBASIC2.16□□□□□ -2.06
PCDHA13Q9Y5I0 AC245047.8-201ENST00000456455 284 ntBASIC2.16□□□□□ -2.06
PCDHA13Q9Y5I0 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.16□□□□□ -2.06
PCDHA13Q9Y5I0 uc_338.4-201ENST00000616635 176 ntBASIC2.16□□□□□ -2.06
PCDHA13Q9Y5I0 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.16□□□□□ -2.06
PCDHA13Q9Y5I0 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
PCDHA13Q9Y5I0 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.16□□□□□ -2.06
PCDHA13Q9Y5I0 ZNF702P-202ENST00000434269 1966 ntBASIC2.16□□□□□ -2.06
PCDHA13Q9Y5I0 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.06
PCDHA13Q9Y5I0 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC2.15□□□□□ -2.06
PCDHA13Q9Y5I0 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.07
PCDHA13Q9Y5I0 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.15□□□□□ -2.07
PCDHA13Q9Y5I0 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
PCDHA13Q9Y5I0 U8.5-201ENST00000364528 136 ntBASIC2.15□□□□□ -2.07
PCDHA13Q9Y5I0 Y_RNA.265-201ENST00000364677 108 ntBASIC2.15□□□□□ -2.07
PCDHA13Q9Y5I0 Y_RNA.412-201ENST00000384001 104 ntBASIC2.15□□□□□ -2.07
PCDHA13Q9Y5I0 RNU6-209P-201ENST00000384118 107 ntBASIC2.15□□□□□ -2.07
PCDHA13Q9Y5I0 MIR522-201ENST00000385071 87 ntBASIC2.15□□□□□ -2.07
PCDHA13Q9Y5I0 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC2.15□□□□□ -2.07
PCDHA13Q9Y5I0 RPL23AP63-201ENST00000498752 471 ntBASIC2.15□□□□□ -2.07
PCDHA13Q9Y5I0 RNA5SP364-201ENST00000516938 78 ntBASIC2.15□□□□□ -2.07
PCDHA13Q9Y5I0 RNA5SP437-201ENST00000517249 129 ntBASIC2.15□□□□□ -2.07
PCDHA13Q9Y5I0 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC2.15□□□□□ -2.07
PCDHA13Q9Y5I0 MIR5089-201ENST00000580047 84 ntBASIC2.15□□□□□ -2.07
PCDHA13Q9Y5I0 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC2.15□□□□□ -2.07
PCDHA13Q9Y5I0 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.15□□□□□ -2.07
PCDHA13Q9Y5I0 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
PCDHA13Q9Y5I0 MIR126-201ENST00000362291 85 ntBASIC2.14□□□□□ -2.07
PCDHA13Q9Y5I0 Y_RNA.150-201ENST00000363562 102 ntBASIC2.14□□□□□ -2.07
PCDHA13Q9Y5I0 Y_RNA.242-201ENST00000364473 110 ntBASIC2.14□□□□□ -2.07
PCDHA13Q9Y5I0 SNORA16B-201ENST00000364674 135 ntBASIC2.14□□□□□ -2.07
PCDHA13Q9Y5I0 Y_RNA.441-201ENST00000384123 112 ntBASIC2.14□□□□□ -2.07
PCDHA13Q9Y5I0 RNU6-360P-201ENST00000390944 104 ntBASIC2.14□□□□□ -2.07
PCDHA13Q9Y5I0 Y_RNA.587-201ENST00000391210 103 ntBASIC2.14□□□□□ -2.07
PCDHA13Q9Y5I0 AL023284.1-201ENST00000403956 276 ntBASIC2.14□□□□□ -2.07
PCDHA13Q9Y5I0 SUMO2P12-201ENST00000405924 140 ntBASIC2.14□□□□□ -2.07
PCDHA13Q9Y5I0 MIR1261-201ENST00000408659 82 ntBASIC2.14□□□□□ -2.07
PCDHA13Q9Y5I0 RNA5SP425-201ENST00000410336 112 ntBASIC2.14□□□□□ -2.07
PCDHA13Q9Y5I0 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC2.14□□□□□ -2.07
PCDHA13Q9Y5I0 OR9P1P-201ENST00000496431 281 ntBASIC2.14□□□□□ -2.07
PCDHA13Q9Y5I0 AC005840.1-201ENST00000498412 377 ntBASIC2.14□□□□□ -2.07
PCDHA13Q9Y5I0 RNU6-126P-201ENST00000516685 103 ntBASIC2.14□□□□□ -2.07
PCDHA13Q9Y5I0 AC109810.1-201ENST00000534066 224 ntBASIC2.14□□□□□ -2.07
PCDHA13Q9Y5I0 AC121758.2-201ENST00000553271 193 ntBASIC2.14□□□□□ -2.07
PCDHA13Q9Y5I0 MIR5694-201ENST00000581190 76 ntBASIC2.14□□□□□ -2.07
PCDHA13Q9Y5I0 Y_RNA.783-201ENST00000613546 102 ntBASIC2.14□□□□□ -2.07
PCDHA13Q9Y5I0 PLD1-217ENST00000627725 174 ntTSL 5 BASIC2.14□□□□□ -2.07
PCDHA13Q9Y5I0 ZNF658B-202ENST00000615961 3375 ntBASIC2.14□□□□□ -2.07
PCDHA13Q9Y5I0 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
PCDHA13Q9Y5I0 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
PCDHA13Q9Y5I0 RNU6-1138P-201ENST00000365359 106 ntBASIC2.13□□□□□ -2.07
PCDHA13Q9Y5I0 RNU6-728P-201ENST00000365375 104 ntBASIC2.13□□□□□ -2.07
PCDHA13Q9Y5I0 Y_RNA.464-201ENST00000384282 110 ntBASIC2.13□□□□□ -2.07
PCDHA13Q9Y5I0 AL034345.1-201ENST00000407768 123 ntBASIC2.13□□□□□ -2.07
PCDHA13Q9Y5I0 RNU4-43P-201ENST00000410628 137 ntBASIC2.13□□□□□ -2.07
PCDHA13Q9Y5I0 RPL30P13-201ENST00000418873 348 ntBASIC2.13□□□□□ -2.07
PCDHA13Q9Y5I0 HMGN2P38-201ENST00000423806 265 ntBASIC2.13□□□□□ -2.07
PCDHA13Q9Y5I0 AL356320.1-201ENST00000429616 163 ntBASIC2.13□□□□□ -2.07
PCDHA13Q9Y5I0 NDUFA4P2-201ENST00000489989 244 ntBASIC2.13□□□□□ -2.07
PCDHA13Q9Y5I0 SNORD77.4-201ENST00000516158 81 ntBASIC2.13□□□□□ -2.07
PCDHA13Q9Y5I0 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2.13□□□□□ -2.07
PCDHA13Q9Y5I0 AL049861.1-201ENST00000603130 150 ntBASIC2.13□□□□□ -2.07
PCDHA13Q9Y5I0 MIR6715A-201ENST00000615929 79 ntBASIC2.13□□□□□ -2.07
PCDHA13Q9Y5I0 SNORA4.2-201ENST00000365313 147 ntBASIC2.12□□□□□ -2.07
PCDHA13Q9Y5I0 RNU6-1031P-201ENST00000384773 107 ntBASIC2.12□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 145.4 ms