Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 MTATP6P14-201ENST00000455189 673 ntBASIC-1.62□□□□□ -2.67
AP4S1Q9Y587 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC-1.62□□□□□ -2.67
AP4S1Q9Y587 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC-1.62□□□□□ -2.67
AP4S1Q9Y587 RNU6-784P-201ENST00000384330 106 ntBASIC-1.63□□□□□ -2.67
AP4S1Q9Y587 SNORD73A-201ENST00000386062 65 ntBASIC-1.63□□□□□ -2.67
AP4S1Q9Y587 U8.15-201ENST00000390947 134 ntBASIC-1.63□□□□□ -2.67
AP4S1Q9Y587 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC-1.63□□□□□ -2.67
AP4S1Q9Y587 AL590002.1-201ENST00000406554 418 ntBASIC-1.63□□□□□ -2.67
AP4S1Q9Y587 MTATP6P18-201ENST00000417994 673 ntBASIC-1.63□□□□□ -2.67
AP4S1Q9Y587 AC137499.1-201ENST00000427602 88 ntBASIC-1.63□□□□□ -2.67
AP4S1Q9Y587 RNU6-1007P-201ENST00000516586 107 ntBASIC-1.63□□□□□ -2.67
AP4S1Q9Y587 RNU6-1332P-201ENST00000516666 104 ntBASIC-1.63□□□□□ -2.67
AP4S1Q9Y587 RNU6-85P-201ENST00000605989 107 ntBASIC-1.63□□□□□ -2.67
AP4S1Q9Y587 RNU5B-4P-201ENST00000363508 111 ntBASIC-1.64□□□□□ -2.67
AP4S1Q9Y587 Y_RNA.494-201ENST00000384432 111 ntBASIC-1.64□□□□□ -2.67
AP4S1Q9Y587 RNU6-900P-201ENST00000384498 102 ntBASIC-1.64□□□□□ -2.67
AP4S1Q9Y587 SNORD64-201ENST00000386683 67 ntBASIC-1.64□□□□□ -2.67
AP4S1Q9Y587 RNU7-104P-201ENST00000459398 79 ntBASIC-1.64□□□□□ -2.67
AP4S1Q9Y587 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC-1.64□□□□□ -2.67
AP4S1Q9Y587 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC-1.64□□□□□ -2.67
AP4S1Q9Y587 AL391834.2-201ENST00000609982 546 ntBASIC-1.64□□□□□ -2.67
AP4S1Q9Y587 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC-1.64□□□□□ -2.67
AP4S1Q9Y587 AL158209.2-201ENST00000619266 216 ntBASIC-1.64□□□□□ -2.67
AP4S1Q9Y587 RNU6-268P-201ENST00000364174 107 ntBASIC-1.65□□□□□ -2.67
AP4S1Q9Y587 Y_RNA.294-201ENST00000364916 102 ntBASIC-1.65□□□□□ -2.67
AP4S1Q9Y587 RNU6-431P-201ENST00000383874 107 ntBASIC-1.65□□□□□ -2.67
AP4S1Q9Y587 RNU6-1157P-201ENST00000384456 106 ntBASIC-1.65□□□□□ -2.67
AP4S1Q9Y587 RNU6-393P-201ENST00000384475 107 ntBASIC-1.65□□□□□ -2.67
AP4S1Q9Y587 SNORA72.6-201ENST00000384520 129 ntBASIC-1.65□□□□□ -2.67
AP4S1Q9Y587 Y_RNA.517-201ENST00000384551 106 ntBASIC-1.65□□□□□ -2.67
AP4S1Q9Y587 RNA5SP261-201ENST00000410536 106 ntBASIC-1.65□□□□□ -2.67
AP4S1Q9Y587 RNU6-437P-201ENST00000459408 95 ntBASIC-1.65□□□□□ -2.67
AP4S1Q9Y587 Y_RNA.637-201ENST00000459424 114 ntBASIC-1.65□□□□□ -2.67
AP4S1Q9Y587 MTCO2P29-201ENST00000465212 189 ntBASIC-1.65□□□□□ -2.67
AP4S1Q9Y587 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC-1.65□□□□□ -2.67
AP4S1Q9Y587 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC-1.65□□□□□ -2.67
AP4S1Q9Y587 MTND1P24-201ENST00000552175 861 ntBASIC-1.65□□□□□ -2.67
AP4S1Q9Y587 MIR4306-201ENST00000583390 91 ntBASIC-1.65□□□□□ -2.67
AP4S1Q9Y587 RNU6-1287P-201ENST00000362914 107 ntBASIC-1.66□□□□□ -2.68
AP4S1Q9Y587 Y_RNA.465-201ENST00000384293 102 ntBASIC-1.66□□□□□ -2.68
AP4S1Q9Y587 RNU6-1060P-201ENST00000384664 107 ntBASIC-1.66□□□□□ -2.68
AP4S1Q9Y587 MIR518B-201ENST00000385127 83 ntBASIC-1.66□□□□□ -2.68
AP4S1Q9Y587 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC-1.66□□□□□ -2.68
AP4S1Q9Y587 Y_RNA.578-201ENST00000390903 88 ntBASIC-1.66□□□□□ -2.68
AP4S1Q9Y587 RNU6ATAC42P-201ENST00000408637 95 ntBASIC-1.66□□□□□ -2.68
AP4S1Q9Y587 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC-1.66□□□□□ -2.68
AP4S1Q9Y587 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC-1.66□□□□□ -2.68
AP4S1Q9Y587 SNORD22.1-201ENST00000516331 125 ntBASIC-1.66□□□□□ -2.68
AP4S1Q9Y587 OSBPL9P5-201ENST00000542581 171 ntBASIC-1.66□□□□□ -2.68
AP4S1Q9Y587 MIR3684-201ENST00000579779 74 ntBASIC-1.66□□□□□ -2.68
AP4S1Q9Y587 AL356055.1-201ENST00000602528 446 ntBASIC-1.66□□□□□ -2.68
AP4S1Q9Y587 AL360085.1-201ENST00000604713 532 ntBASIC-1.66□□□□□ -2.68
AP4S1Q9Y587 AC087588.2-201ENST00000617667 426 ntBASIC-1.66□□□□□ -2.68
AP4S1Q9Y587 Y_RNA.12-201ENST00000362393 112 ntBASIC-1.67□□□□□ -2.68
AP4S1Q9Y587 MIR539-201ENST00000365690 78 ntBASIC-1.67□□□□□ -2.68
AP4S1Q9Y587 RNU6-10P-201ENST00000384036 107 ntBASIC-1.67□□□□□ -2.68
AP4S1Q9Y587 MIR181B2-201ENST00000385004 89 ntBASIC-1.67□□□□□ -2.68
AP4S1Q9Y587 SNORD70.1-201ENST00000391007 85 ntBASIC-1.67□□□□□ -2.68
AP4S1Q9Y587 MTND2P9-201ENST00000422293 931 ntBASIC-1.67□□□□□ -2.68
AP4S1Q9Y587 USP9YP12-201ENST00000450481 570 ntBASIC-1.67□□□□□ -2.68
AP4S1Q9Y587 AC022137.1-201ENST00000483735 151 ntBASIC-1.67□□□□□ -2.68
AP4S1Q9Y587 RNU6-1220P-201ENST00000517126 108 ntBASIC-1.67□□□□□ -2.68
AP4S1Q9Y587 AC006386.1-201ENST00000619436 415 ntBASIC-1.67□□□□□ -2.68
AP4S1Q9Y587 U6.115-201ENST00000636045 103 ntBASIC-1.67□□□□□ -2.68
AP4S1Q9Y587 AC099654.12-201ENST00000639868 649 ntBASIC-1.67□□□□□ -2.68
AP4S1Q9Y587 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC-1.68□□□□□ -2.68
AP4S1Q9Y587 RNY4P3-201ENST00000365254 95 ntBASIC-1.68□□□□□ -2.68
AP4S1Q9Y587 Y_RNA.433-201ENST00000384089 102 ntBASIC-1.68□□□□□ -2.68
AP4S1Q9Y587 RNU6-434P-201ENST00000384376 107 ntBASIC-1.68□□□□□ -2.68
AP4S1Q9Y587 USP9YP21-201ENST00000420603 432 ntBASIC-1.68□□□□□ -2.68
AP4S1Q9Y587 USP9YP30-201ENST00000430729 455 ntBASIC-1.68□□□□□ -2.68
AP4S1Q9Y587 AC119618.1-201ENST00000434191 222 ntBASIC-1.68□□□□□ -2.68
AP4S1Q9Y587 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC-1.68□□□□□ -2.68
AP4S1Q9Y587 BIRC6-AS1-201ENST00000455572 697 ntTSL 3 BASIC-1.68□□□□□ -2.68
AP4S1Q9Y587 RNU7-67P-201ENST00000459003 62 ntBASIC-1.68□□□□□ -2.68
AP4S1Q9Y587 RNA5SP33-201ENST00000516687 98 ntBASIC-1.68□□□□□ -2.68
AP4S1Q9Y587 SNORA25.16-201ENST00000516741 121 ntBASIC-1.68□□□□□ -2.68
AP4S1Q9Y587 RNU6-958P-201ENST00000516995 106 ntBASIC-1.68□□□□□ -2.68
AP4S1Q9Y587 UBL5P4-201ENST00000562584 236 ntBASIC-1.68□□□□□ -2.68
AP4S1Q9Y587 AC008507.2-201ENST00000588402 1176 ntBASIC-1.68□□□□□ -2.68
AP4S1Q9Y587 AC005828.6-201ENST00000606610 232 ntBASIC-1.68□□□□□ -2.68
AP4S1Q9Y587 Y_RNA.38-201ENST00000362617 102 ntBASIC-1.69□□□□□ -2.68
AP4S1Q9Y587 RNA5SP403-201ENST00000363598 108 ntBASIC-1.69□□□□□ -2.68
AP4S1Q9Y587 Y_RNA.179-201ENST00000363844 90 ntBASIC-1.69□□□□□ -2.68
AP4S1Q9Y587 RNY3P5-201ENST00000384127 102 ntBASIC-1.69□□□□□ -2.68
AP4S1Q9Y587 MIR153-2-201ENST00000385225 87 ntBASIC-1.69□□□□□ -2.68
AP4S1Q9Y587 MIRLET7F2-201ENST00000385277 83 ntBASIC-1.69□□□□□ -2.68
AP4S1Q9Y587 RNA5SP475-201ENST00000410568 110 ntBASIC-1.69□□□□□ -2.68
AP4S1Q9Y587 RPL39P25-201ENST00000449384 154 ntBASIC-1.69□□□□□ -2.68
AP4S1Q9Y587 NDUFAF4P4-201ENST00000454883 502 ntBASIC-1.69□□□□□ -2.68
AP4S1Q9Y587 U8.21-201ENST00000459536 136 ntBASIC-1.69□□□□□ -2.68
AP4S1Q9Y587 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC-1.69□□□□□ -2.68
AP4S1Q9Y587 RNU6-1028P-201ENST00000517164 93 ntBASIC-1.69□□□□□ -2.68
AP4S1Q9Y587 MTATP6P15-201ENST00000527233 835 ntBASIC-1.69□□□□□ -2.68
AP4S1Q9Y587 MTCO3P23-201ENST00000561363 289 ntBASIC-1.69□□□□□ -2.68
AP4S1Q9Y587 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC-1.69□□□□□ -2.68
AP4S1Q9Y587 MIR4473-201ENST00000583731 91 ntBASIC-1.69□□□□□ -2.68
AP4S1Q9Y587 AC011373.1-201ENST00000607270 237 ntBASIC-1.69□□□□□ -2.68
AP4S1Q9Y587 TUSC7.1-201ENST00000610969 165 ntBASIC-1.69□□□□□ -2.68
AP4S1Q9Y587 AC072046.2-201ENST00000618366 268 ntBASIC-1.69□□□□□ -2.68
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms