Protein–RNA interactions for Protein: Q9Y2K6

USP20, Ubiquitin carboxyl-terminal hydrolase 20, humanhuman

Predictions only

Length 914 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP20Q9Y2K6 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC3.17□□□□□ -1.9
USP20Q9Y2K6 RNU6-461P-201ENST00000364195 107 ntBASIC3.17□□□□□ -1.9
USP20Q9Y2K6 Y_RNA.336-201ENST00000365307 109 ntBASIC3.17□□□□□ -1.9
USP20Q9Y2K6 SNORA8-201ENST00000384574 139 ntBASIC3.17□□□□□ -1.9
USP20Q9Y2K6 SNRPGP14-201ENST00000435400 219 ntBASIC3.17□□□□□ -1.9
USP20Q9Y2K6 AC107083.1-201ENST00000439643 279 ntBASIC3.17□□□□□ -1.9
USP20Q9Y2K6 AP004217.1-201ENST00000480579 346 ntBASIC3.17□□□□□ -1.9
USP20Q9Y2K6 AC004486.1-201ENST00000546846 233 ntBASIC3.17□□□□□ -1.9
USP20Q9Y2K6 CTSLP2-204ENST00000629029 392 ntBASIC3.17□□□□□ -1.9
USP20Q9Y2K6 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
USP20Q9Y2K6 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
USP20Q9Y2K6 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
USP20Q9Y2K6 Y_RNA.198-201ENST00000364013 98 ntBASIC3.16□□□□□ -1.9
USP20Q9Y2K6 Y_RNA.369-201ENST00000365568 117 ntBASIC3.16□□□□□ -1.9
USP20Q9Y2K6 RNU6-851P-201ENST00000384565 107 ntBASIC3.16□□□□□ -1.9
USP20Q9Y2K6 MIR548O-201ENST00000408583 114 ntBASIC3.16□□□□□ -1.9
USP20Q9Y2K6 RPL23AP94-201ENST00000512518 302 ntBASIC3.16□□□□□ -1.9
USP20Q9Y2K6 AC091826.1-201ENST00000514065 313 ntBASIC3.16□□□□□ -1.9
USP20Q9Y2K6 RNU6-94P-201ENST00000607728 107 ntBASIC3.16□□□□□ -1.9
USP20Q9Y2K6 uc_338.28-201ENST00000612082 187 ntBASIC3.16□□□□□ -1.9
USP20Q9Y2K6 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC3.16□□□□□ -1.9
USP20Q9Y2K6 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
USP20Q9Y2K6 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.16□□□□□ -1.9
USP20Q9Y2K6 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
USP20Q9Y2K6 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.9
USP20Q9Y2K6 ZNF720P1-201ENST00000562403 1939 ntBASIC3.15□□□□□ -1.9
USP20Q9Y2K6 SNORD14E-201ENST00000364009 85 ntBASIC3.15□□□□□ -1.91
USP20Q9Y2K6 Y_RNA.366-201ENST00000365540 102 ntBASIC3.15□□□□□ -1.91
USP20Q9Y2K6 RNU6-1189P-201ENST00000383958 107 ntBASIC3.15□□□□□ -1.91
USP20Q9Y2K6 SNORD12C-201ENST00000386307 89 ntBASIC3.15□□□□□ -1.91
USP20Q9Y2K6 MIR802-201ENST00000390235 94 ntBASIC3.15□□□□□ -1.91
USP20Q9Y2K6 RNA5SP482-201ENST00000391269 118 ntBASIC3.15□□□□□ -1.91
USP20Q9Y2K6 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC3.15□□□□□ -1.91
USP20Q9Y2K6 AL163195.1-201ENST00000496941 348 ntBASIC3.15□□□□□ -1.91
USP20Q9Y2K6 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC3.15□□□□□ -1.91
USP20Q9Y2K6 AC107016.2-201ENST00000547968 190 ntBASIC3.15□□□□□ -1.91
USP20Q9Y2K6 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC3.15□□□□□ -1.91
USP20Q9Y2K6 AC106754.2-201ENST00000623006 233 ntBASIC3.15□□□□□ -1.91
USP20Q9Y2K6 MIR376A2-201ENST00000636782 80 ntBASIC3.15□□□□□ -1.91
USP20Q9Y2K6 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC3.14□□□□□ -1.91
USP20Q9Y2K6 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
USP20Q9Y2K6 RNU6-766P-201ENST00000362478 107 ntBASIC3.14□□□□□ -1.91
USP20Q9Y2K6 SNORD115-28-201ENST00000363931 81 ntBASIC3.14□□□□□ -1.91
USP20Q9Y2K6 snoU2-30.1-201ENST00000365012 70 ntBASIC3.14□□□□□ -1.91
USP20Q9Y2K6 AC009238.1-201ENST00000442165 424 ntBASIC3.14□□□□□ -1.91
USP20Q9Y2K6 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC3.14□□□□□ -1.91
USP20Q9Y2K6 AC009237.6-201ENST00000446969 424 ntBASIC3.14□□□□□ -1.91
USP20Q9Y2K6 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC3.14□□□□□ -1.91
USP20Q9Y2K6 SNORA31.26-201ENST00000517250 137 ntBASIC3.14□□□□□ -1.91
USP20Q9Y2K6 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
USP20Q9Y2K6 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
USP20Q9Y2K6 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
USP20Q9Y2K6 MIR450A1-201ENST00000362262 91 ntBASIC3.13□□□□□ -1.91
USP20Q9Y2K6 Y_RNA.49-201ENST00000362714 112 ntBASIC3.13□□□□□ -1.91
USP20Q9Y2K6 SNORA33-201ENST00000363664 130 ntBASIC3.13□□□□□ -1.91
USP20Q9Y2K6 RNY4P6-201ENST00000363667 96 ntBASIC3.13□□□□□ -1.91
USP20Q9Y2K6 RNU1-112P-201ENST00000364401 164 ntBASIC3.13□□□□□ -1.91
USP20Q9Y2K6 SNORA9.2-201ENST00000365361 133 ntBASIC3.13□□□□□ -1.91
USP20Q9Y2K6 RNU6-1072P-201ENST00000384703 107 ntBASIC3.13□□□□□ -1.91
USP20Q9Y2K6 RNU6-443P-201ENST00000384780 107 ntBASIC3.13□□□□□ -1.91
USP20Q9Y2K6 RNU6-554P-201ENST00000410466 106 ntBASIC3.13□□□□□ -1.91
USP20Q9Y2K6 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC3.13□□□□□ -1.91
USP20Q9Y2K6 AC108938.1-201ENST00000451204 136 ntBASIC3.13□□□□□ -1.91
USP20Q9Y2K6 RN7SL297P-201ENST00000483161 293 ntBASIC3.13□□□□□ -1.91
USP20Q9Y2K6 Y_RNA.677-201ENST00000516401 85 ntBASIC3.13□□□□□ -1.91
USP20Q9Y2K6 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC3.13□□□□□ -1.91
USP20Q9Y2K6 GTF3AP2-201ENST00000557014 266 ntBASIC3.13□□□□□ -1.91
USP20Q9Y2K6 MIR7106-201ENST00000612419 65 ntBASIC3.13□□□□□ -1.91
USP20Q9Y2K6 AC009831.4-201ENST00000620744 325 ntBASIC3.13□□□□□ -1.91
USP20Q9Y2K6 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC3.13□□□□□ -1.91
USP20Q9Y2K6 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
USP20Q9Y2K6 RNU6-268P-201ENST00000364174 107 ntBASIC3.12□□□□□ -1.91
USP20Q9Y2K6 Y_RNA.323-201ENST00000365157 109 ntBASIC3.12□□□□□ -1.91
USP20Q9Y2K6 MIR181B1-201ENST00000385240 110 ntBASIC3.12□□□□□ -1.91
USP20Q9Y2K6 MIR1262-201ENST00000408276 93 ntBASIC3.12□□□□□ -1.91
USP20Q9Y2K6 RAB6C-AS1-202ENST00000433431 123 ntBASIC3.12□□□□□ -1.91
USP20Q9Y2K6 HMGN2P32-201ENST00000444648 269 ntBASIC3.12□□□□□ -1.91
USP20Q9Y2K6 AC087499.4-201ENST00000448505 178 ntBASIC3.12□□□□□ -1.91
USP20Q9Y2K6 RNA5SP367-201ENST00000516557 118 ntBASIC3.12□□□□□ -1.91
USP20Q9Y2K6 MIR5582-201ENST00000579697 68 ntBASIC3.12□□□□□ -1.91
USP20Q9Y2K6 AC022217.4-201ENST00000604389 163 ntBASIC3.12□□□□□ -1.91
USP20Q9Y2K6 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
USP20Q9Y2K6 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
USP20Q9Y2K6 RNU6-349P-201ENST00000362402 107 ntBASIC3.11□□□□□ -1.91
USP20Q9Y2K6 Y_RNA.37-201ENST00000362606 108 ntBASIC3.11□□□□□ -1.91
USP20Q9Y2K6 Y_RNA.328-201ENST00000365208 113 ntBASIC3.11□□□□□ -1.91
USP20Q9Y2K6 SNORA2.2-201ENST00000365473 135 ntBASIC3.11□□□□□ -1.91
USP20Q9Y2K6 MIR1302-5-201ENST00000408164 150 ntBASIC3.11□□□□□ -1.91
USP20Q9Y2K6 RN7SL499P-201ENST00000481141 276 ntBASIC3.11□□□□□ -1.91
USP20Q9Y2K6 MIR3169-201ENST00000578032 83 ntBASIC3.11□□□□□ -1.91
USP20Q9Y2K6 MIR6733-201ENST00000635723 61 ntBASIC3.11□□□□□ -1.91
USP20Q9Y2K6 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.11□□□□□ -1.91
USP20Q9Y2K6 SNORD68-201ENST00000363214 84 ntBASIC3.1□□□□□ -1.91
USP20Q9Y2K6 Y_RNA.163-201ENST00000363702 113 ntBASIC3.1□□□□□ -1.91
USP20Q9Y2K6 SNORA5B-201ENST00000363786 132 ntBASIC3.1□□□□□ -1.91
USP20Q9Y2K6 Y_RNA.213-201ENST00000364178 111 ntBASIC3.1□□□□□ -1.91
USP20Q9Y2K6 Y_RNA.547-201ENST00000384654 119 ntBASIC3.1□□□□□ -1.91
USP20Q9Y2K6 AL590004.2-201ENST00000404787 371 ntBASIC3.1□□□□□ -1.91
USP20Q9Y2K6 RNU7-25P-201ENST00000516544 62 ntBASIC3.1□□□□□ -1.91
USP20Q9Y2K6 SNORD45.4-201ENST00000516629 73 ntBASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms