Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 Y_RNA.164-201ENST00000363709 102 ntBASIC2.17□□□□□ -2.06
SSX2IPQ9Y2D8 Y_RNA.338-201ENST00000365320 114 ntBASIC2.17□□□□□ -2.06
SSX2IPQ9Y2D8 MIR518A2-201ENST00000384966 87 ntBASIC2.17□□□□□ -2.06
SSX2IPQ9Y2D8 HMGN2P39-201ENST00000398005 273 ntBASIC2.17□□□□□ -2.06
SSX2IPQ9Y2D8 RNU2-2P-201ENST00000410396 191 ntBASIC2.17□□□□□ -2.06
SSX2IPQ9Y2D8 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC2.17□□□□□ -2.06
SSX2IPQ9Y2D8 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.17□□□□□ -2.06
SSX2IPQ9Y2D8 RPS26P45-201ENST00000471748 340 ntBASIC2.17□□□□□ -2.06
SSX2IPQ9Y2D8 RNU1-40P-201ENST00000516816 164 ntBASIC2.17□□□□□ -2.06
SSX2IPQ9Y2D8 RNU1-97P-201ENST00000516872 164 ntBASIC2.17□□□□□ -2.06
SSX2IPQ9Y2D8 MIR2681-201ENST00000581814 105 ntBASIC2.17□□□□□ -2.06
SSX2IPQ9Y2D8 RNU2-4P-201ENST00000606190 192 ntBASIC2.17□□□□□ -2.06
SSX2IPQ9Y2D8 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.17□□□□□ -2.06
SSX2IPQ9Y2D8 uc_338.20-201ENST00000621563 178 ntBASIC2.17□□□□□ -2.06
SSX2IPQ9Y2D8 MIR6079-201ENST00000635807 62 ntBASIC2.17□□□□□ -2.06
SSX2IPQ9Y2D8 AC100821.1-201ENST00000523153 2479 ntBASIC2.17□□□□□ -2.06
SSX2IPQ9Y2D8 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
SSX2IPQ9Y2D8 Y_RNA.240-201ENST00000364469 95 ntBASIC2.16□□□□□ -2.06
SSX2IPQ9Y2D8 MIR616-201ENST00000385293 97 ntBASIC2.16□□□□□ -2.06
SSX2IPQ9Y2D8 RNA5SP496-201ENST00000391240 109 ntBASIC2.16□□□□□ -2.06
SSX2IPQ9Y2D8 AL512604.1-201ENST00000404812 257 ntBASIC2.16□□□□□ -2.06
SSX2IPQ9Y2D8 RNU6-383P-201ENST00000410864 94 ntBASIC2.16□□□□□ -2.06
SSX2IPQ9Y2D8 AC099677.2-201ENST00000436385 175 ntBASIC2.16□□□□□ -2.06
SSX2IPQ9Y2D8 AC091021.1-201ENST00000468051 388 ntBASIC2.16□□□□□ -2.06
SSX2IPQ9Y2D8 AC055731.1-201ENST00000474387 401 ntBASIC2.16□□□□□ -2.06
SSX2IPQ9Y2D8 RNU2-19P-201ENST00000517288 84 ntBASIC2.16□□□□□ -2.06
SSX2IPQ9Y2D8 AL358944.1-201ENST00000528537 144 ntBASIC2.16□□□□□ -2.06
SSX2IPQ9Y2D8 AC091178.2-201ENST00000584401 117 ntBASIC2.16□□□□□ -2.06
SSX2IPQ9Y2D8 AL627230.6-201ENST00000611129 280 ntBASIC2.16□□□□□ -2.06
SSX2IPQ9Y2D8 AL391903.3-201ENST00000612158 163 ntBASIC2.16□□□□□ -2.06
SSX2IPQ9Y2D8 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.16□□□□□ -2.06
SSX2IPQ9Y2D8 AC022513.1-201ENST00000624512 117 ntBASIC2.16□□□□□ -2.06
SSX2IPQ9Y2D8 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
SSX2IPQ9Y2D8 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.15□□□□□ -2.06
SSX2IPQ9Y2D8 Y_RNA.4-201ENST00000362333 112 ntBASIC2.15□□□□□ -2.07
SSX2IPQ9Y2D8 SNORA33-201ENST00000363664 130 ntBASIC2.15□□□□□ -2.07
SSX2IPQ9Y2D8 Y_RNA.182-201ENST00000363880 111 ntBASIC2.15□□□□□ -2.07
SSX2IPQ9Y2D8 snoU2_19.4-201ENST00000364329 80 ntBASIC2.15□□□□□ -2.07
SSX2IPQ9Y2D8 MIR1283-2-201ENST00000408621 87 ntBASIC2.15□□□□□ -2.07
SSX2IPQ9Y2D8 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC2.15□□□□□ -2.07
SSX2IPQ9Y2D8 AL163195.1-201ENST00000496941 348 ntBASIC2.15□□□□□ -2.07
SSX2IPQ9Y2D8 Y_RNA.797-201ENST00000515977 94 ntBASIC2.15□□□□□ -2.07
SSX2IPQ9Y2D8 RNU6-1219P-201ENST00000516143 112 ntBASIC2.15□□□□□ -2.07
SSX2IPQ9Y2D8 RNU6-341P-201ENST00000516973 96 ntBASIC2.15□□□□□ -2.07
SSX2IPQ9Y2D8 MIR4287-201ENST00000579398 78 ntBASIC2.15□□□□□ -2.07
SSX2IPQ9Y2D8 MIR4744-201ENST00000581563 82 ntBASIC2.15□□□□□ -2.07
SSX2IPQ9Y2D8 MIR3935-201ENST00000583472 104 ntBASIC2.15□□□□□ -2.07
SSX2IPQ9Y2D8 AL929325.1-201ENST00000603096 117 ntBASIC2.15□□□□□ -2.07
SSX2IPQ9Y2D8 AC069114.2-201ENST00000604699 304 ntBASIC2.15□□□□□ -2.07
SSX2IPQ9Y2D8 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.15□□□□□ -2.07
SSX2IPQ9Y2D8 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.15□□□□□ -2.07
SSX2IPQ9Y2D8 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.14□□□□□ -2.07
SSX2IPQ9Y2D8 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.14□□□□□ -2.07
SSX2IPQ9Y2D8 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
SSX2IPQ9Y2D8 Y_RNA.203-201ENST00000364106 102 ntBASIC2.14□□□□□ -2.07
SSX2IPQ9Y2D8 Y_RNA.229-201ENST00000364347 113 ntBASIC2.14□□□□□ -2.07
SSX2IPQ9Y2D8 RNU6-1019P-201ENST00000364424 107 ntBASIC2.14□□□□□ -2.07
SSX2IPQ9Y2D8 RNU4-41P-201ENST00000364426 143 ntBASIC2.14□□□□□ -2.07
SSX2IPQ9Y2D8 Y_RNA.464-201ENST00000384282 110 ntBASIC2.14□□□□□ -2.07
SSX2IPQ9Y2D8 Y_RNA.572-201ENST00000384757 98 ntBASIC2.14□□□□□ -2.07
SSX2IPQ9Y2D8 MIR597-201ENST00000384968 97 ntBASIC2.14□□□□□ -2.07
SSX2IPQ9Y2D8 PCNPP3-201ENST00000393579 471 ntBASIC2.14□□□□□ -2.07
SSX2IPQ9Y2D8 RNA5SP338-201ENST00000410495 85 ntBASIC2.14□□□□□ -2.07
SSX2IPQ9Y2D8 AC069257.2-201ENST00000441819 155 ntBASIC2.14□□□□□ -2.07
SSX2IPQ9Y2D8 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC2.14□□□□□ -2.07
SSX2IPQ9Y2D8 AC233266.1-201ENST00000454518 96 ntBASIC2.14□□□□□ -2.07
SSX2IPQ9Y2D8 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC2.14□□□□□ -2.07
SSX2IPQ9Y2D8 MRPS17P9-201ENST00000511924 393 ntBASIC2.14□□□□□ -2.07
SSX2IPQ9Y2D8 AC242852.1-201ENST00000612151 96 ntBASIC2.14□□□□□ -2.07
SSX2IPQ9Y2D8 Y_RNA.783-201ENST00000613546 102 ntBASIC2.14□□□□□ -2.07
SSX2IPQ9Y2D8 AC244015.1-201ENST00000622301 99 ntBASIC2.14□□□□□ -2.07
SSX2IPQ9Y2D8 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC2.14□□□□□ -2.07
SSX2IPQ9Y2D8 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.13□□□□□ -2.07
SSX2IPQ9Y2D8 Y_RNA.75-201ENST00000362927 97 ntBASIC2.13□□□□□ -2.07
SSX2IPQ9Y2D8 RNU6-312P-201ENST00000364629 107 ntBASIC2.13□□□□□ -2.07
SSX2IPQ9Y2D8 RNU6-1062P-201ENST00000383908 107 ntBASIC2.13□□□□□ -2.07
SSX2IPQ9Y2D8 RNU6-1228P-201ENST00000391014 107 ntBASIC2.13□□□□□ -2.07
SSX2IPQ9Y2D8 Y_RNA.621-201ENST00000411065 96 ntBASIC2.13□□□□□ -2.07
SSX2IPQ9Y2D8 AC245047.8-201ENST00000456455 284 ntBASIC2.13□□□□□ -2.07
SSX2IPQ9Y2D8 MRPS18CP4-201ENST00000535821 231 ntBASIC2.13□□□□□ -2.07
SSX2IPQ9Y2D8 MIR5002-201ENST00000584713 97 ntBASIC2.13□□□□□ -2.07
SSX2IPQ9Y2D8 MIR6845-201ENST00000613182 61 ntBASIC2.13□□□□□ -2.07
SSX2IPQ9Y2D8 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.13□□□□□ -2.07
SSX2IPQ9Y2D8 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
SSX2IPQ9Y2D8 Y_RNA.23-201ENST00000362496 106 ntBASIC2.12□□□□□ -2.07
SSX2IPQ9Y2D8 Y_RNA.267-201ENST00000364679 109 ntBASIC2.12□□□□□ -2.07
SSX2IPQ9Y2D8 RNY3P5-201ENST00000384127 102 ntBASIC2.12□□□□□ -2.07
SSX2IPQ9Y2D8 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
SSX2IPQ9Y2D8 RN7SKP101-201ENST00000411376 320 ntBASIC2.12□□□□□ -2.07
SSX2IPQ9Y2D8 AL445685.2-201ENST00000422551 342 ntBASIC2.12□□□□□ -2.07
SSX2IPQ9Y2D8 AL021397.1-201ENST00000451806 248 ntBASIC2.12□□□□□ -2.07
SSX2IPQ9Y2D8 AC023449.1-201ENST00000454464 154 ntBASIC2.12□□□□□ -2.07
SSX2IPQ9Y2D8 SCARNA8-201ENST00000515924 131 ntBASIC2.12□□□□□ -2.07
SSX2IPQ9Y2D8 RNU6-1007P-201ENST00000516586 107 ntBASIC2.12□□□□□ -2.07
SSX2IPQ9Y2D8 RNU6-1291P-201ENST00000516591 104 ntBASIC2.12□□□□□ -2.07
SSX2IPQ9Y2D8 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC2.12□□□□□ -2.07
SSX2IPQ9Y2D8 Y_RNA.140-201ENST00000363474 103 ntBASIC2.11□□□□□ -2.07
SSX2IPQ9Y2D8 RNU6-275P-201ENST00000364910 107 ntBASIC2.11□□□□□ -2.07
SSX2IPQ9Y2D8 Y_RNA.412-201ENST00000384001 104 ntBASIC2.11□□□□□ -2.07
SSX2IPQ9Y2D8 RNU6-578P-201ENST00000390980 103 ntBASIC2.11□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 182.2 ms