Protein–RNA interactions for Protein: Q9UQ88

CDK11A, Cyclin-dependent kinase 11A, humanhuman

Predicted RBP Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11AQ9UQ88 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC2.67□□□□□ -1.98
CDK11AQ9UQ88 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
CDK11AQ9UQ88 Y_RNA.65-201ENST00000362846 100 ntBASIC2.66□□□□□ -1.98
CDK11AQ9UQ88 RNU6-112P-201ENST00000363599 104 ntBASIC2.66□□□□□ -1.98
CDK11AQ9UQ88 MIR520A-201ENST00000384862 85 ntBASIC2.66□□□□□ -1.98
CDK11AQ9UQ88 SNORA26.5-201ENST00000391215 123 ntBASIC2.66□□□□□ -1.98
CDK11AQ9UQ88 MTCO2P33-201ENST00000402100 465 ntBASIC2.66□□□□□ -1.98
CDK11AQ9UQ88 RNU2-7P-201ENST00000410794 178 ntBASIC2.66□□□□□ -1.98
CDK11AQ9UQ88 RNU7-141P-201ENST00000459304 62 ntBASIC2.66□□□□□ -1.98
CDK11AQ9UQ88 Y_RNA.637-201ENST00000459424 114 ntBASIC2.66□□□□□ -1.98
CDK11AQ9UQ88 MIR4282-201ENST00000583613 67 ntBASIC2.66□□□□□ -1.98
CDK11AQ9UQ88 AC013791.1-201ENST00000616619 62 ntBASIC2.66□□□□□ -1.98
CDK11AQ9UQ88 AC073349.3-201ENST00000617616 186 ntBASIC2.66□□□□□ -1.98
CDK11AQ9UQ88 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.66□□□□□ -1.98
CDK11AQ9UQ88 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC2.65□□□□□ -1.98
CDK11AQ9UQ88 Y_RNA.122-201ENST00000363331 96 ntBASIC2.65□□□□□ -1.99
CDK11AQ9UQ88 RNU6-379P-201ENST00000363813 104 ntBASIC2.65□□□□□ -1.99
CDK11AQ9UQ88 RNU6-144P-201ENST00000383951 107 ntBASIC2.65□□□□□ -1.99
CDK11AQ9UQ88 SNORA72-201ENST00000384339 132 ntBASIC2.65□□□□□ -1.99
CDK11AQ9UQ88 Y_RNA.552-201ENST00000384665 112 ntBASIC2.65□□□□□ -1.99
CDK11AQ9UQ88 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
CDK11AQ9UQ88 SNORD58.1-201ENST00000391313 66 ntBASIC2.65□□□□□ -1.99
CDK11AQ9UQ88 MIR934-201ENST00000401241 83 ntBASIC2.65□□□□□ -1.99
CDK11AQ9UQ88 MIR1287-201ENST00000408492 90 ntBASIC2.65□□□□□ -1.99
CDK11AQ9UQ88 AC245047.4-201ENST00000433189 144 ntBASIC2.65□□□□□ -1.99
CDK11AQ9UQ88 AC091021.1-201ENST00000468051 388 ntBASIC2.65□□□□□ -1.99
CDK11AQ9UQ88 AC117454.1-201ENST00000491120 168 ntBASIC2.65□□□□□ -1.99
CDK11AQ9UQ88 AC005840.1-201ENST00000498412 377 ntBASIC2.65□□□□□ -1.99
CDK11AQ9UQ88 RNU6-1096P-201ENST00000517089 102 ntBASIC2.65□□□□□ -1.99
CDK11AQ9UQ88 MIR5692C2-201ENST00000577959 77 ntBASIC2.65□□□□□ -1.99
CDK11AQ9UQ88 AL512598.1-201ENST00000610158 273 ntBASIC2.65□□□□□ -1.99
CDK11AQ9UQ88 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
CDK11AQ9UQ88 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC2.65□□□□□ -1.99
CDK11AQ9UQ88 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC2.65□□□□□ -1.99
CDK11AQ9UQ88 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
CDK11AQ9UQ88 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
CDK11AQ9UQ88 RNU6-211P-201ENST00000384047 107 ntBASIC2.64□□□□□ -1.99
CDK11AQ9UQ88 RNU6-950P-201ENST00000384651 107 ntBASIC2.64□□□□□ -1.99
CDK11AQ9UQ88 RNU6-847P-201ENST00000411115 108 ntBASIC2.64□□□□□ -1.99
CDK11AQ9UQ88 SNORD2.1-201ENST00000458762 69 ntBASIC2.64□□□□□ -1.99
CDK11AQ9UQ88 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC2.64□□□□□ -1.99
CDK11AQ9UQ88 TRMT112P2-201ENST00000512910 132 ntBASIC2.64□□□□□ -1.99
CDK11AQ9UQ88 AL358944.1-201ENST00000528537 144 ntBASIC2.64□□□□□ -1.99
CDK11AQ9UQ88 AC024405.2-202ENST00000532731 184 ntBASIC2.64□□□□□ -1.99
CDK11AQ9UQ88 CBX3P4-201ENST00000538909 354 ntBASIC2.64□□□□□ -1.99
CDK11AQ9UQ88 MIR3671-201ENST00000580455 88 ntBASIC2.64□□□□□ -1.99
CDK11AQ9UQ88 AC091178.2-201ENST00000584401 117 ntBASIC2.64□□□□□ -1.99
CDK11AQ9UQ88 AL442067.1-201ENST00000613261 223 ntBASIC2.64□□□□□ -1.99
CDK11AQ9UQ88 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC2.64□□□□□ -1.99
CDK11AQ9UQ88 RNU6-1205P-201ENST00000363625 106 ntBASIC2.63□□□□□ -1.99
CDK11AQ9UQ88 RNU6-1048P-201ENST00000364054 107 ntBASIC2.63□□□□□ -1.99
CDK11AQ9UQ88 Y_RNA.267-201ENST00000364679 109 ntBASIC2.63□□□□□ -1.99
CDK11AQ9UQ88 U8.7-201ENST00000364940 136 ntBASIC2.63□□□□□ -1.99
CDK11AQ9UQ88 Y_RNA.515-201ENST00000384535 112 ntBASIC2.63□□□□□ -1.99
CDK11AQ9UQ88 Y_RNA.539-201ENST00000384635 107 ntBASIC2.63□□□□□ -1.99
CDK11AQ9UQ88 RNU2-14P-201ENST00000411053 191 ntBASIC2.63□□□□□ -1.99
CDK11AQ9UQ88 RPS4XP11-201ENST00000446897 772 ntBASIC2.63□□□□□ -1.99
CDK11AQ9UQ88 RNU6-111P-201ENST00000517179 105 ntBASIC2.63□□□□□ -1.99
CDK11AQ9UQ88 MIR4419B-201ENST00000577260 68 ntBASIC2.63□□□□□ -1.99
CDK11AQ9UQ88 MIR4643-201ENST00000577473 78 ntBASIC2.63□□□□□ -1.99
CDK11AQ9UQ88 MIR8074-201ENST00000615081 81 ntBASIC2.63□□□□□ -1.99
CDK11AQ9UQ88 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC2.63□□□□□ -1.99
CDK11AQ9UQ88 AC134026.1-201ENST00000623249 2239 ntBASIC2.62□□□□□ -1.99
CDK11AQ9UQ88 SNORA63D-201ENST00000364359 132 ntBASIC2.62□□□□□ -1.99
CDK11AQ9UQ88 RNU6-338P-201ENST00000383888 105 ntBASIC2.62□□□□□ -1.99
CDK11AQ9UQ88 AC245047.3-201ENST00000429428 127 ntBASIC2.62□□□□□ -1.99
CDK11AQ9UQ88 AC233266.1-201ENST00000454518 96 ntBASIC2.62□□□□□ -1.99
CDK11AQ9UQ88 RNU7-95P-201ENST00000459222 64 ntBASIC2.62□□□□□ -1.99
CDK11AQ9UQ88 RPL23AP54-201ENST00000495129 419 ntBASIC2.62□□□□□ -1.99
CDK11AQ9UQ88 RNA5SP481-201ENST00000516814 122 ntBASIC2.62□□□□□ -1.99
CDK11AQ9UQ88 AP002004.2-201ENST00000531656 154 ntBASIC2.62□□□□□ -1.99
CDK11AQ9UQ88 AC011604.1-201ENST00000545978 196 ntBASIC2.62□□□□□ -1.99
CDK11AQ9UQ88 AC127455.1-201ENST00000565496 145 ntBASIC2.62□□□□□ -1.99
CDK11AQ9UQ88 AC005357.1-201ENST00000588399 301 ntBASIC2.62□□□□□ -1.99
CDK11AQ9UQ88 AL008718.3-201ENST00000610217 321 ntBASIC2.62□□□□□ -1.99
CDK11AQ9UQ88 AC242852.1-201ENST00000612151 96 ntBASIC2.62□□□□□ -1.99
CDK11AQ9UQ88 AC141273.2-201ENST00000618989 130 ntBASIC2.62□□□□□ -1.99
CDK11AQ9UQ88 AC244015.1-201ENST00000622301 99 ntBASIC2.62□□□□□ -1.99
CDK11AQ9UQ88 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC2.62□□□□□ -1.99
CDK11AQ9UQ88 AC100821.1-201ENST00000523153 2479 ntBASIC2.62□□□□□ -1.99
CDK11AQ9UQ88 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
CDK11AQ9UQ88 Y_RNA.269-201ENST00000364685 89 ntBASIC2.61□□□□□ -1.99
CDK11AQ9UQ88 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
CDK11AQ9UQ88 SNORA36B-201ENST00000410438 131 ntBASIC2.61□□□□□ -1.99
CDK11AQ9UQ88 Y_RNA.621-201ENST00000411065 96 ntBASIC2.61□□□□□ -1.99
CDK11AQ9UQ88 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC2.61□□□□□ -1.99
CDK11AQ9UQ88 PLD1-217ENST00000627725 174 ntTSL 5 BASIC2.61□□□□□ -1.99
CDK11AQ9UQ88 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
CDK11AQ9UQ88 Y_RNA.292-201ENST00000364904 97 ntBASIC2.6□□□□□ -1.99
CDK11AQ9UQ88 Y_RNA.293-201ENST00000364908 93 ntBASIC2.6□□□□□ -1.99
CDK11AQ9UQ88 RNU6-296P-201ENST00000384608 107 ntBASIC2.6□□□□□ -1.99
CDK11AQ9UQ88 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC2.6□□□□□ -1.99
CDK11AQ9UQ88 RNU6-1291P-201ENST00000516591 104 ntBASIC2.6□□□□□ -1.99
CDK11AQ9UQ88 RNU2-56P-201ENST00000516826 190 ntBASIC2.6□□□□□ -1.99
CDK11AQ9UQ88 RNU6-388P-201ENST00000517012 105 ntBASIC2.6□□□□□ -1.99
CDK11AQ9UQ88 RNU6-389P-201ENST00000517048 105 ntBASIC2.6□□□□□ -1.99
CDK11AQ9UQ88 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC2.6□□□□□ -1.99
CDK11AQ9UQ88 AC022217.4-201ENST00000604389 163 ntBASIC2.6□□□□□ -1.99
CDK11AQ9UQ88 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
CDK11AQ9UQ88 MIR424-201ENST00000362227 98 ntBASIC2.59□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 110.4 ms