Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
ZC3H4Q9UPT8 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
ZC3H4Q9UPT8 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.67□□□□□ -1.82
ZC3H4Q9UPT8 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
ZC3H4Q9UPT8 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.67□□□□□ -1.82
ZC3H4Q9UPT8 SNORD56.3-201ENST00000363507 71 ntBASIC3.67□□□□□ -1.82
ZC3H4Q9UPT8 RNU6-414P-201ENST00000363705 104 ntBASIC3.67□□□□□ -1.82
ZC3H4Q9UPT8 Y_RNA.213-201ENST00000364178 111 ntBASIC3.67□□□□□ -1.82
ZC3H4Q9UPT8 RNU6-1131P-201ENST00000364955 107 ntBASIC3.67□□□□□ -1.82
ZC3H4Q9UPT8 RNU6-1014P-201ENST00000383940 103 ntBASIC3.67□□□□□ -1.82
ZC3H4Q9UPT8 MIR592-201ENST00000384959 97 ntBASIC3.67□□□□□ -1.82
ZC3H4Q9UPT8 MIR1302-4-201ENST00000408701 150 ntBASIC3.67□□□□□ -1.82
ZC3H4Q9UPT8 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.67□□□□□ -1.82
ZC3H4Q9UPT8 RNU1-143P-201ENST00000516296 146 ntBASIC3.67□□□□□ -1.82
ZC3H4Q9UPT8 RNA5SP24-201ENST00000516478 95 ntBASIC3.67□□□□□ -1.82
ZC3H4Q9UPT8 RNY4P20-201ENST00000516678 93 ntBASIC3.67□□□□□ -1.82
ZC3H4Q9UPT8 RPPH1-2P-201ENST00000516688 293 ntBASIC3.67□□□□□ -1.82
ZC3H4Q9UPT8 U1.23-201ENST00000610293 146 ntBASIC3.67□□□□□ -1.82
ZC3H4Q9UPT8 RNU1-68P-201ENST00000615382 146 ntBASIC3.67□□□□□ -1.82
ZC3H4Q9UPT8 U1.39-201ENST00000621562 146 ntBASIC3.67□□□□□ -1.82
ZC3H4Q9UPT8 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.66□□□□□ -1.82
ZC3H4Q9UPT8 RNU6-1084P-201ENST00000362498 107 ntBASIC3.66□□□□□ -1.82
ZC3H4Q9UPT8 RNU6-640P-201ENST00000363693 105 ntBASIC3.66□□□□□ -1.82
ZC3H4Q9UPT8 SNORD14E-201ENST00000364009 85 ntBASIC3.66□□□□□ -1.82
ZC3H4Q9UPT8 MIR522-201ENST00000385071 87 ntBASIC3.66□□□□□ -1.82
ZC3H4Q9UPT8 MIR759-201ENST00000390224 91 ntBASIC3.66□□□□□ -1.82
ZC3H4Q9UPT8 SNORD67-201ENST00000390833 111 ntBASIC3.66□□□□□ -1.82
ZC3H4Q9UPT8 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC3.66□□□□□ -1.82
ZC3H4Q9UPT8 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC3.66□□□□□ -1.82
ZC3H4Q9UPT8 VTRNA2-2P-201ENST00000516091 103 ntBASIC3.66□□□□□ -1.82
ZC3H4Q9UPT8 RNA5SP281-201ENST00000516504 135 ntBASIC3.66□□□□□ -1.82
ZC3H4Q9UPT8 AP002004.2-201ENST00000531656 154 ntBASIC3.66□□□□□ -1.82
ZC3H4Q9UPT8 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.66□□□□□ -1.82
ZC3H4Q9UPT8 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC3.66□□□□□ -1.82
ZC3H4Q9UPT8 AP001318.4-201ENST00000616637 121 ntBASIC3.66□□□□□ -1.82
ZC3H4Q9UPT8 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC3.65□□□□□ -1.82
ZC3H4Q9UPT8 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.65□□□□□ -1.82
ZC3H4Q9UPT8 SNORA38-201ENST00000363946 132 ntBASIC3.65□□□□□ -1.83
ZC3H4Q9UPT8 RNU6-294P-201ENST00000364999 102 ntBASIC3.65□□□□□ -1.83
ZC3H4Q9UPT8 RNU6-1189P-201ENST00000383958 107 ntBASIC3.65□□□□□ -1.83
ZC3H4Q9UPT8 MIR561-201ENST00000385216 97 ntBASIC3.65□□□□□ -1.83
ZC3H4Q9UPT8 MIR181B1-201ENST00000385240 110 ntBASIC3.65□□□□□ -1.83
ZC3H4Q9UPT8 RNU2-48P-201ENST00000410694 191 ntBASIC3.65□□□□□ -1.83
ZC3H4Q9UPT8 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC3.65□□□□□ -1.83
ZC3H4Q9UPT8 CST9LP2-201ENST00000437612 320 ntBASIC3.65□□□□□ -1.83
ZC3H4Q9UPT8 SNORD109B-201ENST00000458961 67 ntBASIC3.65□□□□□ -1.83
ZC3H4Q9UPT8 SNORD109A-201ENST00000459128 67 ntBASIC3.65□□□□□ -1.83
ZC3H4Q9UPT8 RNU7-25P-201ENST00000516544 62 ntBASIC3.65□□□□□ -1.83
ZC3H4Q9UPT8 RNA5SP380-201ENST00000517190 98 ntBASIC3.65□□□□□ -1.83
ZC3H4Q9UPT8 AL358944.1-201ENST00000528537 144 ntBASIC3.65□□□□□ -1.83
ZC3H4Q9UPT8 AC134878.1-201ENST00000619901 243 ntBASIC3.65□□□□□ -1.83
ZC3H4Q9UPT8 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC3.65□□□□□ -1.83
ZC3H4Q9UPT8 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
ZC3H4Q9UPT8 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC3.64□□□□□ -1.83
ZC3H4Q9UPT8 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
ZC3H4Q9UPT8 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
ZC3H4Q9UPT8 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.64□□□□□ -1.83
ZC3H4Q9UPT8 SNORD73B-201ENST00000364394 72 ntBASIC3.64□□□□□ -1.83
ZC3H4Q9UPT8 RNU6-442P-201ENST00000383968 104 ntBASIC3.64□□□□□ -1.83
ZC3H4Q9UPT8 RNU6-1113P-201ENST00000384348 107 ntBASIC3.64□□□□□ -1.83
ZC3H4Q9UPT8 MIR196B-201ENST00000384852 84 ntBASIC3.64□□□□□ -1.83
ZC3H4Q9UPT8 MIR9-1-201ENST00000385198 89 ntBASIC3.64□□□□□ -1.83
ZC3H4Q9UPT8 AL353689.1-201ENST00000438895 199 ntBASIC3.64□□□□□ -1.83
ZC3H4Q9UPT8 ATP5J2P3-201ENST00000451550 258 ntBASIC3.64□□□□□ -1.83
ZC3H4Q9UPT8 HMGN1P18-201ENST00000457642 277 ntBASIC3.64□□□□□ -1.83
ZC3H4Q9UPT8 snoU13.15-201ENST00000459407 104 ntBASIC3.64□□□□□ -1.83
ZC3H4Q9UPT8 SNORA64.4-201ENST00000516632 81 ntBASIC3.64□□□□□ -1.83
ZC3H4Q9UPT8 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC3.64□□□□□ -1.83
ZC3H4Q9UPT8 AC064859.1-201ENST00000624741 174 ntBASIC3.64□□□□□ -1.83
ZC3H4Q9UPT8 Clostridiales-1.3-201ENST00000637703 147 ntBASIC3.64□□□□□ -1.83
ZC3H4Q9UPT8 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.64□□□□□ -1.83
ZC3H4Q9UPT8 AC008264.2-201ENST00000610193 3731 ntBASIC3.64□□□□□ -1.83
ZC3H4Q9UPT8 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
ZC3H4Q9UPT8 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.63□□□□□ -1.83
ZC3H4Q9UPT8 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
ZC3H4Q9UPT8 AC073325.2-201ENST00000339545 159 ntBASIC3.63□□□□□ -1.83
ZC3H4Q9UPT8 Y_RNA.198-201ENST00000364013 98 ntBASIC3.63□□□□□ -1.83
ZC3H4Q9UPT8 SNORA67.4-201ENST00000384688 142 ntBASIC3.63□□□□□ -1.83
ZC3H4Q9UPT8 RN7SKP192-201ENST00000411291 327 ntBASIC3.63□□□□□ -1.83
ZC3H4Q9UPT8 FTH1P12-201ENST00000432137 551 ntBASIC3.63□□□□□ -1.83
ZC3H4Q9UPT8 SNORA40.13-201ENST00000516379 120 ntBASIC3.63□□□□□ -1.83
ZC3H4Q9UPT8 IGKV3-31-201ENST00000523109 329 ntBASIC3.63□□□□□ -1.83
ZC3H4Q9UPT8 AC004486.1-201ENST00000546846 233 ntBASIC3.63□□□□□ -1.83
ZC3H4Q9UPT8 AC079600.2-201ENST00000550076 130 ntBASIC3.63□□□□□ -1.83
ZC3H4Q9UPT8 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC3.63□□□□□ -1.83
ZC3H4Q9UPT8 AC021443.1-201ENST00000604478 211 ntBASIC3.63□□□□□ -1.83
ZC3H4Q9UPT8 U6.108-201ENST00000637764 58 ntBASIC3.63□□□□□ -1.83
ZC3H4Q9UPT8 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
ZC3H4Q9UPT8 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
ZC3H4Q9UPT8 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
ZC3H4Q9UPT8 RNU6-859P-201ENST00000362728 107 ntBASIC3.62□□□□□ -1.83
ZC3H4Q9UPT8 RNY4P6-201ENST00000363667 96 ntBASIC3.62□□□□□ -1.83
ZC3H4Q9UPT8 U8.6-201ENST00000364939 135 ntBASIC3.62□□□□□ -1.83
ZC3H4Q9UPT8 Y_RNA.362-201ENST00000365518 110 ntBASIC3.62□□□□□ -1.83
ZC3H4Q9UPT8 Y_RNA.410-201ENST00000383992 113 ntBASIC3.62□□□□□ -1.83
ZC3H4Q9UPT8 U8.17-201ENST00000391292 132 ntBASIC3.62□□□□□ -1.83
ZC3H4Q9UPT8 RNA5SP492-201ENST00000411330 114 ntBASIC3.62□□□□□ -1.83
ZC3H4Q9UPT8 RNU7-94P-201ENST00000459576 63 ntBASIC3.62□□□□□ -1.83
ZC3H4Q9UPT8 RNU6-970P-201ENST00000516312 107 ntBASIC3.62□□□□□ -1.83
ZC3H4Q9UPT8 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC3.62□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms