Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC3.83□□□□□ -1.8
LHX6Q9UPM6 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
LHX6Q9UPM6 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.83□□□□□ -1.8
LHX6Q9UPM6 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.83□□□□□ -1.8
LHX6Q9UPM6 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
LHX6Q9UPM6 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
LHX6Q9UPM6 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC3.82□□□□□ -1.8
LHX6Q9UPM6 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
LHX6Q9UPM6 SNORD74.4-201ENST00000364129 80 ntBASIC3.82□□□□□ -1.8
LHX6Q9UPM6 RNU6-800P-201ENST00000384473 103 ntBASIC3.82□□□□□ -1.8
LHX6Q9UPM6 RNU6-1328P-201ENST00000410938 106 ntBASIC3.82□□□□□ -1.8
LHX6Q9UPM6 RNU7-48P-201ENST00000458875 63 ntBASIC3.82□□□□□ -1.8
LHX6Q9UPM6 SEM1P1-201ENST00000506694 209 ntBASIC3.82□□□□□ -1.8
LHX6Q9UPM6 FGF7P7-201ENST00000514120 227 ntBASIC3.82□□□□□ -1.8
LHX6Q9UPM6 AC100770.1-201ENST00000532310 322 ntBASIC3.82□□□□□ -1.8
LHX6Q9UPM6 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC3.82□□□□□ -1.8
LHX6Q9UPM6 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.82□□□□□ -1.8
LHX6Q9UPM6 MIR8054-201ENST00000620877 86 ntBASIC3.82□□□□□ -1.8
LHX6Q9UPM6 UCA1.1-201ENST00000620952 75 ntBASIC3.82□□□□□ -1.8
LHX6Q9UPM6 PLD1-217ENST00000627725 174 ntTSL 5 BASIC3.82□□□□□ -1.8
LHX6Q9UPM6 MIR1297-201ENST00000637311 77 ntBASIC3.82□□□□□ -1.8
LHX6Q9UPM6 AC007336.1-201ENST00000576365 3828 ntBASIC3.82□□□□□ -1.8
LHX6Q9UPM6 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC3.82□□□□□ -1.8
LHX6Q9UPM6 ZNF962P-201ENST00000443465 3140 ntBASIC3.81□□□□□ -1.8
LHX6Q9UPM6 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC3.81□□□□□ -1.8
LHX6Q9UPM6 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC3.81□□□□□ -1.8
LHX6Q9UPM6 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
LHX6Q9UPM6 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.81□□□□□ -1.8
LHX6Q9UPM6 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.81□□□□□ -1.8
LHX6Q9UPM6 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
LHX6Q9UPM6 RNU6-161P-201ENST00000363051 106 ntBASIC3.81□□□□□ -1.8
LHX6Q9UPM6 Y_RNA.99-201ENST00000363138 105 ntBASIC3.81□□□□□ -1.8
LHX6Q9UPM6 RNU6-471P-201ENST00000383944 106 ntBASIC3.81□□□□□ -1.8
LHX6Q9UPM6 Y_RNA.508-201ENST00000384502 114 ntBASIC3.81□□□□□ -1.8
LHX6Q9UPM6 RNU6-296P-201ENST00000384608 107 ntBASIC3.81□□□□□ -1.8
LHX6Q9UPM6 RNU6-1077P-201ENST00000410506 102 ntBASIC3.81□□□□□ -1.8
LHX6Q9UPM6 RNU6-602P-201ENST00000411155 105 ntBASIC3.81□□□□□ -1.8
LHX6Q9UPM6 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC3.81□□□□□ -1.8
LHX6Q9UPM6 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.81□□□□□ -1.8
LHX6Q9UPM6 RPS29P19-201ENST00000479709 171 ntBASIC3.81□□□□□ -1.8
LHX6Q9UPM6 AC006064.5-201ENST00000541782 248 ntBASIC3.81□□□□□ -1.8
LHX6Q9UPM6 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.81□□□□□ -1.8
LHX6Q9UPM6 MIR3199-1-201ENST00000582434 88 ntBASIC3.81□□□□□ -1.8
LHX6Q9UPM6 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.81□□□□□ -1.8
LHX6Q9UPM6 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC3.81□□□□□ -1.8
LHX6Q9UPM6 MIR7151-201ENST00000617477 60 ntBASIC3.81□□□□□ -1.8
LHX6Q9UPM6 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.81□□□□□ -1.8
LHX6Q9UPM6 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
LHX6Q9UPM6 AC091152.2-201ENST00000591628 2569 ntBASIC3.81□□□□□ -1.8
LHX6Q9UPM6 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
LHX6Q9UPM6 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
LHX6Q9UPM6 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.8□□□□□ -1.8
LHX6Q9UPM6 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC3.8□□□□□ -1.8
LHX6Q9UPM6 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
LHX6Q9UPM6 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.8□□□□□ -1.8
LHX6Q9UPM6 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC3.8□□□□□ -1.8
LHX6Q9UPM6 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
LHX6Q9UPM6 MIR592-201ENST00000384959 97 ntBASIC3.8□□□□□ -1.8
LHX6Q9UPM6 RNA5SP109-201ENST00000391010 116 ntBASIC3.8□□□□□ -1.8
LHX6Q9UPM6 AC006483.1-201ENST00000487308 313 ntBASIC3.8□□□□□ -1.8
LHX6Q9UPM6 MIR4796-201ENST00000580742 81 ntBASIC3.8□□□□□ -1.8
LHX6Q9UPM6 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
LHX6Q9UPM6 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
LHX6Q9UPM6 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
LHX6Q9UPM6 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.8□□□□□ -1.8
LHX6Q9UPM6 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
LHX6Q9UPM6 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
LHX6Q9UPM6 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
LHX6Q9UPM6 RNU5F-1-201ENST00000362507 117 ntBASIC3.79□□□□□ -1.8
LHX6Q9UPM6 SNORD30.1-201ENST00000391309 70 ntBASIC3.79□□□□□ -1.8
LHX6Q9UPM6 MIR1911-201ENST00000410783 80 ntBASIC3.79□□□□□ -1.8
LHX6Q9UPM6 RNU6-1086P-201ENST00000410930 100 ntBASIC3.79□□□□□ -1.8
LHX6Q9UPM6 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC3.79□□□□□ -1.8
LHX6Q9UPM6 SNORA71B-202ENST00000439232 272 ntBASIC3.79□□□□□ -1.8
LHX6Q9UPM6 RNU7-79P-201ENST00000516082 62 ntBASIC3.79□□□□□ -1.8
LHX6Q9UPM6 RNU7-137P-201ENST00000516788 62 ntBASIC3.79□□□□□ -1.8
LHX6Q9UPM6 RNU6-667P-201ENST00000517186 102 ntBASIC3.79□□□□□ -1.8
LHX6Q9UPM6 AC087499.8-201ENST00000578406 226 ntBASIC3.79□□□□□ -1.8
LHX6Q9UPM6 AL512598.1-201ENST00000610158 273 ntBASIC3.79□□□□□ -1.8
LHX6Q9UPM6 MIR8058-201ENST00000615737 89 ntBASIC3.79□□□□□ -1.8
LHX6Q9UPM6 AC105081.1-201ENST00000617727 106 ntBASIC3.79□□□□□ -1.8
LHX6Q9UPM6 AC243994.1-201ENST00000618627 109 ntBASIC3.79□□□□□ -1.8
LHX6Q9UPM6 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.79□□□□□ -1.8
LHX6Q9UPM6 AP001362.1-201ENST00000625165 124 ntBASIC3.79□□□□□ -1.8
LHX6Q9UPM6 U6.111-201ENST00000636093 83 ntBASIC3.79□□□□□ -1.8
LHX6Q9UPM6 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC3.79□□□□□ -1.8
LHX6Q9UPM6 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
LHX6Q9UPM6 GABRG2-229ENST00000641017 3628 ntBASIC3.79□□□□□ -1.8
LHX6Q9UPM6 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
LHX6Q9UPM6 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC3.78□□□□□ -1.8
LHX6Q9UPM6 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC3.78□□□□□ -1.8
LHX6Q9UPM6 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
LHX6Q9UPM6 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.78□□□□□ -1.8
LHX6Q9UPM6 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
LHX6Q9UPM6 AC093908.1-201ENST00000623125 8092 ntBASIC3.78□□□□□ -1.8
LHX6Q9UPM6 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
LHX6Q9UPM6 SNORA38.1-201ENST00000364172 131 ntBASIC3.78□□□□□ -1.8
LHX6Q9UPM6 Y_RNA.532-201ENST00000384590 113 ntBASIC3.78□□□□□ -1.8
LHX6Q9UPM6 RNU6-160P-201ENST00000384591 107 ntBASIC3.78□□□□□ -1.8
LHX6Q9UPM6 MIR561-201ENST00000385216 97 ntBASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 108.2 ms