Protein–RNA interactions for Protein: Q9UJV9

DDX41, Probable ATP-dependent RNA helicase DDX41, humanhuman

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41Q9UJV9 RNVU1-2-201ENST00000516326 135 ntBASIC2.77□□□□□ -1.97
DDX41Q9UJV9 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC2.77□□□□□ -1.97
DDX41Q9UJV9 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
DDX41Q9UJV9 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.76□□□□□ -1.97
DDX41Q9UJV9 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
DDX41Q9UJV9 U8.2-201ENST00000363156 134 ntBASIC2.76□□□□□ -1.97
DDX41Q9UJV9 SNORD45.3-201ENST00000363836 72 ntBASIC2.76□□□□□ -1.97
DDX41Q9UJV9 Y_RNA.337-201ENST00000365312 102 ntBASIC2.76□□□□□ -1.97
DDX41Q9UJV9 RNU6-449P-201ENST00000383914 107 ntBASIC2.76□□□□□ -1.97
DDX41Q9UJV9 RNU6-643P-201ENST00000384018 107 ntBASIC2.76□□□□□ -1.97
DDX41Q9UJV9 RNU6-804P-201ENST00000384286 107 ntBASIC2.76□□□□□ -1.97
DDX41Q9UJV9 MIR802-201ENST00000390235 94 ntBASIC2.76□□□□□ -1.97
DDX41Q9UJV9 Y_RNA.580-201ENST00000391004 95 ntBASIC2.76□□□□□ -1.97
DDX41Q9UJV9 RN7SKP200-201ENST00000410564 320 ntBASIC2.76□□□□□ -1.97
DDX41Q9UJV9 RNU4-43P-201ENST00000410628 137 ntBASIC2.76□□□□□ -1.97
DDX41Q9UJV9 RNU5E-9P-201ENST00000411164 104 ntBASIC2.76□□□□□ -1.97
DDX41Q9UJV9 AC006461.1-201ENST00000412637 326 ntBASIC2.76□□□□□ -1.97
DDX41Q9UJV9 RPS27P1-201ENST00000450552 247 ntBASIC2.76□□□□□ -1.97
DDX41Q9UJV9 MIR5092-201ENST00000583139 88 ntBASIC2.76□□□□□ -1.97
DDX41Q9UJV9 AL591926.4-201ENST00000616895 298 ntBASIC2.76□□□□□ -1.97
DDX41Q9UJV9 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC2.76□□□□□ -1.97
DDX41Q9UJV9 MIR8054-201ENST00000620877 86 ntBASIC2.76□□□□□ -1.97
DDX41Q9UJV9 AC012640.5-201ENST00000623897 319 ntBASIC2.76□□□□□ -1.97
DDX41Q9UJV9 SNORD68-201ENST00000363214 84 ntBASIC2.75□□□□□ -1.97
DDX41Q9UJV9 SNORD114-30-201ENST00000364448 72 ntBASIC2.75□□□□□ -1.97
DDX41Q9UJV9 MIR504-201ENST00000385065 83 ntBASIC2.75□□□□□ -1.97
DDX41Q9UJV9 RNU6-440P-201ENST00000390882 105 ntBASIC2.75□□□□□ -1.97
DDX41Q9UJV9 SNRPGP8-201ENST00000454064 226 ntBASIC2.75□□□□□ -1.97
DDX41Q9UJV9 snoU13.26-201ENST00000459452 105 ntBASIC2.75□□□□□ -1.97
DDX41Q9UJV9 AC234781.5-201ENST00000508429 271 ntBASIC2.75□□□□□ -1.97
DDX41Q9UJV9 SNORD77.4-201ENST00000516158 81 ntBASIC2.75□□□□□ -1.97
DDX41Q9UJV9 RNU6-255P-201ENST00000516957 105 ntBASIC2.75□□□□□ -1.97
DDX41Q9UJV9 IGLV3-17-201ENST00000519099 244 ntBASIC2.75□□□□□ -1.97
DDX41Q9UJV9 AC021753.1-201ENST00000635724 168 ntBASIC2.75□□□□□ -1.97
DDX41Q9UJV9 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
DDX41Q9UJV9 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.75□□□□□ -1.97
DDX41Q9UJV9 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
DDX41Q9UJV9 ZNF720P1-201ENST00000562403 1939 ntBASIC2.74□□□□□ -1.97
DDX41Q9UJV9 AC016717.2-201ENST00000609089 5141 ntBASIC2.74□□□□□ -1.97
DDX41Q9UJV9 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
DDX41Q9UJV9 RNU6-746P-201ENST00000384112 109 ntBASIC2.74□□□□□ -1.97
DDX41Q9UJV9 RNU2-70P-201ENST00000410718 179 ntBASIC2.74□□□□□ -1.97
DDX41Q9UJV9 RNA5SP450-201ENST00000411206 102 ntBASIC2.74□□□□□ -1.97
DDX41Q9UJV9 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC2.74□□□□□ -1.97
DDX41Q9UJV9 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC2.74□□□□□ -1.97
DDX41Q9UJV9 AL606517.2-201ENST00000442855 241 ntBASIC2.74□□□□□ -1.97
DDX41Q9UJV9 RNU6-561P-201ENST00000516222 102 ntBASIC2.74□□□□□ -1.97
DDX41Q9UJV9 RNA5SP481-201ENST00000516814 122 ntBASIC2.74□□□□□ -1.97
DDX41Q9UJV9 SUB1P4-201ENST00000566062 339 ntBASIC2.74□□□□□ -1.97
DDX41Q9UJV9 AC046143.2-201ENST00000609789 160 ntBASIC2.74□□□□□ -1.97
DDX41Q9UJV9 Pinc.1-201ENST00000616452 154 ntBASIC2.74□□□□□ -1.97
DDX41Q9UJV9 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.74□□□□□ -1.97
DDX41Q9UJV9 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.74□□□□□ -1.97
DDX41Q9UJV9 SNORA63D-201ENST00000364359 132 ntBASIC2.73□□□□□ -1.97
DDX41Q9UJV9 RNU6-1138P-201ENST00000365359 106 ntBASIC2.73□□□□□ -1.97
DDX41Q9UJV9 SNORA12.1-201ENST00000390873 148 ntBASIC2.73□□□□□ -1.97
DDX41Q9UJV9 AL034345.1-201ENST00000407768 123 ntBASIC2.73□□□□□ -1.97
DDX41Q9UJV9 FTH1P12-201ENST00000432137 551 ntBASIC2.73□□□□□ -1.97
DDX41Q9UJV9 AC011753.1-201ENST00000451001 220 ntBASIC2.73□□□□□ -1.97
DDX41Q9UJV9 RNA5SP153-201ENST00000516498 76 ntBASIC2.73□□□□□ -1.97
DDX41Q9UJV9 RNU7-149P-201ENST00000516739 59 ntBASIC2.73□□□□□ -1.97
DDX41Q9UJV9 AC103810.6-201ENST00000606708 136 ntBASIC2.73□□□□□ -1.97
DDX41Q9UJV9 MIR7843-201ENST00000622274 79 ntBASIC2.73□□□□□ -1.97
DDX41Q9UJV9 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.73□□□□□ -1.97
DDX41Q9UJV9 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.73□□□□□ -1.97
DDX41Q9UJV9 RNU6-1084P-201ENST00000362498 107 ntBASIC2.72□□□□□ -1.97
DDX41Q9UJV9 SNORD116-18-201ENST00000383961 92 ntBASIC2.72□□□□□ -1.97
DDX41Q9UJV9 Y_RNA.521-201ENST00000384560 114 ntBASIC2.72□□□□□ -1.97
DDX41Q9UJV9 MIR144-201ENST00000384886 86 ntBASIC2.72□□□□□ -1.97
DDX41Q9UJV9 MIR522-201ENST00000385071 87 ntBASIC2.72□□□□□ -1.97
DDX41Q9UJV9 SNORD23.1-201ENST00000408212 104 ntBASIC2.72□□□□□ -1.97
DDX41Q9UJV9 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
DDX41Q9UJV9 STAG3L5P-204ENST00000443759 179 ntBASIC2.72□□□□□ -1.97
DDX41Q9UJV9 snoU13.15-201ENST00000459407 104 ntBASIC2.72□□□□□ -1.97
DDX41Q9UJV9 AC079804.2-201ENST00000490376 200 ntBASIC2.72□□□□□ -1.97
DDX41Q9UJV9 RNU2-19P-201ENST00000517288 84 ntBASIC2.72□□□□□ -1.97
DDX41Q9UJV9 AL160236.1-201ENST00000556317 195 ntBASIC2.72□□□□□ -1.97
DDX41Q9UJV9 MIR1291-201ENST00000627649 87 ntBASIC2.72□□□□□ -1.97
DDX41Q9UJV9 Y_RNA.398-201ENST00000383952 99 ntBASIC2.71□□□□□ -1.98
DDX41Q9UJV9 AC026436.1-201ENST00000510537 270 ntBASIC2.71□□□□□ -1.98
DDX41Q9UJV9 RNU6-197P-201ENST00000516680 100 ntBASIC2.71□□□□□ -1.98
DDX41Q9UJV9 Y_RNA.703-201ENST00000516846 111 ntBASIC2.71□□□□□ -1.98
DDX41Q9UJV9 AC121758.2-201ENST00000553271 193 ntBASIC2.71□□□□□ -1.98
DDX41Q9UJV9 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC2.71□□□□□ -1.98
DDX41Q9UJV9 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
DDX41Q9UJV9 RNU6-112P-201ENST00000363599 104 ntBASIC2.7□□□□□ -1.98
DDX41Q9UJV9 Y_RNA.170-201ENST00000363746 110 ntBASIC2.7□□□□□ -1.98
DDX41Q9UJV9 RNA5SP425-201ENST00000410336 112 ntBASIC2.7□□□□□ -1.98
DDX41Q9UJV9 RNU7-121P-201ENST00000516604 62 ntBASIC2.7□□□□□ -1.98
DDX41Q9UJV9 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
DDX41Q9UJV9 U8.5-201ENST00000364528 136 ntBASIC2.69□□□□□ -1.98
DDX41Q9UJV9 snoU2-30.1-201ENST00000365012 70 ntBASIC2.69□□□□□ -1.98
DDX41Q9UJV9 RNY1P5-201ENST00000383890 115 ntBASIC2.69□□□□□ -1.98
DDX41Q9UJV9 Y_RNA.506-201ENST00000384494 102 ntBASIC2.69□□□□□ -1.98
DDX41Q9UJV9 RN7SKP223-201ENST00000410582 62 ntBASIC2.69□□□□□ -1.98
DDX41Q9UJV9 RPL30P13-201ENST00000418873 348 ntBASIC2.69□□□□□ -1.98
DDX41Q9UJV9 NDUFA4P2-201ENST00000489989 244 ntBASIC2.69□□□□□ -1.98
DDX41Q9UJV9 RNU7-200P-201ENST00000516105 62 ntBASIC2.69□□□□□ -1.98
DDX41Q9UJV9 RNA5SP281-201ENST00000516504 135 ntBASIC2.69□□□□□ -1.98
DDX41Q9UJV9 RNU6-365P-201ENST00000517113 106 ntBASIC2.69□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 170.5 ms