Protein–RNA interactions for Protein: Q9UHP3

USP25, Ubiquitin carboxyl-terminal hydrolase 25, humanhuman

Predictions only

Length 1,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP25Q9UHP3 MIR1278-201ENST00000408753 81 ntBASIC2.37□□□□□ -2.03
USP25Q9UHP3 RNU2-40P-201ENST00000410833 196 ntBASIC2.37□□□□□ -2.03
USP25Q9UHP3 CST2P1-201ENST00000425770 87 ntBASIC2.37□□□□□ -2.03
USP25Q9UHP3 AC099677.2-201ENST00000436385 175 ntBASIC2.37□□□□□ -2.03
USP25Q9UHP3 RPL23AP6-201ENST00000446637 472 ntBASIC2.37□□□□□ -2.03
USP25Q9UHP3 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.37□□□□□ -2.03
USP25Q9UHP3 snoU13.26-201ENST00000459452 105 ntBASIC2.37□□□□□ -2.03
USP25Q9UHP3 RPL23AP54-201ENST00000495129 419 ntBASIC2.37□□□□□ -2.03
USP25Q9UHP3 RNU6-453P-201ENST00000516819 85 ntBASIC2.37□□□□□ -2.03
USP25Q9UHP3 RNA5SP364-201ENST00000516938 78 ntBASIC2.37□□□□□ -2.03
USP25Q9UHP3 AC109810.1-201ENST00000534066 224 ntBASIC2.37□□□□□ -2.03
USP25Q9UHP3 MIR5094-201ENST00000578766 85 ntBASIC2.37□□□□□ -2.03
USP25Q9UHP3 MIR4431-201ENST00000579990 94 ntBASIC2.37□□□□□ -2.03
USP25Q9UHP3 AL021707.8-201ENST00000609428 183 ntBASIC2.37□□□□□ -2.03
USP25Q9UHP3 RNU4-13P-201ENST00000364019 141 ntBASIC2.36□□□□□ -2.03
USP25Q9UHP3 SNORD50.2-201ENST00000365465 70 ntBASIC2.36□□□□□ -2.03
USP25Q9UHP3 Y_RNA.357-201ENST00000365487 109 ntBASIC2.36□□□□□ -2.03
USP25Q9UHP3 MIR504-201ENST00000385065 83 ntBASIC2.36□□□□□ -2.03
USP25Q9UHP3 RNU6-239P-201ENST00000390990 99 ntBASIC2.36□□□□□ -2.03
USP25Q9UHP3 RNU6-383P-201ENST00000410864 94 ntBASIC2.36□□□□□ -2.03
USP25Q9UHP3 RN7SKP101-201ENST00000411376 320 ntBASIC2.36□□□□□ -2.03
USP25Q9UHP3 AC244636.1-201ENST00000421152 228 ntBASIC2.36□□□□□ -2.03
USP25Q9UHP3 AL356320.1-201ENST00000429616 163 ntBASIC2.36□□□□□ -2.03
USP25Q9UHP3 RPS4XP11-201ENST00000446897 772 ntBASIC2.36□□□□□ -2.03
USP25Q9UHP3 RNA5SP57-201ENST00000459463 123 ntBASIC2.36□□□□□ -2.03
USP25Q9UHP3 RNU6-1007P-201ENST00000516586 107 ntBASIC2.36□□□□□ -2.03
USP25Q9UHP3 RNU7-121P-201ENST00000516604 62 ntBASIC2.36□□□□□ -2.03
USP25Q9UHP3 RNU7-128P-201ENST00000517247 62 ntBASIC2.36□□□□□ -2.03
USP25Q9UHP3 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC2.36□□□□□ -2.03
USP25Q9UHP3 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC2.36□□□□□ -2.03
USP25Q9UHP3 SUB1P4-201ENST00000566062 339 ntBASIC2.36□□□□□ -2.03
USP25Q9UHP3 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC2.36□□□□□ -2.03
USP25Q9UHP3 AC069114.2-201ENST00000604699 304 ntBASIC2.36□□□□□ -2.03
USP25Q9UHP3 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.36□□□□□ -2.03
USP25Q9UHP3 MIR7843-201ENST00000622274 79 ntBASIC2.36□□□□□ -2.03
USP25Q9UHP3 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC2.36□□□□□ -2.03
USP25Q9UHP3 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
USP25Q9UHP3 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
USP25Q9UHP3 Y_RNA.8-201ENST00000362353 102 ntBASIC2.35□□□□□ -2.03
USP25Q9UHP3 MIR515-2-201ENST00000384883 83 ntBASIC2.35□□□□□ -2.03
USP25Q9UHP3 MIR515-1-201ENST00000384884 83 ntBASIC2.35□□□□□ -2.03
USP25Q9UHP3 RNA5SP496-201ENST00000391240 109 ntBASIC2.35□□□□□ -2.03
USP25Q9UHP3 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC2.35□□□□□ -2.03
USP25Q9UHP3 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC2.35□□□□□ -2.03
USP25Q9UHP3 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.35□□□□□ -2.03
USP25Q9UHP3 AC245047.8-201ENST00000456455 284 ntBASIC2.35□□□□□ -2.03
USP25Q9UHP3 RNU6-237P-201ENST00000515985 71 ntBASIC2.35□□□□□ -2.03
USP25Q9UHP3 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.35□□□□□ -2.03
USP25Q9UHP3 MIR4299-201ENST00000577899 72 ntBASIC2.35□□□□□ -2.03
USP25Q9UHP3 MIR3910-1-201ENST00000580936 111 ntBASIC2.35□□□□□ -2.03
USP25Q9UHP3 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.35□□□□□ -2.03
USP25Q9UHP3 uc_338.20-201ENST00000621563 178 ntBASIC2.35□□□□□ -2.03
USP25Q9UHP3 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.35□□□□□ -2.03
USP25Q9UHP3 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.34□□□□□ -2.03
USP25Q9UHP3 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.34□□□□□ -2.03
USP25Q9UHP3 RNU6-1130P-201ENST00000365434 107 ntBASIC2.34□□□□□ -2.03
USP25Q9UHP3 RNU6-449P-201ENST00000383914 107 ntBASIC2.34□□□□□ -2.03
USP25Q9UHP3 SNORD116-18-201ENST00000383961 92 ntBASIC2.34□□□□□ -2.03
USP25Q9UHP3 RNU6-417P-201ENST00000384712 107 ntBASIC2.34□□□□□ -2.03
USP25Q9UHP3 RNU6-376P-201ENST00000384731 106 ntBASIC2.34□□□□□ -2.03
USP25Q9UHP3 AL606845.1-201ENST00000404881 255 ntBASIC2.34□□□□□ -2.03
USP25Q9UHP3 RNA5SP425-201ENST00000410336 112 ntBASIC2.34□□□□□ -2.03
USP25Q9UHP3 RNU4-43P-201ENST00000410628 137 ntBASIC2.34□□□□□ -2.03
USP25Q9UHP3 RNU7-99P-201ENST00000516271 62 ntBASIC2.34□□□□□ -2.03
USP25Q9UHP3 AL096840.1-201ENST00000603287 93 ntBASIC2.34□□□□□ -2.03
USP25Q9UHP3 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.34□□□□□ -2.03
USP25Q9UHP3 AL627230.6-201ENST00000611129 280 ntBASIC2.34□□□□□ -2.03
USP25Q9UHP3 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
USP25Q9UHP3 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.33□□□□□ -2.04
USP25Q9UHP3 MIR520G-201ENST00000385064 90 ntBASIC2.33□□□□□ -2.04
USP25Q9UHP3 MIR613-201ENST00000385248 95 ntBASIC2.33□□□□□ -2.04
USP25Q9UHP3 MT-TT-201ENST00000387460 66 ntBASIC2.33□□□□□ -2.04
USP25Q9UHP3 RNU11-5P-201ENST00000391216 129 ntBASIC2.33□□□□□ -2.04
USP25Q9UHP3 RPS29P21-201ENST00000496272 170 ntBASIC2.33□□□□□ -2.04
USP25Q9UHP3 AC107027.2-201ENST00000512197 115 ntBASIC2.33□□□□□ -2.04
USP25Q9UHP3 AL359075.3-201ENST00000613288 217 ntBASIC2.33□□□□□ -2.04
USP25Q9UHP3 AC100821.1-201ENST00000523153 2479 ntBASIC2.33□□□□□ -2.04
USP25Q9UHP3 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.32□□□□□ -2.04
USP25Q9UHP3 AC092881.1-201ENST00000638218 2733 ntBASIC2.32□□□□□ -2.04
USP25Q9UHP3 RNU6-1019P-201ENST00000364424 107 ntBASIC2.32□□□□□ -2.04
USP25Q9UHP3 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.32□□□□□ -2.04
USP25Q9UHP3 RNA5SP100-201ENST00000410903 110 ntBASIC2.32□□□□□ -2.04
USP25Q9UHP3 RNA5SP59-201ENST00000410922 110 ntBASIC2.32□□□□□ -2.04
USP25Q9UHP3 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC2.32□□□□□ -2.04
USP25Q9UHP3 TMSB4XP3-201ENST00000445144 114 ntBASIC2.32□□□□□ -2.04
USP25Q9UHP3 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.32□□□□□ -2.04
USP25Q9UHP3 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC2.32□□□□□ -2.04
USP25Q9UHP3 AC091178.2-201ENST00000584401 117 ntBASIC2.32□□□□□ -2.04
USP25Q9UHP3 AL929325.1-201ENST00000603096 117 ntBASIC2.32□□□□□ -2.04
USP25Q9UHP3 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.32□□□□□ -2.04
USP25Q9UHP3 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.32□□□□□ -2.04
USP25Q9UHP3 U6.108-201ENST00000637764 58 ntBASIC2.32□□□□□ -2.04
USP25Q9UHP3 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
USP25Q9UHP3 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC2.31□□□□□ -2.04
USP25Q9UHP3 Y_RNA.203-201ENST00000364106 102 ntBASIC2.31□□□□□ -2.04
USP25Q9UHP3 RNU6-704P-201ENST00000364162 103 ntBASIC2.31□□□□□ -2.04
USP25Q9UHP3 RNU6-728P-201ENST00000365375 104 ntBASIC2.31□□□□□ -2.04
USP25Q9UHP3 Y_RNA.400-201ENST00000383963 111 ntBASIC2.31□□□□□ -2.04
USP25Q9UHP3 MIR15B-201ENST00000385045 98 ntBASIC2.31□□□□□ -2.04
USP25Q9UHP3 Z98742.3-201ENST00000418637 326 ntBASIC2.31□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 160.2 ms