Protein–RNA interactions for Protein: Q9UBP4

DKK3, Dickkopf-related protein 3, humanhuman

Predictions only

Length 350 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKK3Q9UBP4 AL359075.3-201ENST00000613288 217 ntBASIC2.23□□□□□ -2.05
DKK3Q9UBP4 MIR6132-201ENST00000622083 109 ntBASIC2.23□□□□□ -2.05
DKK3Q9UBP4 WWP1P1-201ENST00000466609 2769 ntBASIC2.22□□□□□ -2.05
DKK3Q9UBP4 RNA5SP493-201ENST00000364115 91 ntBASIC2.22□□□□□ -2.05
DKK3Q9UBP4 Y_RNA.272-201ENST00000364696 102 ntBASIC2.22□□□□□ -2.05
DKK3Q9UBP4 RNU6-804P-201ENST00000384286 107 ntBASIC2.22□□□□□ -2.05
DKK3Q9UBP4 RNU6-376P-201ENST00000384731 106 ntBASIC2.22□□□□□ -2.05
DKK3Q9UBP4 MIR520G-201ENST00000385064 90 ntBASIC2.22□□□□□ -2.05
DKK3Q9UBP4 MIR29C-201ENST00000385231 88 ntBASIC2.22□□□□□ -2.05
DKK3Q9UBP4 RNU6-383P-201ENST00000410864 94 ntBASIC2.22□□□□□ -2.05
DKK3Q9UBP4 HMGN2P19-201ENST00000425149 265 ntBASIC2.22□□□□□ -2.05
DKK3Q9UBP4 ATP5J2P3-201ENST00000451550 258 ntBASIC2.22□□□□□ -2.05
DKK3Q9UBP4 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC2.22□□□□□ -2.05
DKK3Q9UBP4 RNA5SP445-201ENST00000515889 115 ntBASIC2.22□□□□□ -2.05
DKK3Q9UBP4 RNU7-200P-201ENST00000516105 62 ntBASIC2.22□□□□□ -2.05
DKK3Q9UBP4 RNU6-1041P-201ENST00000516254 102 ntBASIC2.22□□□□□ -2.05
DKK3Q9UBP4 AC109810.1-201ENST00000534066 224 ntBASIC2.22□□□□□ -2.05
DKK3Q9UBP4 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC2.22□□□□□ -2.05
DKK3Q9UBP4 MIR4498-201ENST00000577599 66 ntBASIC2.22□□□□□ -2.05
DKK3Q9UBP4 MIR3169-201ENST00000578032 83 ntBASIC2.22□□□□□ -2.05
DKK3Q9UBP4 AL627230.6-201ENST00000611129 280 ntBASIC2.22□□□□□ -2.05
DKK3Q9UBP4 MIR6873-201ENST00000622788 63 ntBASIC2.22□□□□□ -2.05
DKK3Q9UBP4 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.22□□□□□ -2.05
DKK3Q9UBP4 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.05
DKK3Q9UBP4 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.21□□□□□ -2.06
DKK3Q9UBP4 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
DKK3Q9UBP4 RNU6-1164P-201ENST00000364428 107 ntBASIC2.21□□□□□ -2.06
DKK3Q9UBP4 Y_RNA.357-201ENST00000365487 109 ntBASIC2.21□□□□□ -2.06
DKK3Q9UBP4 AL512604.1-201ENST00000404812 257 ntBASIC2.21□□□□□ -2.06
DKK3Q9UBP4 CST2P1-201ENST00000425770 87 ntBASIC2.21□□□□□ -2.06
DKK3Q9UBP4 AC245517.4-201ENST00000448601 281 ntBASIC2.21□□□□□ -2.06
DKK3Q9UBP4 AC245047.8-201ENST00000456455 284 ntBASIC2.21□□□□□ -2.06
DKK3Q9UBP4 SCARNA16.3-201ENST00000516595 184 ntBASIC2.21□□□□□ -2.06
DKK3Q9UBP4 RNU7-121P-201ENST00000516604 62 ntBASIC2.21□□□□□ -2.06
DKK3Q9UBP4 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.21□□□□□ -2.06
DKK3Q9UBP4 AC024995.1-201ENST00000523014 93 ntBASIC2.21□□□□□ -2.06
DKK3Q9UBP4 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC2.21□□□□□ -2.06
DKK3Q9UBP4 MIR2681-201ENST00000581814 105 ntBASIC2.21□□□□□ -2.06
DKK3Q9UBP4 MIR3133-201ENST00000583157 78 ntBASIC2.21□□□□□ -2.06
DKK3Q9UBP4 AC091178.2-201ENST00000584401 117 ntBASIC2.21□□□□□ -2.06
DKK3Q9UBP4 AL021707.8-201ENST00000609428 183 ntBASIC2.21□□□□□ -2.06
DKK3Q9UBP4 U6.108-201ENST00000637764 58 ntBASIC2.21□□□□□ -2.06
DKK3Q9UBP4 AP000553.5-201ENST00000641933 54 ntBASIC2.21□□□□□ -2.06
DKK3Q9UBP4 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
DKK3Q9UBP4 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.2□□□□□ -2.06
DKK3Q9UBP4 RNU6-136P-201ENST00000384663 107 ntBASIC2.2□□□□□ -2.06
DKK3Q9UBP4 RNU6-239P-201ENST00000390990 99 ntBASIC2.2□□□□□ -2.06
DKK3Q9UBP4 SEPT7P4-201ENST00000437076 306 ntBASIC2.2□□□□□ -2.06
DKK3Q9UBP4 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.2□□□□□ -2.06
DKK3Q9UBP4 RNU6-406P-201ENST00000516470 107 ntBASIC2.2□□□□□ -2.06
DKK3Q9UBP4 RNA5SP137-201ENST00000516833 135 ntBASIC2.2□□□□□ -2.06
DKK3Q9UBP4 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC2.2□□□□□ -2.06
DKK3Q9UBP4 AC104465.1-201ENST00000611365 139 ntBASIC2.2□□□□□ -2.06
DKK3Q9UBP4 AC022202.1-201ENST00000613515 211 ntBASIC2.2□□□□□ -2.06
DKK3Q9UBP4 uc_338.20-201ENST00000621563 178 ntBASIC2.2□□□□□ -2.06
DKK3Q9UBP4 AC100821.1-201ENST00000523153 2479 ntBASIC2.2□□□□□ -2.06
DKK3Q9UBP4 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC2.19□□□□□ -2.06
DKK3Q9UBP4 MIR337-201ENST00000362281 93 ntBASIC2.19□□□□□ -2.06
DKK3Q9UBP4 RNU6-774P-201ENST00000363238 107 ntBASIC2.19□□□□□ -2.06
DKK3Q9UBP4 Y_RNA.203-201ENST00000364106 102 ntBASIC2.19□□□□□ -2.06
DKK3Q9UBP4 MT-TT-201ENST00000387460 66 ntBASIC2.19□□□□□ -2.06
DKK3Q9UBP4 RNA5SP467-201ENST00000391274 118 ntBASIC2.19□□□□□ -2.06
DKK3Q9UBP4 AL606845.1-201ENST00000404881 255 ntBASIC2.19□□□□□ -2.06
DKK3Q9UBP4 RNU6-1186P-201ENST00000410429 97 ntBASIC2.19□□□□□ -2.06
DKK3Q9UBP4 RNU4-43P-201ENST00000410628 137 ntBASIC2.19□□□□□ -2.06
DKK3Q9UBP4 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.19□□□□□ -2.06
DKK3Q9UBP4 RPS26P45-201ENST00000471748 340 ntBASIC2.19□□□□□ -2.06
DKK3Q9UBP4 MRPS17P9-201ENST00000511924 393 ntBASIC2.19□□□□□ -2.06
DKK3Q9UBP4 RNU6-1007P-201ENST00000516586 107 ntBASIC2.19□□□□□ -2.06
DKK3Q9UBP4 RNU1-142P-201ENST00000516682 145 ntBASIC2.19□□□□□ -2.06
DKK3Q9UBP4 RNU6-789P-201ENST00000517105 102 ntBASIC2.19□□□□□ -2.06
DKK3Q9UBP4 MTND5P41-201ENST00000517498 206 ntBASIC2.19□□□□□ -2.06
DKK3Q9UBP4 AL358944.1-201ENST00000528537 144 ntBASIC2.19□□□□□ -2.06
DKK3Q9UBP4 AC011604.1-201ENST00000545978 196 ntBASIC2.19□□□□□ -2.06
DKK3Q9UBP4 MIR4781-201ENST00000585250 76 ntBASIC2.19□□□□□ -2.06
DKK3Q9UBP4 AL031274.2-201ENST00000599419 203 ntBASIC2.19□□□□□ -2.06
DKK3Q9UBP4 AL929325.1-201ENST00000603096 117 ntBASIC2.19□□□□□ -2.06
DKK3Q9UBP4 AC073413.2-201ENST00000604332 360 ntBASIC2.19□□□□□ -2.06
DKK3Q9UBP4 MTND1P7-201ENST00000632801 297 ntBASIC2.19□□□□□ -2.06
DKK3Q9UBP4 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
DKK3Q9UBP4 AC018630.2-201ENST00000534866 2403 ntBASIC2.18□□□□□ -2.06
DKK3Q9UBP4 RNU1-58P-201ENST00000362413 163 ntBASIC2.18□□□□□ -2.06
DKK3Q9UBP4 Y_RNA.796-201ENST00000364268 102 ntBASIC2.18□□□□□ -2.06
DKK3Q9UBP4 RNU4-41P-201ENST00000364426 143 ntBASIC2.18□□□□□ -2.06
DKK3Q9UBP4 Y_RNA.799-201ENST00000364992 102 ntBASIC2.18□□□□□ -2.06
DKK3Q9UBP4 RNU6-728P-201ENST00000365375 104 ntBASIC2.18□□□□□ -2.06
DKK3Q9UBP4 RNU6-449P-201ENST00000383914 107 ntBASIC2.18□□□□□ -2.06
DKK3Q9UBP4 Y_RNA.398-201ENST00000383952 99 ntBASIC2.18□□□□□ -2.06
DKK3Q9UBP4 MIR562-201ENST00000384894 95 ntBASIC2.18□□□□□ -2.06
DKK3Q9UBP4 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
DKK3Q9UBP4 SNORA11.4-201ENST00000408823 129 ntBASIC2.18□□□□□ -2.06
DKK3Q9UBP4 RNU2-55P-201ENST00000411146 174 ntBASIC2.18□□□□□ -2.06
DKK3Q9UBP4 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC2.18□□□□□ -2.06
DKK3Q9UBP4 RNU6-341P-201ENST00000516973 96 ntBASIC2.18□□□□□ -2.06
DKK3Q9UBP4 RNU6-1096P-201ENST00000517089 102 ntBASIC2.18□□□□□ -2.06
DKK3Q9UBP4 TP73-AS1.1-201ENST00000611447 161 ntBASIC2.18□□□□□ -2.06
DKK3Q9UBP4 MIR219B-201ENST00000637023 88 ntBASIC2.18□□□□□ -2.06
DKK3Q9UBP4 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
DKK3Q9UBP4 SNORD50.2-201ENST00000365465 70 ntBASIC2.17□□□□□ -2.06
DKK3Q9UBP4 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC2.17□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 175.5 ms