Protein–RNA interactions for Protein: Q9P232

CNTN3, Contactin-3, humanhuman

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3Q9P232 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
CNTN3Q9P232 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC3.08□□□□□ -1.92
CNTN3Q9P232 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
CNTN3Q9P232 SNORA33-201ENST00000363664 130 ntBASIC3.08□□□□□ -1.92
CNTN3Q9P232 SNORD14E-201ENST00000364009 85 ntBASIC3.08□□□□□ -1.92
CNTN3Q9P232 Y_RNA.528-201ENST00000384575 108 ntBASIC3.08□□□□□ -1.92
CNTN3Q9P232 MIR1262-201ENST00000408276 93 ntBASIC3.08□□□□□ -1.92
CNTN3Q9P232 AC099677.2-201ENST00000436385 175 ntBASIC3.08□□□□□ -1.92
CNTN3Q9P232 RPS29P6-201ENST00000438196 145 ntBASIC3.08□□□□□ -1.92
CNTN3Q9P232 RNU7-28P-201ENST00000516759 62 ntBASIC3.08□□□□□ -1.92
CNTN3Q9P232 IGKV1-22-201ENST00000524313 326 ntBASIC3.08□□□□□ -1.92
CNTN3Q9P232 GTF3AP2-201ENST00000557014 266 ntBASIC3.08□□□□□ -1.92
CNTN3Q9P232 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
CNTN3Q9P232 AC131280.1-202ENST00000624067 4211 ntBASIC3.07□□□□□ -1.92
CNTN3Q9P232 AC008555.8-201ENST00000623602 2168 ntBASIC3.07□□□□□ -1.92
CNTN3Q9P232 RNU6-1084P-201ENST00000362498 107 ntBASIC3.07□□□□□ -1.92
CNTN3Q9P232 RNU6-862P-201ENST00000362804 105 ntBASIC3.07□□□□□ -1.92
CNTN3Q9P232 SNORD68-201ENST00000363214 84 ntBASIC3.07□□□□□ -1.92
CNTN3Q9P232 RNA5SP493-201ENST00000364115 91 ntBASIC3.07□□□□□ -1.92
CNTN3Q9P232 snoU2-30.1-201ENST00000365012 70 ntBASIC3.07□□□□□ -1.92
CNTN3Q9P232 RNA5SP482-201ENST00000391269 118 ntBASIC3.07□□□□□ -1.92
CNTN3Q9P232 RNA5SP356-201ENST00000515972 94 ntBASIC3.07□□□□□ -1.92
CNTN3Q9P232 RN7SKP132-201ENST00000516001 208 ntBASIC3.07□□□□□ -1.92
CNTN3Q9P232 AL137067.1-201ENST00000615933 120 ntBASIC3.07□□□□□ -1.92
CNTN3Q9P232 SCARNA15.3-201ENST00000626315 122 ntBASIC3.07□□□□□ -1.92
CNTN3Q9P232 SCARNA4.1-201ENST00000628597 123 ntBASIC3.07□□□□□ -1.92
CNTN3Q9P232 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
CNTN3Q9P232 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
CNTN3Q9P232 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
CNTN3Q9P232 RN7SKP123-201ENST00000410732 291 ntBASIC3.06□□□□□ -1.92
CNTN3Q9P232 AC087499.2-201ENST00000432861 149 ntBASIC3.06□□□□□ -1.92
CNTN3Q9P232 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC3.06□□□□□ -1.92
CNTN3Q9P232 RN7SL297P-201ENST00000483161 293 ntBASIC3.06□□□□□ -1.92
CNTN3Q9P232 COX6CP6-201ENST00000490840 228 ntBASIC3.06□□□□□ -1.92
CNTN3Q9P232 RPS26P48-201ENST00000491713 339 ntBASIC3.06□□□□□ -1.92
CNTN3Q9P232 AC079600.2-201ENST00000550076 130 ntBASIC3.06□□□□□ -1.92
CNTN3Q9P232 AC026271.5-201ENST00000577873 130 ntBASIC3.06□□□□□ -1.92
CNTN3Q9P232 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
CNTN3Q9P232 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC3.06□□□□□ -1.92
CNTN3Q9P232 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
CNTN3Q9P232 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
CNTN3Q9P232 Y_RNA.336-201ENST00000365307 109 ntBASIC3.05□□□□□ -1.92
CNTN3Q9P232 RNU6-1189P-201ENST00000383958 107 ntBASIC3.05□□□□□ -1.92
CNTN3Q9P232 MIR548O-201ENST00000408583 114 ntBASIC3.05□□□□□ -1.92
CNTN3Q9P232 SNORA11.4-201ENST00000408823 129 ntBASIC3.05□□□□□ -1.92
CNTN3Q9P232 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.05□□□□□ -1.92
CNTN3Q9P232 RNU6-168P-201ENST00000516189 101 ntBASIC3.05□□□□□ -1.92
CNTN3Q9P232 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC3.05□□□□□ -1.92
CNTN3Q9P232 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
CNTN3Q9P232 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
CNTN3Q9P232 SNORA5B-201ENST00000363786 132 ntBASIC3.04□□□□□ -1.92
CNTN3Q9P232 Y_RNA.281-201ENST00000364774 94 ntBASIC3.04□□□□□ -1.92
CNTN3Q9P232 MIR512-1-201ENST00000384913 84 ntBASIC3.04□□□□□ -1.92
CNTN3Q9P232 MIR570-201ENST00000384917 97 ntBASIC3.04□□□□□ -1.92
CNTN3Q9P232 AL031737.1-201ENST00000450125 223 ntBASIC3.04□□□□□ -1.92
CNTN3Q9P232 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC3.04□□□□□ -1.92
CNTN3Q9P232 AC004486.1-201ENST00000546846 233 ntBASIC3.04□□□□□ -1.92
CNTN3Q9P232 MIR3126-201ENST00000577443 74 ntBASIC3.04□□□□□ -1.92
CNTN3Q9P232 MIR3169-201ENST00000578032 83 ntBASIC3.04□□□□□ -1.92
CNTN3Q9P232 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.04□□□□□ -1.92
CNTN3Q9P232 RNU6-23P-201ENST00000363283 107 ntBASIC3.03□□□□□ -1.92
CNTN3Q9P232 SNORD115-28-201ENST00000363931 81 ntBASIC3.03□□□□□ -1.92
CNTN3Q9P232 RNU6-268P-201ENST00000364174 107 ntBASIC3.03□□□□□ -1.92
CNTN3Q9P232 MIR887-201ENST00000401258 79 ntBASIC3.03□□□□□ -1.92
CNTN3Q9P232 AL590004.2-201ENST00000404787 371 ntBASIC3.03□□□□□ -1.92
CNTN3Q9P232 CALM2P4-201ENST00000430810 426 ntBASIC3.03□□□□□ -1.92
CNTN3Q9P232 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC3.03□□□□□ -1.92
CNTN3Q9P232 AL109933.2-201ENST00000452651 260 ntBASIC3.03□□□□□ -1.92
CNTN3Q9P232 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC3.03□□□□□ -1.92
CNTN3Q9P232 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC3.03□□□□□ -1.92
CNTN3Q9P232 AC245060.5-201ENST00000610778 3293 ntBASIC3.02□□□□□ -1.93
CNTN3Q9P232 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.02□□□□□ -1.93
CNTN3Q9P232 SNORA2.2-201ENST00000365473 135 ntBASIC3.02□□□□□ -1.93
CNTN3Q9P232 RNU1-109P-201ENST00000383960 147 ntBASIC3.02□□□□□ -1.93
CNTN3Q9P232 RNU4ATAC16P-201ENST00000408512 126 ntBASIC3.02□□□□□ -1.93
CNTN3Q9P232 RNA5SP89-201ENST00000410300 108 ntBASIC3.02□□□□□ -1.93
CNTN3Q9P232 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC3.02□□□□□ -1.93
CNTN3Q9P232 HMGN2P32-201ENST00000444648 269 ntBASIC3.02□□□□□ -1.93
CNTN3Q9P232 SNORA59A-201ENST00000459326 152 ntBASIC3.02□□□□□ -1.93
CNTN3Q9P232 TRBV12-1-201ENST00000479785 344 ntBASIC3.02□□□□□ -1.93
CNTN3Q9P232 SNORD45.4-201ENST00000516629 73 ntBASIC3.02□□□□□ -1.93
CNTN3Q9P232 Y_RNA.694-201ENST00000516677 117 ntBASIC3.02□□□□□ -1.93
CNTN3Q9P232 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC3.02□□□□□ -1.93
CNTN3Q9P232 AC007012.1-201ENST00000567192 175 ntBASIC3.02□□□□□ -1.93
CNTN3Q9P232 Clostridiales-1.3-201ENST00000637703 147 ntBASIC3.02□□□□□ -1.93
CNTN3Q9P232 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
CNTN3Q9P232 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC3.02□□□□□ -1.93
CNTN3Q9P232 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.02□□□□□ -1.93
CNTN3Q9P232 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
CNTN3Q9P232 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
CNTN3Q9P232 Y_RNA.116-201ENST00000363292 103 ntBASIC3.01□□□□□ -1.93
CNTN3Q9P232 RNU6-1255P-201ENST00000363434 112 ntBASIC3.01□□□□□ -1.93
CNTN3Q9P232 Y_RNA.265-201ENST00000364677 108 ntBASIC3.01□□□□□ -1.93
CNTN3Q9P232 RNU1-91P-201ENST00000364746 163 ntBASIC3.01□□□□□ -1.93
CNTN3Q9P232 Y_RNA.366-201ENST00000365540 102 ntBASIC3.01□□□□□ -1.93
CNTN3Q9P232 RNU6-32P-201ENST00000383948 107 ntBASIC3.01□□□□□ -1.93
CNTN3Q9P232 RNU6-13P-201ENST00000384248 107 ntBASIC3.01□□□□□ -1.93
CNTN3Q9P232 RNU6-12P-201ENST00000384604 107 ntBASIC3.01□□□□□ -1.93
CNTN3Q9P232 RNU6-41P-201ENST00000384741 107 ntBASIC3.01□□□□□ -1.93
CNTN3Q9P232 MIR29C-201ENST00000385231 88 ntBASIC3.01□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 196.8 ms