Protein–RNA interactions for Protein: Q9NR96

TLR9, Toll-like receptor 9, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR9Q9NR96 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC2.57□□□□□ -2
TLR9Q9NR96 SNORA79-201ENST00000408376 140 ntBASIC2.57□□□□□ -2
TLR9Q9NR96 RNU2-55P-201ENST00000411146 174 ntBASIC2.57□□□□□ -2
TLR9Q9NR96 AC009238.1-201ENST00000442165 424 ntBASIC2.57□□□□□ -2
TLR9Q9NR96 AC009237.6-201ENST00000446969 424 ntBASIC2.57□□□□□ -2
TLR9Q9NR96 AC245102.2-201ENST00000448956 180 ntBASIC2.57□□□□□ -2
TLR9Q9NR96 RPS27P22-201ENST00000478056 241 ntBASIC2.57□□□□□ -2
TLR9Q9NR96 RPPH1-2P-201ENST00000516688 293 ntBASIC2.57□□□□□ -2
TLR9Q9NR96 AL160236.1-201ENST00000556317 195 ntBASIC2.57□□□□□ -2
TLR9Q9NR96 MIR1291-201ENST00000627649 87 ntBASIC2.57□□□□□ -2
TLR9Q9NR96 RNU4-13P-201ENST00000364019 141 ntBASIC2.56□□□□□ -2
TLR9Q9NR96 Y_RNA.294-201ENST00000364916 102 ntBASIC2.56□□□□□ -2
TLR9Q9NR96 Y_RNA.432-201ENST00000384087 111 ntBASIC2.56□□□□□ -2
TLR9Q9NR96 AC060773.1-201ENST00000421698 310 ntBASIC2.56□□□□□ -2
TLR9Q9NR96 RPS12P2-201ENST00000439728 269 ntBASIC2.56□□□□□ -2
TLR9Q9NR96 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.56□□□□□ -2
TLR9Q9NR96 RPS4XP11-201ENST00000446897 772 ntBASIC2.56□□□□□ -2
TLR9Q9NR96 AC097462.1-201ENST00000514125 324 ntBASIC2.56□□□□□ -2
TLR9Q9NR96 MIR4498-201ENST00000577599 66 ntBASIC2.56□□□□□ -2
TLR9Q9NR96 MIR5092-201ENST00000583139 88 ntBASIC2.56□□□□□ -2
TLR9Q9NR96 RNU6-153P-201ENST00000364422 104 ntBASIC2.55□□□□□ -2
TLR9Q9NR96 RNU6-136P-201ENST00000384663 107 ntBASIC2.55□□□□□ -2
TLR9Q9NR96 Y_RNA.584-201ENST00000391090 114 ntBASIC2.55□□□□□ -2
TLR9Q9NR96 AC245047.4-201ENST00000433189 144 ntBASIC2.55□□□□□ -2
TLR9Q9NR96 AC026436.1-201ENST00000510537 270 ntBASIC2.55□□□□□ -2
TLR9Q9NR96 AC090142.3-201ENST00000519012 385 ntBASIC2.55□□□□□ -2
TLR9Q9NR96 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC2.55□□□□□ -2
TLR9Q9NR96 MIR4438-201ENST00000585271 93 ntBASIC2.55□□□□□ -2
TLR9Q9NR96 AC016717.2-201ENST00000609089 5141 ntBASIC2.55□□□□□ -2
TLR9Q9NR96 MIR6873-201ENST00000622788 63 ntBASIC2.55□□□□□ -2
TLR9Q9NR96 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
TLR9Q9NR96 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.54□□□□□ -2
TLR9Q9NR96 Y_RNA.203-201ENST00000364106 102 ntBASIC2.54□□□□□ -2
TLR9Q9NR96 AL158823.1-201ENST00000418441 478 ntBASIC2.54□□□□□ -2
TLR9Q9NR96 AL353689.1-201ENST00000438895 199 ntBASIC2.54□□□□□ -2
TLR9Q9NR96 SNORD11-201ENST00000459124 84 ntBASIC2.54□□□□□ -2
TLR9Q9NR96 RN7SKP179-201ENST00000516126 217 ntBASIC2.54□□□□□ -2
TLR9Q9NR96 SNORD77.4-201ENST00000516158 81 ntBASIC2.54□□□□□ -2
TLR9Q9NR96 RNU6-1299P-201ENST00000516316 100 ntBASIC2.54□□□□□ -2
TLR9Q9NR96 Y_RNA.712-201ENST00000517011 92 ntBASIC2.54□□□□□ -2
TLR9Q9NR96 AC097639.2-201ENST00000603159 172 ntBASIC2.54□□□□□ -2
TLR9Q9NR96 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.54□□□□□ -2
TLR9Q9NR96 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.54□□□□□ -2
TLR9Q9NR96 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
TLR9Q9NR96 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.53□□□□□ -2
TLR9Q9NR96 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
TLR9Q9NR96 U8.1-201ENST00000362843 134 ntBASIC2.53□□□□□ -2
TLR9Q9NR96 Y_RNA.91-201ENST00000363042 107 ntBASIC2.53□□□□□ -2
TLR9Q9NR96 Y_RNA.796-201ENST00000364268 102 ntBASIC2.53□□□□□ -2
TLR9Q9NR96 Y_RNA.280-201ENST00000364765 112 ntBASIC2.53□□□□□ -2
TLR9Q9NR96 Y_RNA.799-201ENST00000364992 102 ntBASIC2.53□□□□□ -2
TLR9Q9NR96 RNU6-1056P-201ENST00000383996 107 ntBASIC2.53□□□□□ -2
TLR9Q9NR96 RNU6-429P-201ENST00000384582 108 ntBASIC2.53□□□□□ -2
TLR9Q9NR96 MIR1253-201ENST00000408273 105 ntBASIC2.53□□□□□ -2
TLR9Q9NR96 MIR1262-201ENST00000408276 93 ntBASIC2.53□□□□□ -2
TLR9Q9NR96 EDDM3CP-201ENST00000415977 425 ntBASIC2.53□□□□□ -2
TLR9Q9NR96 RNU1-131P-201ENST00000458943 161 ntBASIC2.53□□□□□ -2
TLR9Q9NR96 RNU6-1146P-201ENST00000516282 102 ntBASIC2.53□□□□□ -2
TLR9Q9NR96 SNORA31.15-201ENST00000516771 132 ntBASIC2.53□□□□□ -2
TLR9Q9NR96 AC090049.2-201ENST00000550377 109 ntBASIC2.53□□□□□ -2
TLR9Q9NR96 RPL23AP91-201ENST00000569211 455 ntBASIC2.53□□□□□ -2
TLR9Q9NR96 AL353149.1-201ENST00000610667 244 ntBASIC2.53□□□□□ -2
TLR9Q9NR96 uc_338.4-201ENST00000616635 176 ntBASIC2.53□□□□□ -2
TLR9Q9NR96 U6.73-201ENST00000619194 103 ntBASIC2.53□□□□□ -2
TLR9Q9NR96 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.53□□□□□ -2
TLR9Q9NR96 FO624990.1-201ENST00000636373 85 ntBASIC2.53□□□□□ -2
TLR9Q9NR96 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
TLR9Q9NR96 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.53□□□□□ -2.01
TLR9Q9NR96 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.53□□□□□ -2.01
TLR9Q9NR96 snoU2-30.2-201ENST00000362805 70 ntBASIC2.52□□□□□ -2.01
TLR9Q9NR96 SNORA25.7-201ENST00000364375 127 ntBASIC2.52□□□□□ -2.01
TLR9Q9NR96 HMGN2P34-201ENST00000437647 269 ntBASIC2.52□□□□□ -2.01
TLR9Q9NR96 AC011406.1-201ENST00000512440 370 ntBASIC2.52□□□□□ -2.01
TLR9Q9NR96 RNA5SP153-201ENST00000516498 76 ntBASIC2.52□□□□□ -2.01
TLR9Q9NR96 RNU7-172P-201ENST00000517125 64 ntBASIC2.52□□□□□ -2.01
TLR9Q9NR96 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC2.52□□□□□ -2.01
TLR9Q9NR96 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC2.52□□□□□ -2.01
TLR9Q9NR96 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
TLR9Q9NR96 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.51□□□□□ -2.01
TLR9Q9NR96 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.51□□□□□ -2.01
TLR9Q9NR96 MIR6073-201ENST00000352083 89 ntBASIC2.51□□□□□ -2.01
TLR9Q9NR96 RNU6-235P-201ENST00000362644 107 ntBASIC2.51□□□□□ -2.01
TLR9Q9NR96 Y_RNA.634-201ENST00000364811 113 ntBASIC2.51□□□□□ -2.01
TLR9Q9NR96 DEFA7P-201ENST00000382676 285 ntBASIC2.51□□□□□ -2.01
TLR9Q9NR96 MIR562-201ENST00000384894 95 ntBASIC2.51□□□□□ -2.01
TLR9Q9NR96 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
TLR9Q9NR96 RNU6-1064P-201ENST00000410626 104 ntBASIC2.51□□□□□ -2.01
TLR9Q9NR96 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.51□□□□□ -2.01
TLR9Q9NR96 AL049779.4-201ENST00000604500 156 ntBASIC2.51□□□□□ -2.01
TLR9Q9NR96 AL391516.1-201ENST00000554380 2449 ntBASIC2.51□□□□□ -2.01
TLR9Q9NR96 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.5□□□□□ -2.01
TLR9Q9NR96 Y_RNA.120-201ENST00000363304 110 ntBASIC2.5□□□□□ -2.01
TLR9Q9NR96 RNU6-1209P-201ENST00000363655 107 ntBASIC2.5□□□□□ -2.01
TLR9Q9NR96 RNU1-96P-201ENST00000364163 162 ntBASIC2.5□□□□□ -2.01
TLR9Q9NR96 SNORD114-6-201ENST00000364393 72 ntBASIC2.5□□□□□ -2.01
TLR9Q9NR96 RNU6-1080P-201ENST00000383982 107 ntBASIC2.5□□□□□ -2.01
TLR9Q9NR96 RNU1-138P-201ENST00000384093 164 ntBASIC2.5□□□□□ -2.01
TLR9Q9NR96 RNU6-160P-201ENST00000384591 107 ntBASIC2.5□□□□□ -2.01
TLR9Q9NR96 RNU6-1072P-201ENST00000384703 107 ntBASIC2.5□□□□□ -2.01
TLR9Q9NR96 RNU6-443P-201ENST00000384780 107 ntBASIC2.5□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 128.7 ms