Protein–RNA interactions for Protein: Q9NQV7

PRDM9, Histone-lysine N-methyltransferase PRDM9, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9Q9NQV7 ELOCP29-201ENST00000588193 334 ntBASIC3.49□□□□□ -1.85
PRDM9Q9NQV7 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.49□□□□□ -1.85
PRDM9Q9NQV7 AL356274.2-201ENST00000624379 3752 ntBASIC3.49□□□□□ -1.85
PRDM9Q9NQV7 PWAR6-201ENST00000552334 4618 ntBASIC3.48□□□□□ -1.85
PRDM9Q9NQV7 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
PRDM9Q9NQV7 SNORA62.3-201ENST00000365110 153 ntBASIC3.48□□□□□ -1.85
PRDM9Q9NQV7 Y_RNA.494-201ENST00000384432 111 ntBASIC3.48□□□□□ -1.85
PRDM9Q9NQV7 MIR23B-201ENST00000384832 97 ntBASIC3.48□□□□□ -1.85
PRDM9Q9NQV7 RNU6ATAC41P-201ENST00000408600 126 ntBASIC3.48□□□□□ -1.85
PRDM9Q9NQV7 RNU7-53P-201ENST00000516705 60 ntBASIC3.48□□□□□ -1.85
PRDM9Q9NQV7 MIR376B-201ENST00000614515 100 ntBASIC3.48□□□□□ -1.85
PRDM9Q9NQV7 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
PRDM9Q9NQV7 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
PRDM9Q9NQV7 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
PRDM9Q9NQV7 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
PRDM9Q9NQV7 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC3.47□□□□□ -1.85
PRDM9Q9NQV7 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
PRDM9Q9NQV7 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
PRDM9Q9NQV7 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.47□□□□□ -1.85
PRDM9Q9NQV7 MIRLET7C-201ENST00000362160 84 ntBASIC3.47□□□□□ -1.85
PRDM9Q9NQV7 RNU6-862P-201ENST00000362804 105 ntBASIC3.47□□□□□ -1.85
PRDM9Q9NQV7 AL035423.1-201ENST00000420331 213 ntBASIC3.47□□□□□ -1.85
PRDM9Q9NQV7 AC015922.2-201ENST00000435593 184 ntBASIC3.47□□□□□ -1.85
PRDM9Q9NQV7 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.47□□□□□ -1.85
PRDM9Q9NQV7 AC069257.2-201ENST00000441819 155 ntBASIC3.47□□□□□ -1.85
PRDM9Q9NQV7 AL606517.2-201ENST00000442855 241 ntBASIC3.47□□□□□ -1.85
PRDM9Q9NQV7 STAG3L5P-204ENST00000443759 179 ntBASIC3.47□□□□□ -1.85
PRDM9Q9NQV7 SNORA84-201ENST00000459229 133 ntBASIC3.47□□□□□ -1.85
PRDM9Q9NQV7 DNAJC19P9-201ENST00000555084 351 ntBASIC3.47□□□□□ -1.85
PRDM9Q9NQV7 MIR8058-201ENST00000615737 89 ntBASIC3.47□□□□□ -1.85
PRDM9Q9NQV7 XIST_intron.1-201ENST00000619444 68 ntBASIC3.47□□□□□ -1.85
PRDM9Q9NQV7 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC3.47□□□□□ -1.85
PRDM9Q9NQV7 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
PRDM9Q9NQV7 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
PRDM9Q9NQV7 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
PRDM9Q9NQV7 RNA5SP124-201ENST00000362739 110 ntBASIC3.46□□□□□ -1.86
PRDM9Q9NQV7 Y_RNA.94-201ENST00000363068 106 ntBASIC3.46□□□□□ -1.86
PRDM9Q9NQV7 Y_RNA.140-201ENST00000363474 103 ntBASIC3.46□□□□□ -1.86
PRDM9Q9NQV7 Y_RNA.191-201ENST00000363972 113 ntBASIC3.46□□□□□ -1.86
PRDM9Q9NQV7 AL445685.2-201ENST00000422551 342 ntBASIC3.46□□□□□ -1.86
PRDM9Q9NQV7 SNORD105B-201ENST00000458770 79 ntBASIC3.46□□□□□ -1.86
PRDM9Q9NQV7 RNU1-95P-201ENST00000516357 160 ntBASIC3.46□□□□□ -1.86
PRDM9Q9NQV7 RNU1-128P-201ENST00000516704 160 ntBASIC3.46□□□□□ -1.86
PRDM9Q9NQV7 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.46□□□□□ -1.86
PRDM9Q9NQV7 AC103810.7-201ENST00000607821 91 ntBASIC3.46□□□□□ -1.86
PRDM9Q9NQV7 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.46□□□□□ -1.86
PRDM9Q9NQV7 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
PRDM9Q9NQV7 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
PRDM9Q9NQV7 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
PRDM9Q9NQV7 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
PRDM9Q9NQV7 SNORD38.1-201ENST00000363863 68 ntBASIC3.45□□□□□ -1.86
PRDM9Q9NQV7 RNU7-45P-201ENST00000459460 63 ntBASIC3.45□□□□□ -1.86
PRDM9Q9NQV7 IGHVIII-5-1-201ENST00000523059 99 ntBASIC3.45□□□□□ -1.86
PRDM9Q9NQV7 AC008011.1-201ENST00000545989 227 ntBASIC3.45□□□□□ -1.86
PRDM9Q9NQV7 MIR92B-201ENST00000607575 96 ntBASIC3.45□□□□□ -1.86
PRDM9Q9NQV7 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
PRDM9Q9NQV7 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
PRDM9Q9NQV7 Z83843.1-201ENST00000604070 3685 ntBASIC3.44□□□□□ -1.86
PRDM9Q9NQV7 RNA5SP51-201ENST00000364750 119 ntBASIC3.44□□□□□ -1.86
PRDM9Q9NQV7 AL359837.1-201ENST00000381357 287 ntBASIC3.44□□□□□ -1.86
PRDM9Q9NQV7 SNORA5A-201ENST00000384111 134 ntBASIC3.44□□□□□ -1.86
PRDM9Q9NQV7 MIR200C-201ENST00000384980 68 ntBASIC3.44□□□□□ -1.86
PRDM9Q9NQV7 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
PRDM9Q9NQV7 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
PRDM9Q9NQV7 SNORA26.6-201ENST00000391256 115 ntBASIC3.44□□□□□ -1.86
PRDM9Q9NQV7 SNORA11.4-201ENST00000408823 129 ntBASIC3.44□□□□□ -1.86
PRDM9Q9NQV7 ATP5A1P2-201ENST00000412323 255 ntBASIC3.44□□□□□ -1.86
PRDM9Q9NQV7 RNU7-181P-201ENST00000517234 74 ntBASIC3.44□□□□□ -1.86
PRDM9Q9NQV7 MIR3158-1-201ENST00000583596 81 ntBASIC3.44□□□□□ -1.86
PRDM9Q9NQV7 MIR4712-201ENST00000583750 82 ntBASIC3.44□□□□□ -1.86
PRDM9Q9NQV7 AC005000.2-201ENST00000605468 310 ntBASIC3.44□□□□□ -1.86
PRDM9Q9NQV7 AC103810.6-201ENST00000606708 136 ntBASIC3.44□□□□□ -1.86
PRDM9Q9NQV7 MIR8054-201ENST00000620877 86 ntBASIC3.44□□□□□ -1.86
PRDM9Q9NQV7 AP003355.3-201ENST00000623465 114 ntBASIC3.44□□□□□ -1.86
PRDM9Q9NQV7 SNORD3E-202ENST00000627253 216 ntBASIC3.44□□□□□ -1.86
PRDM9Q9NQV7 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
PRDM9Q9NQV7 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.44□□□□□ -1.86
PRDM9Q9NQV7 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.44□□□□□ -1.86
PRDM9Q9NQV7 AL021368.2-201ENST00000606125 5352 ntBASIC3.43□□□□□ -1.86
PRDM9Q9NQV7 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.43□□□□□ -1.86
PRDM9Q9NQV7 ICE2P2-201ENST00000483823 2787 ntBASIC3.43□□□□□ -1.86
PRDM9Q9NQV7 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.43□□□□□ -1.86
PRDM9Q9NQV7 RNU6-833P-201ENST00000363486 107 ntBASIC3.43□□□□□ -1.86
PRDM9Q9NQV7 RNA5SP42-201ENST00000364278 115 ntBASIC3.43□□□□□ -1.86
PRDM9Q9NQV7 RNU6-283P-201ENST00000364788 107 ntBASIC3.43□□□□□ -1.86
PRDM9Q9NQV7 SNORA25B-201ENST00000365507 128 ntBASIC3.43□□□□□ -1.86
PRDM9Q9NQV7 SNORA24-201ENST00000384096 131 ntBASIC3.43□□□□□ -1.86
PRDM9Q9NQV7 AC003685.2-201ENST00000422795 395 ntBASIC3.43□□□□□ -1.86
PRDM9Q9NQV7 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC3.43□□□□□ -1.86
PRDM9Q9NQV7 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC3.43□□□□□ -1.86
PRDM9Q9NQV7 SNORA67.7-201ENST00000516664 135 ntBASIC3.43□□□□□ -1.86
PRDM9Q9NQV7 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
PRDM9Q9NQV7 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
PRDM9Q9NQV7 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
PRDM9Q9NQV7 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
PRDM9Q9NQV7 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.42□□□□□ -1.86
PRDM9Q9NQV7 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.42□□□□□ -1.86
PRDM9Q9NQV7 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC3.42□□□□□ -1.86
PRDM9Q9NQV7 RNU6-1163P-201ENST00000364516 107 ntBASIC3.42□□□□□ -1.86
PRDM9Q9NQV7 RNU6-1072P-201ENST00000384703 107 ntBASIC3.42□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 188.3 ms