Protein–RNA interactions for Protein: Q9HBJ7

USP29, Ubiquitin carboxyl-terminal hydrolase 29, humanhuman

Predictions only

Length 922 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP29Q9HBJ7 RPL23AP54-201ENST00000495129 419 ntBASIC2.04□□□□□ -2.08
USP29Q9HBJ7 AC107393.1-201ENST00000512403 346 ntBASIC2.04□□□□□ -2.08
USP29Q9HBJ7 RNU6-182P-201ENST00000516970 105 ntBASIC2.04□□□□□ -2.08
USP29Q9HBJ7 AC011604.1-201ENST00000545978 196 ntBASIC2.04□□□□□ -2.08
USP29Q9HBJ7 SUB1P4-201ENST00000566062 339 ntBASIC2.04□□□□□ -2.08
USP29Q9HBJ7 MIR5094-201ENST00000578766 85 ntBASIC2.04□□□□□ -2.08
USP29Q9HBJ7 SNRPGP19-201ENST00000603826 189 ntBASIC2.04□□□□□ -2.08
USP29Q9HBJ7 FTX_2.1-201ENST00000618816 94 ntBASIC2.04□□□□□ -2.08
USP29Q9HBJ7 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
USP29Q9HBJ7 RNU6-1019P-201ENST00000364424 107 ntBASIC2.03□□□□□ -2.08
USP29Q9HBJ7 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
USP29Q9HBJ7 AL512604.1-201ENST00000404812 257 ntBASIC2.03□□□□□ -2.08
USP29Q9HBJ7 MIR548I3-201ENST00000408378 149 ntBASIC2.03□□□□□ -2.08
USP29Q9HBJ7 MIR548I1-201ENST00000408810 149 ntBASIC2.03□□□□□ -2.08
USP29Q9HBJ7 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC2.03□□□□□ -2.08
USP29Q9HBJ7 RPS27P21-201ENST00000486977 252 ntBASIC2.03□□□□□ -2.08
USP29Q9HBJ7 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC2.03□□□□□ -2.08
USP29Q9HBJ7 AC022559.1-201ENST00000520905 205 ntBASIC2.03□□□□□ -2.08
USP29Q9HBJ7 AC069114.2-201ENST00000604699 304 ntBASIC2.03□□□□□ -2.08
USP29Q9HBJ7 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC2.03□□□□□ -2.08
USP29Q9HBJ7 Y_RNA.24-201ENST00000362508 103 ntBASIC2.02□□□□□ -2.09
USP29Q9HBJ7 RNU6-1020P-201ENST00000363684 107 ntBASIC2.02□□□□□ -2.09
USP29Q9HBJ7 Y_RNA.338-201ENST00000365320 114 ntBASIC2.02□□□□□ -2.09
USP29Q9HBJ7 RNU4-17P-201ENST00000365598 141 ntBASIC2.02□□□□□ -2.09
USP29Q9HBJ7 RNU6-969P-201ENST00000383900 105 ntBASIC2.02□□□□□ -2.09
USP29Q9HBJ7 RNU2-40P-201ENST00000410833 196 ntBASIC2.02□□□□□ -2.09
USP29Q9HBJ7 AL158823.1-201ENST00000418441 478 ntBASIC2.02□□□□□ -2.09
USP29Q9HBJ7 PIGPP3-201ENST00000425307 415 ntBASIC2.02□□□□□ -2.09
USP29Q9HBJ7 SCARNA8-201ENST00000515924 131 ntBASIC2.02□□□□□ -2.09
USP29Q9HBJ7 RNU6-1291P-201ENST00000516591 104 ntBASIC2.02□□□□□ -2.09
USP29Q9HBJ7 AP002392.1-201ENST00000537692 208 ntBASIC2.02□□□□□ -2.09
USP29Q9HBJ7 MIR4724-201ENST00000579485 89 ntBASIC2.02□□□□□ -2.09
USP29Q9HBJ7 AC098479.1-201ENST00000609225 154 ntBASIC2.02□□□□□ -2.09
USP29Q9HBJ7 AC245060.5-201ENST00000610778 3293 ntBASIC2.02□□□□□ -2.09
USP29Q9HBJ7 RNU6-682P-201ENST00000363843 106 ntBASIC2.01□□□□□ -2.09
USP29Q9HBJ7 SNORA63D-201ENST00000364359 132 ntBASIC2.01□□□□□ -2.09
USP29Q9HBJ7 Y_RNA.233-201ENST00000364407 101 ntBASIC2.01□□□□□ -2.09
USP29Q9HBJ7 MIR583-201ENST00000384846 75 ntBASIC2.01□□□□□ -2.09
USP29Q9HBJ7 RNU11-5P-201ENST00000391216 129 ntBASIC2.01□□□□□ -2.09
USP29Q9HBJ7 SUMO2P12-201ENST00000405924 140 ntBASIC2.01□□□□□ -2.09
USP29Q9HBJ7 RNU7-94P-201ENST00000459576 63 ntBASIC2.01□□□□□ -2.09
USP29Q9HBJ7 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.01□□□□□ -2.09
USP29Q9HBJ7 AL358944.1-201ENST00000528537 144 ntBASIC2.01□□□□□ -2.09
USP29Q9HBJ7 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC2.01□□□□□ -2.09
USP29Q9HBJ7 AC072026.1-201ENST00000605023 201 ntBASIC2.01□□□□□ -2.09
USP29Q9HBJ7 AL021707.8-201ENST00000609428 183 ntBASIC2.01□□□□□ -2.09
USP29Q9HBJ7 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
USP29Q9HBJ7 ZNF702P-202ENST00000434269 1966 ntBASIC2.01□□□□□ -2.09
USP29Q9HBJ7 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.01□□□□□ -2.09
USP29Q9HBJ7 SNORA1B-201ENST00000362535 133 ntBASIC2□□□□□ -2.09
USP29Q9HBJ7 Y_RNA.140-201ENST00000363474 103 ntBASIC2□□□□□ -2.09
USP29Q9HBJ7 Y_RNA.203-201ENST00000364106 102 ntBASIC2□□□□□ -2.09
USP29Q9HBJ7 Y_RNA.229-201ENST00000364347 113 ntBASIC2□□□□□ -2.09
USP29Q9HBJ7 Y_RNA.267-201ENST00000364679 109 ntBASIC2□□□□□ -2.09
USP29Q9HBJ7 RNU6-1080P-201ENST00000383982 107 ntBASIC2□□□□□ -2.09
USP29Q9HBJ7 Y_RNA.571-201ENST00000384753 98 ntBASIC2□□□□□ -2.09
USP29Q9HBJ7 MIR17-201ENST00000385012 84 ntBASIC2□□□□□ -2.09
USP29Q9HBJ7 RNA5SP109-201ENST00000391010 116 ntBASIC2□□□□□ -2.09
USP29Q9HBJ7 PCNPP3-201ENST00000393579 471 ntBASIC2□□□□□ -2.09
USP29Q9HBJ7 RNA5SP247-201ENST00000411181 105 ntBASIC2□□□□□ -2.09
USP29Q9HBJ7 RN7SL274P-201ENST00000492268 272 ntBASIC2□□□□□ -2.09
USP29Q9HBJ7 RNU6-453P-201ENST00000516819 85 ntBASIC2□□□□□ -2.09
USP29Q9HBJ7 AC012493.3-201ENST00000604494 112 ntBASIC2□□□□□ -2.09
USP29Q9HBJ7 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC2□□□□□ -2.09
USP29Q9HBJ7 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
USP29Q9HBJ7 MIR367-201ENST00000362299 68 ntBASIC1.99□□□□□ -2.09
USP29Q9HBJ7 Y_RNA.7-201ENST00000362352 102 ntBASIC1.99□□□□□ -2.09
USP29Q9HBJ7 RNU6-112P-201ENST00000363599 104 ntBASIC1.99□□□□□ -2.09
USP29Q9HBJ7 Y_RNA.796-201ENST00000364268 102 ntBASIC1.99□□□□□ -2.09
USP29Q9HBJ7 Y_RNA.238-201ENST00000364441 102 ntBASIC1.99□□□□□ -2.09
USP29Q9HBJ7 Y_RNA.799-201ENST00000364992 102 ntBASIC1.99□□□□□ -2.09
USP29Q9HBJ7 RNU6-296P-201ENST00000384608 107 ntBASIC1.99□□□□□ -2.09
USP29Q9HBJ7 RNA5SP212-201ENST00000391223 107 ntBASIC1.99□□□□□ -2.09
USP29Q9HBJ7 RN7SKP101-201ENST00000411376 320 ntBASIC1.99□□□□□ -2.09
USP29Q9HBJ7 AL356379.1-201ENST00000414105 126 ntBASIC1.99□□□□□ -2.09
USP29Q9HBJ7 RNA5SP233-201ENST00000459153 113 ntBASIC1.99□□□□□ -2.09
USP29Q9HBJ7 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.99□□□□□ -2.09
USP29Q9HBJ7 AL359851.1-201ENST00000569460 4997 ntBASIC1.99□□□□□ -2.09
USP29Q9HBJ7 Y_RNA.121-201ENST00000363309 113 ntBASIC1.98□□□□□ -2.09
USP29Q9HBJ7 Y_RNA.555-201ENST00000384673 110 ntBASIC1.98□□□□□ -2.09
USP29Q9HBJ7 MIR562-201ENST00000384894 95 ntBASIC1.98□□□□□ -2.09
USP29Q9HBJ7 MIR616-201ENST00000385293 97 ntBASIC1.98□□□□□ -2.09
USP29Q9HBJ7 AC233266.1-201ENST00000454518 96 ntBASIC1.98□□□□□ -2.09
USP29Q9HBJ7 RN7SKP164-201ENST00000516138 266 ntBASIC1.98□□□□□ -2.09
USP29Q9HBJ7 RNU6-1219P-201ENST00000516143 112 ntBASIC1.98□□□□□ -2.09
USP29Q9HBJ7 SNORA31.10-201ENST00000516482 106 ntBASIC1.98□□□□□ -2.09
USP29Q9HBJ7 RNU6-861P-201ENST00000516745 106 ntBASIC1.98□□□□□ -2.09
USP29Q9HBJ7 RNU2-4P-201ENST00000606190 192 ntBASIC1.98□□□□□ -2.09
USP29Q9HBJ7 AC242852.1-201ENST00000612151 96 ntBASIC1.98□□□□□ -2.09
USP29Q9HBJ7 AL773524.1-201ENST00000614065 229 ntBASIC1.98□□□□□ -2.09
USP29Q9HBJ7 AC244015.1-201ENST00000622301 99 ntBASIC1.98□□□□□ -2.09
USP29Q9HBJ7 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.98□□□□□ -2.09
USP29Q9HBJ7 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.97□□□□□ -2.09
USP29Q9HBJ7 Y_RNA.150-201ENST00000363562 102 ntBASIC1.97□□□□□ -2.09
USP29Q9HBJ7 RNU6-1209P-201ENST00000363655 107 ntBASIC1.97□□□□□ -2.09
USP29Q9HBJ7 Y_RNA.240-201ENST00000364469 95 ntBASIC1.97□□□□□ -2.09
USP29Q9HBJ7 RNU6-886P-201ENST00000384319 105 ntBASIC1.97□□□□□ -2.09
USP29Q9HBJ7 MT-TT-201ENST00000387460 66 ntBASIC1.97□□□□□ -2.09
USP29Q9HBJ7 SNORA12.1-201ENST00000390873 148 ntBASIC1.97□□□□□ -2.09
USP29Q9HBJ7 RNA5SP496-201ENST00000391240 109 ntBASIC1.97□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 11.3 ms