Protein–RNA interactions for Protein: Q9BU40

CHRDL1, Chordin-like protein 1, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL1Q9BU40 U8.1-201ENST00000362843 134 ntBASIC1.09□□□□□ -2.23
CHRDL1Q9BU40 RNU6-324P-201ENST00000363957 106 ntBASIC1.09□□□□□ -2.23
CHRDL1Q9BU40 SNORD115-30-201ENST00000364117 82 ntBASIC1.09□□□□□ -2.23
CHRDL1Q9BU40 Y_RNA.267-201ENST00000364679 109 ntBASIC1.09□□□□□ -2.23
CHRDL1Q9BU40 Y_RNA.288-201ENST00000364854 92 ntBASIC1.09□□□□□ -2.23
CHRDL1Q9BU40 RNU6-1310P-201ENST00000384153 107 ntBASIC1.09□□□□□ -2.23
CHRDL1Q9BU40 SNORA70.7-201ENST00000384159 133 ntBASIC1.09□□□□□ -2.23
CHRDL1Q9BU40 Y_RNA.581-201ENST00000391017 97 ntBASIC1.09□□□□□ -2.23
CHRDL1Q9BU40 MIR873-201ENST00000401120 77 ntBASIC1.09□□□□□ -2.23
CHRDL1Q9BU40 MIR1302-6-201ENST00000408466 90 ntBASIC1.09□□□□□ -2.23
CHRDL1Q9BU40 PGBD4P5-201ENST00000445958 426 ntBASIC1.09□□□□□ -2.23
CHRDL1Q9BU40 AC091021.1-201ENST00000468051 388 ntBASIC1.09□□□□□ -2.23
CHRDL1Q9BU40 TRBVB-201ENST00000477100 408 ntBASIC1.09□□□□□ -2.23
CHRDL1Q9BU40 AL133373.1-201ENST00000497098 94 ntBASIC1.09□□□□□ -2.23
CHRDL1Q9BU40 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.09□□□□□ -2.23
CHRDL1Q9BU40 RNU6-1291P-201ENST00000516591 104 ntBASIC1.09□□□□□ -2.23
CHRDL1Q9BU40 MIR3664-201ENST00000579074 99 ntBASIC1.09□□□□□ -2.23
CHRDL1Q9BU40 RPS29P30-201ENST00000600975 111 ntBASIC1.09□□□□□ -2.23
CHRDL1Q9BU40 AC006380.1-201ENST00000603598 186 ntBASIC1.09□□□□□ -2.23
CHRDL1Q9BU40 MIR8054-201ENST00000620877 86 ntBASIC1.09□□□□□ -2.23
CHRDL1Q9BU40 AC127459.3-201ENST00000624328 466 ntBASIC1.09□□□□□ -2.23
CHRDL1Q9BU40 AC006435.5-201ENST00000624486 112 ntBASIC1.09□□□□□ -2.23
CHRDL1Q9BU40 AC018630.2-201ENST00000534866 2403 ntBASIC1.09□□□□□ -2.24
CHRDL1Q9BU40 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.09□□□□□ -2.24
CHRDL1Q9BU40 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
CHRDL1Q9BU40 MIR335-201ENST00000362173 94 ntBASIC1.08□□□□□ -2.24
CHRDL1Q9BU40 SNORD81.1-201ENST00000363064 77 ntBASIC1.08□□□□□ -2.24
CHRDL1Q9BU40 Y_RNA.243-201ENST00000364481 109 ntBASIC1.08□□□□□ -2.24
CHRDL1Q9BU40 Y_RNA.446-201ENST00000384178 104 ntBASIC1.08□□□□□ -2.24
CHRDL1Q9BU40 SNORD63-201ENST00000384262 68 ntBASIC1.08□□□□□ -2.24
CHRDL1Q9BU40 Y_RNA.526-201ENST00000384572 110 ntBASIC1.08□□□□□ -2.24
CHRDL1Q9BU40 RNU6-440P-201ENST00000390882 105 ntBASIC1.08□□□□□ -2.24
CHRDL1Q9BU40 AL031003.1-201ENST00000404229 172 ntBASIC1.08□□□□□ -2.24
CHRDL1Q9BU40 AL603910.2-201ENST00000407268 136 ntBASIC1.08□□□□□ -2.24
CHRDL1Q9BU40 RNU6-651P-201ENST00000411040 105 ntBASIC1.08□□□□□ -2.24
CHRDL1Q9BU40 RNU6-1199P-201ENST00000411249 104 ntBASIC1.08□□□□□ -2.24
CHRDL1Q9BU40 STAG3L5P-204ENST00000443759 179 ntBASIC1.08□□□□□ -2.24
CHRDL1Q9BU40 RNU7-95P-201ENST00000459222 64 ntBASIC1.08□□□□□ -2.24
CHRDL1Q9BU40 RNU6-1338P-201ENST00000516328 91 ntBASIC1.08□□□□□ -2.24
CHRDL1Q9BU40 RPL21P9-201ENST00000556149 474 ntBASIC1.08□□□□□ -2.24
CHRDL1Q9BU40 AC011921.3-201ENST00000605540 361 ntBASIC1.08□□□□□ -2.24
CHRDL1Q9BU40 AC005828.6-201ENST00000606610 232 ntBASIC1.08□□□□□ -2.24
CHRDL1Q9BU40 AL512598.1-201ENST00000610158 273 ntBASIC1.08□□□□□ -2.24
CHRDL1Q9BU40 AC021506.2-201ENST00000612354 169 ntBASIC1.08□□□□□ -2.24
CHRDL1Q9BU40 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.08□□□□□ -2.24
CHRDL1Q9BU40 AC141273.2-201ENST00000618989 130 ntBASIC1.08□□□□□ -2.24
CHRDL1Q9BU40 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.08□□□□□ -2.24
CHRDL1Q9BU40 MIR6079-201ENST00000635807 62 ntBASIC1.08□□□□□ -2.24
CHRDL1Q9BU40 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC1.07□□□□□ -2.24
CHRDL1Q9BU40 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
CHRDL1Q9BU40 Y_RNA.76-201ENST00000362931 109 ntBASIC1.07□□□□□ -2.24
CHRDL1Q9BU40 RNY1-201ENST00000364228 113 ntBASIC1.07□□□□□ -2.24
CHRDL1Q9BU40 RNU6-1175P-201ENST00000365200 107 ntBASIC1.07□□□□□ -2.24
CHRDL1Q9BU40 Y_RNA.416-201ENST00000384014 113 ntBASIC1.07□□□□□ -2.24
CHRDL1Q9BU40 Y_RNA.439-201ENST00000384119 94 ntBASIC1.07□□□□□ -2.24
CHRDL1Q9BU40 RNU6-713P-201ENST00000384761 107 ntBASIC1.07□□□□□ -2.24
CHRDL1Q9BU40 RNU6-1031P-201ENST00000384773 107 ntBASIC1.07□□□□□ -2.24
CHRDL1Q9BU40 SNORA12.1-201ENST00000390873 148 ntBASIC1.07□□□□□ -2.24
CHRDL1Q9BU40 RNU2-54P-201ENST00000410299 190 ntBASIC1.07□□□□□ -2.24
CHRDL1Q9BU40 RNU6-847P-201ENST00000411115 108 ntBASIC1.07□□□□□ -2.24
CHRDL1Q9BU40 AP1B1P2-201ENST00000416196 106 ntBASIC1.07□□□□□ -2.24
CHRDL1Q9BU40 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.07□□□□□ -2.24
CHRDL1Q9BU40 RPL39P38-201ENST00000467018 153 ntBASIC1.07□□□□□ -2.24
CHRDL1Q9BU40 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC1.07□□□□□ -2.24
CHRDL1Q9BU40 RNU6-1278P-201ENST00000516130 107 ntBASIC1.07□□□□□ -2.24
CHRDL1Q9BU40 SNORA40.15-201ENST00000516884 107 ntBASIC1.07□□□□□ -2.24
CHRDL1Q9BU40 Y_RNA.713-201ENST00000517013 96 ntBASIC1.07□□□□□ -2.24
CHRDL1Q9BU40 DEFB108E-201ENST00000524692 240 ntBASIC1.07□□□□□ -2.24
CHRDL1Q9BU40 AC009779.6-201ENST00000603972 165 ntBASIC1.07□□□□□ -2.24
CHRDL1Q9BU40 MIR376A1-201ENST00000616574 68 ntBASIC1.07□□□□□ -2.24
CHRDL1Q9BU40 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC1.07□□□□□ -2.24
CHRDL1Q9BU40 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
CHRDL1Q9BU40 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.06□□□□□ -2.24
CHRDL1Q9BU40 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
CHRDL1Q9BU40 AC068700.1-201ENST00000565862 3754 ntBASIC1.06□□□□□ -2.24
CHRDL1Q9BU40 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC1.06□□□□□ -2.24
CHRDL1Q9BU40 SNORD113-8-201ENST00000363497 74 ntBASIC1.06□□□□□ -2.24
CHRDL1Q9BU40 Y_RNA.164-201ENST00000363709 102 ntBASIC1.06□□□□□ -2.24
CHRDL1Q9BU40 Y_RNA.172-201ENST00000363765 102 ntBASIC1.06□□□□□ -2.24
CHRDL1Q9BU40 Y_RNA.269-201ENST00000364685 89 ntBASIC1.06□□□□□ -2.24
CHRDL1Q9BU40 Y_RNA.274-201ENST00000364714 101 ntBASIC1.06□□□□□ -2.24
CHRDL1Q9BU40 Y_RNA.277-201ENST00000364754 102 ntBASIC1.06□□□□□ -2.24
CHRDL1Q9BU40 Y_RNA.462-201ENST00000384268 102 ntBASIC1.06□□□□□ -2.24
CHRDL1Q9BU40 SNORD116-13-201ENST00000384408 92 ntBASIC1.06□□□□□ -2.24
CHRDL1Q9BU40 Y_RNA.570-201ENST00000384750 101 ntBASIC1.06□□□□□ -2.24
CHRDL1Q9BU40 RNU4-30P-201ENST00000410245 143 ntBASIC1.06□□□□□ -2.24
CHRDL1Q9BU40 Y_RNA.602-201ENST00000410535 92 ntBASIC1.06□□□□□ -2.24
CHRDL1Q9BU40 Z98949.2-201ENST00000440996 144 ntBASIC1.06□□□□□ -2.24
CHRDL1Q9BU40 AC233266.1-201ENST00000454518 96 ntBASIC1.06□□□□□ -2.24
CHRDL1Q9BU40 OR2A41P-201ENST00000473586 105 ntBASIC1.06□□□□□ -2.24
CHRDL1Q9BU40 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.06□□□□□ -2.24
CHRDL1Q9BU40 RNU6-138P-201ENST00000515952 107 ntBASIC1.06□□□□□ -2.24
CHRDL1Q9BU40 RNU6-1337P-201ENST00000516525 95 ntBASIC1.06□□□□□ -2.24
CHRDL1Q9BU40 RNU2-56P-201ENST00000516826 190 ntBASIC1.06□□□□□ -2.24
CHRDL1Q9BU40 RNA5SP404-201ENST00000517118 132 ntBASIC1.06□□□□□ -2.24
CHRDL1Q9BU40 AC130289.1-201ENST00000577321 73 ntBASIC1.06□□□□□ -2.24
CHRDL1Q9BU40 MIR3684-201ENST00000579779 74 ntBASIC1.06□□□□□ -2.24
CHRDL1Q9BU40 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC1.06□□□□□ -2.24
CHRDL1Q9BU40 AC242852.1-201ENST00000612151 96 ntBASIC1.06□□□□□ -2.24
CHRDL1Q9BU40 5S_rRNA.13-201ENST00000622298 123 ntBASIC1.06□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 213.2 ms