Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC3.67□□□□□ -1.82
PHOX2BQ99453 AC245060.5-201ENST00000610778 3293 ntBASIC3.67□□□□□ -1.82
PHOX2BQ99453 AC092435.3-201ENST00000565538 3654 ntBASIC3.66□□□□□ -1.82
PHOX2BQ99453 FAM35CP-201ENST00000554755 2470 ntBASIC3.66□□□□□ -1.82
PHOX2BQ99453 RNU6-363P-201ENST00000362895 105 ntBASIC3.66□□□□□ -1.82
PHOX2BQ99453 RNU6-1019P-201ENST00000364424 107 ntBASIC3.66□□□□□ -1.82
PHOX2BQ99453 RNU4-16P-201ENST00000364737 141 ntBASIC3.66□□□□□ -1.82
PHOX2BQ99453 SNORA4.2-201ENST00000365313 147 ntBASIC3.66□□□□□ -1.82
PHOX2BQ99453 RNU6-409P-201ENST00000384114 104 ntBASIC3.66□□□□□ -1.82
PHOX2BQ99453 SNORA70.7-201ENST00000384159 133 ntBASIC3.66□□□□□ -1.82
PHOX2BQ99453 SNORA44-201ENST00000384584 132 ntBASIC3.66□□□□□ -1.82
PHOX2BQ99453 AC096949.1-201ENST00000412047 152 ntBASIC3.66□□□□□ -1.82
PHOX2BQ99453 MIR3152-201ENST00000579801 74 ntBASIC3.66□□□□□ -1.82
PHOX2BQ99453 ZNF861P-201ENST00000588126 639 ntBASIC3.66□□□□□ -1.82
PHOX2BQ99453 AC069114.2-201ENST00000604699 304 ntBASIC3.66□□□□□ -1.82
PHOX2BQ99453 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
PHOX2BQ99453 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
PHOX2BQ99453 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.66□□□□□ -1.82
PHOX2BQ99453 SNORA54-201ENST00000384281 123 ntBASIC3.65□□□□□ -1.83
PHOX2BQ99453 RNU6-1152P-201ENST00000384576 107 ntBASIC3.65□□□□□ -1.83
PHOX2BQ99453 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
PHOX2BQ99453 RNU6-1275P-201ENST00000391087 107 ntBASIC3.65□□□□□ -1.83
PHOX2BQ99453 MIR1267-201ENST00000408723 78 ntBASIC3.65□□□□□ -1.83
PHOX2BQ99453 RNA5SP261-201ENST00000410536 106 ntBASIC3.65□□□□□ -1.83
PHOX2BQ99453 RNU6-733P-201ENST00000410759 104 ntBASIC3.65□□□□□ -1.83
PHOX2BQ99453 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC3.65□□□□□ -1.83
PHOX2BQ99453 SNORA70.19-201ENST00000516717 90 ntBASIC3.65□□□□□ -1.83
PHOX2BQ99453 AC004812.1-201ENST00000540773 146 ntBASIC3.65□□□□□ -1.83
PHOX2BQ99453 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
PHOX2BQ99453 MIR4276-201ENST00000584832 70 ntBASIC3.65□□□□□ -1.83
PHOX2BQ99453 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
PHOX2BQ99453 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.65□□□□□ -1.83
PHOX2BQ99453 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
PHOX2BQ99453 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
PHOX2BQ99453 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
PHOX2BQ99453 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.64□□□□□ -1.83
PHOX2BQ99453 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
PHOX2BQ99453 Y_RNA.155-201ENST00000363632 101 ntBASIC3.64□□□□□ -1.83
PHOX2BQ99453 SNORA25.6-201ENST00000364121 118 ntBASIC3.64□□□□□ -1.83
PHOX2BQ99453 SNORD17-201ENST00000390930 237 ntBASIC3.64□□□□□ -1.83
PHOX2BQ99453 AL034345.1-201ENST00000407768 123 ntBASIC3.64□□□□□ -1.83
PHOX2BQ99453 AC015922.2-201ENST00000435593 184 ntBASIC3.64□□□□□ -1.83
PHOX2BQ99453 RPL23AP67-201ENST00000465341 474 ntBASIC3.64□□□□□ -1.83
PHOX2BQ99453 MIR5004-201ENST00000579078 107 ntBASIC3.64□□□□□ -1.83
PHOX2BQ99453 AC002984.1-201ENST00000591692 448 ntBASIC3.64□□□□□ -1.83
PHOX2BQ99453 AC087741.2-201ENST00000619415 172 ntBASIC3.64□□□□□ -1.83
PHOX2BQ99453 MIR7843-201ENST00000622274 79 ntBASIC3.64□□□□□ -1.83
PHOX2BQ99453 AL442644.1-201ENST00000454390 3105 ntBASIC3.64□□□□□ -1.83
PHOX2BQ99453 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.64□□□□□ -1.83
PHOX2BQ99453 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.64□□□□□ -1.83
PHOX2BQ99453 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.63□□□□□ -1.83
PHOX2BQ99453 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
PHOX2BQ99453 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
PHOX2BQ99453 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.63□□□□□ -1.83
PHOX2BQ99453 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
PHOX2BQ99453 RNA5SP109-201ENST00000391010 116 ntBASIC3.63□□□□□ -1.83
PHOX2BQ99453 UBL5P3-201ENST00000475112 231 ntBASIC3.63□□□□□ -1.83
PHOX2BQ99453 RPPH1-2P-201ENST00000516688 293 ntBASIC3.63□□□□□ -1.83
PHOX2BQ99453 AC090821.2-201ENST00000523552 176 ntBASIC3.63□□□□□ -1.83
PHOX2BQ99453 AL591424.2-201ENST00000617023 128 ntBASIC3.63□□□□□ -1.83
PHOX2BQ99453 MIR7111-201ENST00000619751 72 ntBASIC3.63□□□□□ -1.83
PHOX2BQ99453 MIR203B-201ENST00000636080 86 ntBASIC3.63□□□□□ -1.83
PHOX2BQ99453 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
PHOX2BQ99453 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
PHOX2BQ99453 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.62□□□□□ -1.83
PHOX2BQ99453 RNU6-833P-201ENST00000363486 107 ntBASIC3.62□□□□□ -1.83
PHOX2BQ99453 Y_RNA.219-201ENST00000364232 113 ntBASIC3.62□□□□□ -1.83
PHOX2BQ99453 MIR199A2-201ENST00000385289 110 ntBASIC3.62□□□□□ -1.83
PHOX2BQ99453 SNORD77B-201ENST00000391112 67 ntBASIC3.62□□□□□ -1.83
PHOX2BQ99453 AC083863.1-201ENST00000438811 231 ntBASIC3.62□□□□□ -1.83
PHOX2BQ99453 AL606517.2-201ENST00000442855 241 ntBASIC3.62□□□□□ -1.83
PHOX2BQ99453 AC113410.1-201ENST00000505029 247 ntBASIC3.62□□□□□ -1.83
PHOX2BQ99453 RNA5SP164-201ENST00000516533 110 ntBASIC3.62□□□□□ -1.83
PHOX2BQ99453 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.62□□□□□ -1.83
PHOX2BQ99453 IPO8P1-201ENST00000455509 3109 ntBASIC3.61□□□□□ -1.83
PHOX2BQ99453 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
PHOX2BQ99453 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
PHOX2BQ99453 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
PHOX2BQ99453 MIR422A-201ENST00000362286 90 ntBASIC3.61□□□□□ -1.83
PHOX2BQ99453 RNU4-69P-201ENST00000410677 143 ntBASIC3.61□□□□□ -1.83
PHOX2BQ99453 MIR3618-201ENST00000580330 88 ntBASIC3.61□□□□□ -1.83
PHOX2BQ99453 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.61□□□□□ -1.83
PHOX2BQ99453 HSPE1P19-201ENST00000603327 295 ntBASIC3.61□□□□□ -1.83
PHOX2BQ99453 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.61□□□□□ -1.83
PHOX2BQ99453 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.61□□□□□ -1.83
PHOX2BQ99453 MIR1245B-201ENST00000636115 69 ntBASIC3.61□□□□□ -1.83
PHOX2BQ99453 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.61□□□□□ -1.83
PHOX2BQ99453 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
PHOX2BQ99453 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC3.61□□□□□ -1.83
PHOX2BQ99453 MIRLET7C-201ENST00000362160 84 ntBASIC3.6□□□□□ -1.83
PHOX2BQ99453 RNU1-58P-201ENST00000362413 163 ntBASIC3.6□□□□□ -1.83
PHOX2BQ99453 RNU6-832P-201ENST00000363319 107 ntBASIC3.6□□□□□ -1.83
PHOX2BQ99453 RNU4-67P-201ENST00000364569 141 ntBASIC3.6□□□□□ -1.83
PHOX2BQ99453 AL445687.1-201ENST00000439946 251 ntBASIC3.6□□□□□ -1.83
PHOX2BQ99453 Y_RNA.676-201ENST00000516393 96 ntBASIC3.6□□□□□ -1.83
PHOX2BQ99453 RNU7-53P-201ENST00000516705 60 ntBASIC3.6□□□□□ -1.83
PHOX2BQ99453 MIR4524B-201ENST00000581569 115 ntBASIC3.6□□□□□ -1.83
PHOX2BQ99453 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.6□□□□□ -1.83
PHOX2BQ99453 SNORA62.6-201ENST00000606322 83 ntBASIC3.6□□□□□ -1.83
PHOX2BQ99453 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC3.6□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 107.8 ms