Protein–RNA interactions for Protein: Q96S86

HAPLN3, Hyaluronan and proteoglycan link protein 3, humanhuman

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HAPLN3Q96S86 RN7SKP101-201ENST00000411376 320 ntBASIC2.24□□□□□ -2.05
HAPLN3Q96S86 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC2.24□□□□□ -2.05
HAPLN3Q96S86 AC002984.1-201ENST00000591692 448 ntBASIC2.24□□□□□ -2.05
HAPLN3Q96S86 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.24□□□□□ -2.05
HAPLN3Q96S86 MIR338-201ENST00000636369 67 ntBASIC2.24□□□□□ -2.05
HAPLN3Q96S86 U6.108-201ENST00000637764 58 ntBASIC2.24□□□□□ -2.05
HAPLN3Q96S86 AC092881.1-201ENST00000638218 2733 ntBASIC2.24□□□□□ -2.05
HAPLN3Q96S86 ZNF702P-202ENST00000434269 1966 ntBASIC2.23□□□□□ -2.05
HAPLN3Q96S86 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.23□□□□□ -2.05
HAPLN3Q96S86 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
HAPLN3Q96S86 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
HAPLN3Q96S86 RNU6-23P-201ENST00000363283 107 ntBASIC2.23□□□□□ -2.05
HAPLN3Q96S86 RNU4-13P-201ENST00000364019 141 ntBASIC2.23□□□□□ -2.05
HAPLN3Q96S86 RNU1-52P-201ENST00000384190 164 ntBASIC2.23□□□□□ -2.05
HAPLN3Q96S86 Y_RNA.488-201ENST00000384403 102 ntBASIC2.23□□□□□ -2.05
HAPLN3Q96S86 Y_RNA.497-201ENST00000384447 98 ntBASIC2.23□□□□□ -2.05
HAPLN3Q96S86 RNA5SP467-201ENST00000391274 118 ntBASIC2.23□□□□□ -2.05
HAPLN3Q96S86 AC006461.1-201ENST00000412637 326 ntBASIC2.23□□□□□ -2.05
HAPLN3Q96S86 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.23□□□□□ -2.05
HAPLN3Q96S86 AC108210.2-201ENST00000503681 201 ntBASIC2.23□□□□□ -2.05
HAPLN3Q96S86 AC107027.2-201ENST00000512197 115 ntBASIC2.23□□□□□ -2.05
HAPLN3Q96S86 RNU6-1041P-201ENST00000516254 102 ntBASIC2.23□□□□□ -2.05
HAPLN3Q96S86 RNU6-426P-201ENST00000516464 97 ntBASIC2.23□□□□□ -2.05
HAPLN3Q96S86 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC2.23□□□□□ -2.05
HAPLN3Q96S86 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC2.23□□□□□ -2.05
HAPLN3Q96S86 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
HAPLN3Q96S86 SNORA33-201ENST00000363664 130 ntBASIC2.22□□□□□ -2.05
HAPLN3Q96S86 RNU4-41P-201ENST00000364426 143 ntBASIC2.22□□□□□ -2.05
HAPLN3Q96S86 RNU6-643P-201ENST00000384018 107 ntBASIC2.22□□□□□ -2.05
HAPLN3Q96S86 MIR515-2-201ENST00000384883 83 ntBASIC2.22□□□□□ -2.05
HAPLN3Q96S86 MIR515-1-201ENST00000384884 83 ntBASIC2.22□□□□□ -2.05
HAPLN3Q96S86 Y_RNA.587-201ENST00000391210 103 ntBASIC2.22□□□□□ -2.05
HAPLN3Q96S86 AL117342.1-201ENST00000404861 406 ntBASIC2.22□□□□□ -2.05
HAPLN3Q96S86 SNORA11.4-201ENST00000408823 129 ntBASIC2.22□□□□□ -2.05
HAPLN3Q96S86 Y_RNA.622-201ENST00000411091 108 ntBASIC2.22□□□□□ -2.05
HAPLN3Q96S86 DNAJC19P2-201ENST00000593340 302 ntBASIC2.22□□□□□ -2.05
HAPLN3Q96S86 AP001485.1-201ENST00000604799 199 ntBASIC2.22□□□□□ -2.05
HAPLN3Q96S86 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.22□□□□□ -2.05
HAPLN3Q96S86 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.05
HAPLN3Q96S86 SNORD114-1-201ENST00000362705 72 ntBASIC2.21□□□□□ -2.06
HAPLN3Q96S86 SNORD115-3-201ENST00000363100 82 ntBASIC2.21□□□□□ -2.06
HAPLN3Q96S86 RNY1P11-201ENST00000363759 113 ntBASIC2.21□□□□□ -2.06
HAPLN3Q96S86 Y_RNA.203-201ENST00000364106 102 ntBASIC2.21□□□□□ -2.06
HAPLN3Q96S86 RNU4-11P-201ENST00000365287 132 ntBASIC2.21□□□□□ -2.06
HAPLN3Q96S86 RNU6-728P-201ENST00000365375 104 ntBASIC2.21□□□□□ -2.06
HAPLN3Q96S86 RNY3P5-201ENST00000384127 102 ntBASIC2.21□□□□□ -2.06
HAPLN3Q96S86 RNU6-376P-201ENST00000384731 106 ntBASIC2.21□□□□□ -2.06
HAPLN3Q96S86 RNA5SP496-201ENST00000391240 109 ntBASIC2.21□□□□□ -2.06
HAPLN3Q96S86 HMGN2P39-201ENST00000398005 273 ntBASIC2.21□□□□□ -2.06
HAPLN3Q96S86 RNU6-1186P-201ENST00000410429 97 ntBASIC2.21□□□□□ -2.06
HAPLN3Q96S86 RNU4-43P-201ENST00000410628 137 ntBASIC2.21□□□□□ -2.06
HAPLN3Q96S86 RNU6-717P-201ENST00000459076 104 ntBASIC2.21□□□□□ -2.06
HAPLN3Q96S86 AC011604.1-201ENST00000545978 196 ntBASIC2.21□□□□□ -2.06
HAPLN3Q96S86 AC091178.2-201ENST00000584401 117 ntBASIC2.21□□□□□ -2.06
HAPLN3Q96S86 AC005786.1-201ENST00000588553 154 ntBASIC2.21□□□□□ -2.06
HAPLN3Q96S86 AC073413.2-201ENST00000604332 360 ntBASIC2.21□□□□□ -2.06
HAPLN3Q96S86 SNORD14A-201ENST00000606526 91 ntBASIC2.21□□□□□ -2.06
HAPLN3Q96S86 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC2.21□□□□□ -2.06
HAPLN3Q96S86 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.21□□□□□ -2.06
HAPLN3Q96S86 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC2.21□□□□□ -2.06
HAPLN3Q96S86 SNORD45.3-201ENST00000363836 72 ntBASIC2.2□□□□□ -2.06
HAPLN3Q96S86 Y_RNA.796-201ENST00000364268 102 ntBASIC2.2□□□□□ -2.06
HAPLN3Q96S86 Y_RNA.799-201ENST00000364992 102 ntBASIC2.2□□□□□ -2.06
HAPLN3Q96S86 RNA5SP138-201ENST00000365098 114 ntBASIC2.2□□□□□ -2.06
HAPLN3Q96S86 Y_RNA.337-201ENST00000365312 102 ntBASIC2.2□□□□□ -2.06
HAPLN3Q96S86 Y_RNA.343-201ENST00000365354 112 ntBASIC2.2□□□□□ -2.06
HAPLN3Q96S86 RNU6-768P-201ENST00000384683 107 ntBASIC2.2□□□□□ -2.06
HAPLN3Q96S86 MIR518A2-201ENST00000384966 87 ntBASIC2.2□□□□□ -2.06
HAPLN3Q96S86 RNU6-482P-201ENST00000391068 107 ntBASIC2.2□□□□□ -2.06
HAPLN3Q96S86 Y_RNA.586-201ENST00000391146 98 ntBASIC2.2□□□□□ -2.06
HAPLN3Q96S86 RNA5SP465-201ENST00000391195 109 ntBASIC2.2□□□□□ -2.06
HAPLN3Q96S86 RNU6-257P-201ENST00000410238 98 ntBASIC2.2□□□□□ -2.06
HAPLN3Q96S86 RNA5SP270-201ENST00000411361 118 ntBASIC2.2□□□□□ -2.06
HAPLN3Q96S86 CST2P1-201ENST00000425770 87 ntBASIC2.2□□□□□ -2.06
HAPLN3Q96S86 RNU7-99P-201ENST00000516271 62 ntBASIC2.2□□□□□ -2.06
HAPLN3Q96S86 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC2.2□□□□□ -2.06
HAPLN3Q96S86 MIR548X2-201ENST00000579776 100 ntBASIC2.2□□□□□ -2.06
HAPLN3Q96S86 MIR5002-201ENST00000584713 97 ntBASIC2.2□□□□□ -2.06
HAPLN3Q96S86 AC007229.1-201ENST00000590455 412 ntBASIC2.2□□□□□ -2.06
HAPLN3Q96S86 AL049861.1-201ENST00000603130 150 ntBASIC2.2□□□□□ -2.06
HAPLN3Q96S86 MIR219B-201ENST00000637023 88 ntBASIC2.2□□□□□ -2.06
HAPLN3Q96S86 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.19□□□□□ -2.06
HAPLN3Q96S86 RNU6-1209P-201ENST00000363655 107 ntBASIC2.19□□□□□ -2.06
HAPLN3Q96S86 RNU6-484P-201ENST00000384016 107 ntBASIC2.19□□□□□ -2.06
HAPLN3Q96S86 RNU11-5P-201ENST00000391216 129 ntBASIC2.19□□□□□ -2.06
HAPLN3Q96S86 BX510359.4-201ENST00000423750 193 ntBASIC2.19□□□□□ -2.06
HAPLN3Q96S86 RNU7-197P-201ENST00000458836 62 ntBASIC2.19□□□□□ -2.06
HAPLN3Q96S86 RPL23AP42-201ENST00000471152 471 ntBASIC2.19□□□□□ -2.06
HAPLN3Q96S86 RNU6-1096P-201ENST00000517089 102 ntBASIC2.19□□□□□ -2.06
HAPLN3Q96S86 AC015712.3-201ENST00000559380 164 ntBASIC2.19□□□□□ -2.06
HAPLN3Q96S86 RPL23AP91-201ENST00000569211 455 ntBASIC2.19□□□□□ -2.06
HAPLN3Q96S86 AL359075.3-201ENST00000613288 217 ntBASIC2.19□□□□□ -2.06
HAPLN3Q96S86 RNU11-3P-201ENST00000391111 133 ntBASIC2.18□□□□□ -2.06
HAPLN3Q96S86 MIR1283-2-201ENST00000408621 87 ntBASIC2.18□□□□□ -2.06
HAPLN3Q96S86 CYCSP49-201ENST00000420810 319 ntBASIC2.18□□□□□ -2.06
HAPLN3Q96S86 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC2.18□□□□□ -2.06
HAPLN3Q96S86 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC2.18□□□□□ -2.06
HAPLN3Q96S86 SNORD11-201ENST00000459124 84 ntBASIC2.18□□□□□ -2.06
HAPLN3Q96S86 SNORA25.12-201ENST00000516202 82 ntBASIC2.18□□□□□ -2.06
HAPLN3Q96S86 MIR514B-201ENST00000516774 80 ntBASIC2.18□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 133.9 ms