Protein–RNA interactions for Protein: Q8TEC5

SH3RF2, Putative E3 ubiquitin-protein ligase SH3RF2, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF2Q8TEC5 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.49□□□□□ -2.01
SH3RF2Q8TEC5 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.49□□□□□ -2.01
SH3RF2Q8TEC5 MIR1291-201ENST00000627649 87 ntBASIC2.49□□□□□ -2.01
SH3RF2Q8TEC5 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
SH3RF2Q8TEC5 MIR126-201ENST00000362291 85 ntBASIC2.48□□□□□ -2.01
SH3RF2Q8TEC5 SNORA1B-201ENST00000362535 133 ntBASIC2.48□□□□□ -2.01
SH3RF2Q8TEC5 RNU6-978P-201ENST00000364371 103 ntBASIC2.48□□□□□ -2.01
SH3RF2Q8TEC5 RNU6-1019P-201ENST00000364424 107 ntBASIC2.48□□□□□ -2.01
SH3RF2Q8TEC5 MIR539-201ENST00000365690 78 ntBASIC2.48□□□□□ -2.01
SH3RF2Q8TEC5 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
SH3RF2Q8TEC5 RNA5SP465-201ENST00000391195 109 ntBASIC2.48□□□□□ -2.01
SH3RF2Q8TEC5 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.48□□□□□ -2.01
SH3RF2Q8TEC5 RNU6-588P-201ENST00000410281 105 ntBASIC2.48□□□□□ -2.01
SH3RF2Q8TEC5 RNA5SP425-201ENST00000410336 112 ntBASIC2.48□□□□□ -2.01
SH3RF2Q8TEC5 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC2.48□□□□□ -2.01
SH3RF2Q8TEC5 RNA5SP281-201ENST00000516504 135 ntBASIC2.48□□□□□ -2.01
SH3RF2Q8TEC5 RNU6-826P-201ENST00000516827 104 ntBASIC2.48□□□□□ -2.01
SH3RF2Q8TEC5 TUG1_4.1-201ENST00000619464 181 ntBASIC2.48□□□□□ -2.01
SH3RF2Q8TEC5 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
SH3RF2Q8TEC5 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
SH3RF2Q8TEC5 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.48□□□□□ -2.01
SH3RF2Q8TEC5 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.48□□□□□ -2.01
SH3RF2Q8TEC5 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.48□□□□□ -2.01
SH3RF2Q8TEC5 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.47□□□□□ -2.01
SH3RF2Q8TEC5 AC080100.1-201ENST00000624239 5356 ntBASIC2.47□□□□□ -2.01
SH3RF2Q8TEC5 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
SH3RF2Q8TEC5 Y_RNA.420-201ENST00000384043 110 ntBASIC2.47□□□□□ -2.01
SH3RF2Q8TEC5 RNU11-3P-201ENST00000391111 133 ntBASIC2.47□□□□□ -2.01
SH3RF2Q8TEC5 RN7SKP192-201ENST00000411291 327 ntBASIC2.47□□□□□ -2.01
SH3RF2Q8TEC5 BX510359.4-201ENST00000423750 193 ntBASIC2.47□□□□□ -2.01
SH3RF2Q8TEC5 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.47□□□□□ -2.01
SH3RF2Q8TEC5 FTH1P12-201ENST00000432137 551 ntBASIC2.47□□□□□ -2.01
SH3RF2Q8TEC5 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.47□□□□□ -2.01
SH3RF2Q8TEC5 RNU7-197P-201ENST00000458836 62 ntBASIC2.47□□□□□ -2.01
SH3RF2Q8TEC5 NDUFA4P2-201ENST00000489989 244 ntBASIC2.47□□□□□ -2.01
SH3RF2Q8TEC5 RNU6-504P-201ENST00000516568 104 ntBASIC2.47□□□□□ -2.01
SH3RF2Q8TEC5 AC022202.1-201ENST00000613515 211 ntBASIC2.47□□□□□ -2.01
SH3RF2Q8TEC5 AP001340.1-201ENST00000624405 217 ntBASIC2.47□□□□□ -2.01
SH3RF2Q8TEC5 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC2.47□□□□□ -2.01
SH3RF2Q8TEC5 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
SH3RF2Q8TEC5 AC016717.2-201ENST00000609089 5141 ntBASIC2.47□□□□□ -2.01
SH3RF2Q8TEC5 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.01
SH3RF2Q8TEC5 RNA5SP482-201ENST00000391269 118 ntBASIC2.46□□□□□ -2.02
SH3RF2Q8TEC5 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.46□□□□□ -2.02
SH3RF2Q8TEC5 AC007064.1-201ENST00000412238 351 ntBASIC2.46□□□□□ -2.02
SH3RF2Q8TEC5 AC245047.3-201ENST00000429428 127 ntBASIC2.46□□□□□ -2.02
SH3RF2Q8TEC5 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC2.46□□□□□ -2.02
SH3RF2Q8TEC5 MIR3670-2-201ENST00000582974 65 ntBASIC2.46□□□□□ -2.02
SH3RF2Q8TEC5 MIR3670-1-201ENST00000584160 65 ntBASIC2.46□□□□□ -2.02
SH3RF2Q8TEC5 MIR3670-3-201ENST00000584855 65 ntBASIC2.46□□□□□ -2.02
SH3RF2Q8TEC5 AC008507.4-201ENST00000585464 127 ntBASIC2.46□□□□□ -2.02
SH3RF2Q8TEC5 MIR3670-4-201ENST00000612260 65 ntBASIC2.46□□□□□ -2.02
SH3RF2Q8TEC5 AL591926.4-201ENST00000616895 298 ntBASIC2.46□□□□□ -2.02
SH3RF2Q8TEC5 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.46□□□□□ -2.02
SH3RF2Q8TEC5 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.45□□□□□ -2.02
SH3RF2Q8TEC5 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.45□□□□□ -2.02
SH3RF2Q8TEC5 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
SH3RF2Q8TEC5 MIR21-201ENST00000362134 72 ntBASIC2.45□□□□□ -2.02
SH3RF2Q8TEC5 Y_RNA.91-201ENST00000363042 107 ntBASIC2.45□□□□□ -2.02
SH3RF2Q8TEC5 RNU1-109P-201ENST00000383960 147 ntBASIC2.45□□□□□ -2.02
SH3RF2Q8TEC5 Y_RNA.486-201ENST00000384398 107 ntBASIC2.45□□□□□ -2.02
SH3RF2Q8TEC5 MIR802-201ENST00000390235 94 ntBASIC2.45□□□□□ -2.02
SH3RF2Q8TEC5 RN7SKP223-201ENST00000410582 62 ntBASIC2.45□□□□□ -2.02
SH3RF2Q8TEC5 MLLT10P1-201ENST00000418346 262 ntBASIC2.45□□□□□ -2.02
SH3RF2Q8TEC5 MTND4LP9-201ENST00000427694 174 ntBASIC2.45□□□□□ -2.02
SH3RF2Q8TEC5 AC092991.1-201ENST00000477176 376 ntBASIC2.45□□□□□ -2.02
SH3RF2Q8TEC5 MRPS17P9-201ENST00000511924 393 ntBASIC2.45□□□□□ -2.02
SH3RF2Q8TEC5 AC004486.1-201ENST00000546846 233 ntBASIC2.45□□□□□ -2.02
SH3RF2Q8TEC5 MIR4658-201ENST00000584344 65 ntBASIC2.45□□□□□ -2.02
SH3RF2Q8TEC5 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
SH3RF2Q8TEC5 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
SH3RF2Q8TEC5 RNU6-22P-201ENST00000384355 107 ntBASIC2.44□□□□□ -2.02
SH3RF2Q8TEC5 RNU6-950P-201ENST00000384651 107 ntBASIC2.44□□□□□ -2.02
SH3RF2Q8TEC5 MIR522-201ENST00000385071 87 ntBASIC2.44□□□□□ -2.02
SH3RF2Q8TEC5 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
SH3RF2Q8TEC5 SNORA12.1-201ENST00000390873 148 ntBASIC2.44□□□□□ -2.02
SH3RF2Q8TEC5 Y_RNA.584-201ENST00000391090 114 ntBASIC2.44□□□□□ -2.02
SH3RF2Q8TEC5 AL356320.1-201ENST00000429616 163 ntBASIC2.44□□□□□ -2.02
SH3RF2Q8TEC5 RNA5SP272-201ENST00000516095 111 ntBASIC2.44□□□□□ -2.02
SH3RF2Q8TEC5 RNU6-479P-201ENST00000516348 105 ntBASIC2.44□□□□□ -2.02
SH3RF2Q8TEC5 AP001328.1-201ENST00000528550 176 ntBASIC2.44□□□□□ -2.02
SH3RF2Q8TEC5 MIR4762-201ENST00000585261 75 ntBASIC2.44□□□□□ -2.02
SH3RF2Q8TEC5 AC022217.4-201ENST00000604389 163 ntBASIC2.44□□□□□ -2.02
SH3RF2Q8TEC5 SNORA28-201ENST00000606769 126 ntBASIC2.44□□□□□ -2.02
SH3RF2Q8TEC5 AC022513.1-201ENST00000624512 117 ntBASIC2.44□□□□□ -2.02
SH3RF2Q8TEC5 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.44□□□□□ -2.02
SH3RF2Q8TEC5 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
SH3RF2Q8TEC5 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
SH3RF2Q8TEC5 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
SH3RF2Q8TEC5 Y_RNA.251-201ENST00000364551 99 ntBASIC2.43□□□□□ -2.02
SH3RF2Q8TEC5 RNU6-1082P-201ENST00000364574 107 ntBASIC2.43□□□□□ -2.02
SH3RF2Q8TEC5 Y_RNA.265-201ENST00000364677 108 ntBASIC2.43□□□□□ -2.02
SH3RF2Q8TEC5 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
SH3RF2Q8TEC5 AC084364.2-201ENST00000546924 395 ntBASIC2.43□□□□□ -2.02
SH3RF2Q8TEC5 AC067747.1-201ENST00000608026 250 ntBASIC2.43□□□□□ -2.02
SH3RF2Q8TEC5 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.43□□□□□ -2.02
SH3RF2Q8TEC5 VTRNA1-1-201ENST00000363120 99 ntBASIC2.42□□□□□ -2.02
SH3RF2Q8TEC5 SNORD68-201ENST00000363214 84 ntBASIC2.42□□□□□ -2.02
SH3RF2Q8TEC5 U8.5-201ENST00000364528 136 ntBASIC2.42□□□□□ -2.02
SH3RF2Q8TEC5 SNORD24-201ENST00000383884 75 ntBASIC2.42□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 135.4 ms