Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 RNU7-57P-201ENST00000459540 60 ntBASIC-1.13□□□□□ -2.59
CCDC168Q8NDH2 SNORD116-30-201ENST00000516468 85 ntBASIC-1.13□□□□□ -2.59
CCDC168Q8NDH2 AC090615.1-201ENST00000577519 154 ntBASIC-1.13□□□□□ -2.59
CCDC168Q8NDH2 Y_RNA.33-201ENST00000362591 102 ntBASIC-1.14□□□□□ -2.59
CCDC168Q8NDH2 SNORD115-13-201ENST00000363358 82 ntBASIC-1.14□□□□□ -2.59
CCDC168Q8NDH2 SNORD114-29-201ENST00000364819 70 ntBASIC-1.14□□□□□ -2.59
CCDC168Q8NDH2 MIR1305-201ENST00000408300 86 ntBASIC-1.14□□□□□ -2.59
CCDC168Q8NDH2 AC004866.1-201ENST00000411748 78 ntBASIC-1.14□□□□□ -2.59
CCDC168Q8NDH2 Z98949.2-201ENST00000440996 144 ntBASIC-1.14□□□□□ -2.59
CCDC168Q8NDH2 MTCO1P31-201ENST00000506355 492 ntBASIC-1.14□□□□□ -2.59
CCDC168Q8NDH2 uc_338.10-201ENST00000621872 182 ntBASIC-1.14□□□□□ -2.59
CCDC168Q8NDH2 RNA5SP26-201ENST00000362406 119 ntBASIC-1.14□□□□□ -2.59
CCDC168Q8NDH2 Y_RNA.153-201ENST00000363615 91 ntBASIC-1.14□□□□□ -2.59
CCDC168Q8NDH2 Y_RNA.220-201ENST00000364244 109 ntBASIC-1.14□□□□□ -2.59
CCDC168Q8NDH2 SNORD115-15-201ENST00000364809 81 ntBASIC-1.14□□□□□ -2.59
CCDC168Q8NDH2 MIR509-1-201ENST00000385265 94 ntBASIC-1.14□□□□□ -2.59
CCDC168Q8NDH2 MIR509-2-201ENST00000390724 91 ntBASIC-1.14□□□□□ -2.59
CCDC168Q8NDH2 AC115990.1-201ENST00000526957 301 ntBASIC-1.14□□□□□ -2.59
CCDC168Q8NDH2 AC114491.1-201ENST00000416095 246 ntBASIC-1.15□□□□□ -2.59
CCDC168Q8NDH2 AC019178.2-201ENST00000423595 505 ntBASIC-1.15□□□□□ -2.59
CCDC168Q8NDH2 RNU2-10P-201ENST00000516375 211 ntBASIC-1.15□□□□□ -2.59
CCDC168Q8NDH2 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC-1.15□□□□□ -2.59
CCDC168Q8NDH2 MPP6-209ENST00000625307 126 ntTSL 5 BASIC-1.15□□□□□ -2.59
CCDC168Q8NDH2 Y_RNA.76-201ENST00000362931 109 ntBASIC-1.15□□□□□ -2.59
CCDC168Q8NDH2 Y_RNA.215-201ENST00000364204 112 ntBASIC-1.15□□□□□ -2.59
CCDC168Q8NDH2 SNORD115-23-201ENST00000364461 82 ntBASIC-1.15□□□□□ -2.59
CCDC168Q8NDH2 RNY4P10-201ENST00000365571 96 ntBASIC-1.15□□□□□ -2.59
CCDC168Q8NDH2 RPS29P13-201ENST00000402041 169 ntBASIC-1.15□□□□□ -2.59
CCDC168Q8NDH2 AC013470.1-201ENST00000453438 462 ntBASIC-1.15□□□□□ -2.59
CCDC168Q8NDH2 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC-1.15□□□□□ -2.59
CCDC168Q8NDH2 SNORA25.17-201ENST00000517184 124 ntBASIC-1.15□□□□□ -2.59
CCDC168Q8NDH2 AL358944.1-201ENST00000528537 144 ntBASIC-1.15□□□□□ -2.59
CCDC168Q8NDH2 MIR4423-201ENST00000580922 80 ntBASIC-1.15□□□□□ -2.59
CCDC168Q8NDH2 Y_RNA.7-201ENST00000362352 102 ntBASIC-1.16□□□□□ -2.59
CCDC168Q8NDH2 RNU6-1125P-201ENST00000363601 107 ntBASIC-1.16□□□□□ -2.59
CCDC168Q8NDH2 Y_RNA.372-201ENST00000365599 102 ntBASIC-1.16□□□□□ -2.59
CCDC168Q8NDH2 MIR136-201ENST00000385207 82 ntBASIC-1.16□□□□□ -2.59
CCDC168Q8NDH2 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC-1.16□□□□□ -2.59
CCDC168Q8NDH2 AC084149.2-201ENST00000438443 797 ntTSL 5 BASIC-1.16□□□□□ -2.59
CCDC168Q8NDH2 RNU7-182P-201ENST00000459009 62 ntBASIC-1.16□□□□□ -2.59
CCDC168Q8NDH2 AC092925.1-201ENST00000470739 493 ntTSL 3 BASIC-1.16□□□□□ -2.59
CCDC168Q8NDH2 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC-1.16□□□□□ -2.59
CCDC168Q8NDH2 SNORA43.2-201ENST00000516652 128 ntBASIC-1.16□□□□□ -2.59
CCDC168Q8NDH2 RNU7-28P-201ENST00000516759 62 ntBASIC-1.16□□□□□ -2.59
CCDC168Q8NDH2 AC068339.1-201ENST00000526965 141 ntBASIC-1.16□□□□□ -2.59
CCDC168Q8NDH2 RN7SKP299-201ENST00000606679 301 ntBASIC-1.16□□□□□ -2.59
CCDC168Q8NDH2 AC096586.1-201ENST00000610267 561 ntBASIC-1.16□□□□□ -2.59
CCDC168Q8NDH2 5S_rRNA.15-201ENST00000611169 127 ntBASIC-1.16□□□□□ -2.59
CCDC168Q8NDH2 RNU6-552P-201ENST00000362869 119 ntBASIC-1.16□□□□□ -2.6
CCDC168Q8NDH2 Y_RNA.75-201ENST00000362927 97 ntBASIC-1.16□□□□□ -2.6
CCDC168Q8NDH2 RNU6-1240P-201ENST00000365155 104 ntBASIC-1.16□□□□□ -2.6
CCDC168Q8NDH2 RNU6-746P-201ENST00000384112 109 ntBASIC-1.16□□□□□ -2.6
CCDC168Q8NDH2 RNU6-378P-201ENST00000384324 107 ntBASIC-1.16□□□□□ -2.6
CCDC168Q8NDH2 SNORD93-201ENST00000408813 74 ntBASIC-1.16□□□□□ -2.6
CCDC168Q8NDH2 AC116353.2-201ENST00000505332 712 ntBASIC-1.16□□□□□ -2.6
CCDC168Q8NDH2 RNU6-1116P-201ENST00000517269 99 ntBASIC-1.16□□□□□ -2.6
CCDC168Q8NDH2 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC-1.16□□□□□ -2.6
CCDC168Q8NDH2 MIR4748-201ENST00000578076 82 ntBASIC-1.16□□□□□ -2.6
CCDC168Q8NDH2 AL445264.1-201ENST00000621719 171 ntBASIC-1.16□□□□□ -2.6
CCDC168Q8NDH2 MIR20A-201ENST00000362279 71 ntBASIC-1.17□□□□□ -2.6
CCDC168Q8NDH2 U3.4-201ENST00000363352 213 ntBASIC-1.17□□□□□ -2.6
CCDC168Q8NDH2 SNORD113-7-201ENST00000363762 77 ntBASIC-1.17□□□□□ -2.6
CCDC168Q8NDH2 RNU4-24P-201ENST00000364565 139 ntBASIC-1.17□□□□□ -2.6
CCDC168Q8NDH2 Y_RNA.517-201ENST00000384551 106 ntBASIC-1.17□□□□□ -2.6
CCDC168Q8NDH2 SNORD41.1-201ENST00000391000 69 ntBASIC-1.17□□□□□ -2.6
CCDC168Q8NDH2 RPL39P25-201ENST00000449384 154 ntBASIC-1.17□□□□□ -2.6
CCDC168Q8NDH2 MTND3P5-201ENST00000512798 333 ntBASIC-1.17□□□□□ -2.6
CCDC168Q8NDH2 MIR548AR-201ENST00000582191 57 ntBASIC-1.17□□□□□ -2.6
CCDC168Q8NDH2 SNORD115-40-201ENST00000606510 82 ntBASIC-1.17□□□□□ -2.6
CCDC168Q8NDH2 AC093783.1-201ENST00000612976 329 ntBASIC-1.17□□□□□ -2.6
CCDC168Q8NDH2 SGO1P1-201ENST00000603525 1447 ntBASIC-1.17□□□□□ -2.6
CCDC168Q8NDH2 RNU6-354P-201ENST00000383862 107 ntBASIC-1.17□□□□□ -2.6
CCDC168Q8NDH2 RNU6-610P-201ENST00000384264 107 ntBASIC-1.17□□□□□ -2.6
CCDC168Q8NDH2 SNORA75.4-201ENST00000391278 119 ntBASIC-1.17□□□□□ -2.6
CCDC168Q8NDH2 RNU6-588P-201ENST00000410281 105 ntBASIC-1.17□□□□□ -2.6
CCDC168Q8NDH2 RNU6-602P-201ENST00000411155 105 ntBASIC-1.17□□□□□ -2.6
CCDC168Q8NDH2 RPL22P17-201ENST00000438729 315 ntBASIC-1.17□□□□□ -2.6
CCDC168Q8NDH2 AC098614.3-201ENST00000438957 440 ntBASIC-1.17□□□□□ -2.6
CCDC168Q8NDH2 AL049829.1-201ENST00000465411 156 ntBASIC-1.17□□□□□ -2.6
CCDC168Q8NDH2 Y_RNA.695-201ENST00000516715 107 ntBASIC-1.17□□□□□ -2.6
CCDC168Q8NDH2 RNA5SP106-201ENST00000517274 100 ntBASIC-1.17□□□□□ -2.6
CCDC168Q8NDH2 MTND1P8-201ENST00000571424 950 ntBASIC-1.17□□□□□ -2.6
CCDC168Q8NDH2 MIR3146-201ENST00000580367 79 ntBASIC-1.17□□□□□ -2.6
CCDC168Q8NDH2 MIR548AM-201ENST00000584298 74 ntBASIC-1.17□□□□□ -2.6
CCDC168Q8NDH2 MIR4438-201ENST00000585271 93 ntBASIC-1.17□□□□□ -2.6
CCDC168Q8NDH2 AL356055.1-201ENST00000602528 446 ntBASIC-1.17□□□□□ -2.6
CCDC168Q8NDH2 AL049777.1-201ENST00000622740 518 ntBASIC-1.17□□□□□ -2.6
CCDC168Q8NDH2 U4.7-201ENST00000638126 106 ntBASIC-1.17□□□□□ -2.6
CCDC168Q8NDH2 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC-1.17□□□□□ -2.6
CCDC168Q8NDH2 Y_RNA.148-201ENST00000363557 117 ntBASIC-1.18□□□□□ -2.6
CCDC168Q8NDH2 SNORD28B-201ENST00000390993 75 ntBASIC-1.18□□□□□ -2.6
CCDC168Q8NDH2 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC-1.18□□□□□ -2.6
CCDC168Q8NDH2 AC022447.4-201ENST00000504053 364 ntBASIC-1.18□□□□□ -2.6
CCDC168Q8NDH2 RNU6-58P-201ENST00000517143 103 ntBASIC-1.18□□□□□ -2.6
CCDC168Q8NDH2 RNA5SP454-201ENST00000517231 127 ntBASIC-1.18□□□□□ -2.6
CCDC168Q8NDH2 AC131281.1-201ENST00000522984 164 ntBASIC-1.18□□□□□ -2.6
CCDC168Q8NDH2 POLR3GP1-201ENST00000594073 261 ntBASIC-1.18□□□□□ -2.6
CCDC168Q8NDH2 RNU6-90P-201ENST00000606352 106 ntBASIC-1.18□□□□□ -2.6
CCDC168Q8NDH2 U4.1-201ENST00000620349 87 ntBASIC-1.18□□□□□ -2.6
CCDC168Q8NDH2 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC-1.18□□□□□ -2.6
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms