Protein–RNA interactions for Protein: Q8NB14

USP38, Ubiquitin carboxyl-terminal hydrolase 38, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP38Q8NB14 snoU2_19.2-201ENST00000363024 80 ntBASIC1.76□□□□□ -2.13
USP38Q8NB14 Y_RNA.276-201ENST00000364732 109 ntBASIC1.76□□□□□ -2.13
USP38Q8NB14 RNA5SP259-201ENST00000365541 109 ntBASIC1.76□□□□□ -2.13
USP38Q8NB14 Y_RNA.459-201ENST00000384251 102 ntBASIC1.76□□□□□ -2.13
USP38Q8NB14 MIR517C-201ENST00000385103 95 ntBASIC1.76□□□□□ -2.13
USP38Q8NB14 AL731563.1-201ENST00000442202 214 ntBASIC1.76□□□□□ -2.13
USP38Q8NB14 MTND5P22-201ENST00000458380 195 ntBASIC1.76□□□□□ -2.13
USP38Q8NB14 HMGN1P10-201ENST00000474557 553 ntBASIC1.76□□□□□ -2.13
USP38Q8NB14 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.76□□□□□ -2.13
USP38Q8NB14 SUMO2P16-201ENST00000519475 264 ntBASIC1.76□□□□□ -2.13
USP38Q8NB14 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.76□□□□□ -2.13
USP38Q8NB14 AL162424.1-201ENST00000602325 221 ntBASIC1.76□□□□□ -2.13
USP38Q8NB14 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC1.76□□□□□ -2.13
USP38Q8NB14 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
USP38Q8NB14 SNORD68-201ENST00000363214 84 ntBASIC1.75□□□□□ -2.13
USP38Q8NB14 RNU6-290P-201ENST00000365212 101 ntBASIC1.75□□□□□ -2.13
USP38Q8NB14 RNU6-514P-201ENST00000384208 107 ntBASIC1.75□□□□□ -2.13
USP38Q8NB14 Y_RNA.456-201ENST00000384232 111 ntBASIC1.75□□□□□ -2.13
USP38Q8NB14 Y_RNA.512-201ENST00000384518 102 ntBASIC1.75□□□□□ -2.13
USP38Q8NB14 Y_RNA.541-201ENST00000384640 113 ntBASIC1.75□□□□□ -2.13
USP38Q8NB14 RNU6-1248P-201ENST00000391096 64 ntBASIC1.75□□□□□ -2.13
USP38Q8NB14 SNORA53-201ENST00000391141 249 ntBASIC1.75□□□□□ -2.13
USP38Q8NB14 AC099513.1-201ENST00000490423 301 ntBASIC1.75□□□□□ -2.13
USP38Q8NB14 AC117454.1-201ENST00000491120 168 ntBASIC1.75□□□□□ -2.13
USP38Q8NB14 AL161670.1-201ENST00000554348 137 ntBASIC1.75□□□□□ -2.13
USP38Q8NB14 SNORA77B-201ENST00000578179 125 ntBASIC1.75□□□□□ -2.13
USP38Q8NB14 AL512605.2-201ENST00000592972 256 ntBASIC1.75□□□□□ -2.13
USP38Q8NB14 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
USP38Q8NB14 SNORA25.1-201ENST00000362326 128 ntBASIC1.74□□□□□ -2.13
USP38Q8NB14 SNORA63C-201ENST00000364578 129 ntBASIC1.74□□□□□ -2.13
USP38Q8NB14 RNU1-93P-201ENST00000364704 169 ntBASIC1.74□□□□□ -2.13
USP38Q8NB14 Y_RNA.310-201ENST00000365063 113 ntBASIC1.74□□□□□ -2.13
USP38Q8NB14 Y_RNA.368-201ENST00000365547 113 ntBASIC1.74□□□□□ -2.13
USP38Q8NB14 Y_RNA.418-201ENST00000384029 102 ntBASIC1.74□□□□□ -2.13
USP38Q8NB14 MIR520E-201ENST00000384867 87 ntBASIC1.74□□□□□ -2.13
USP38Q8NB14 MIR513A1-201ENST00000385138 129 ntBASIC1.74□□□□□ -2.13
USP38Q8NB14 SNORA67.6-201ENST00000391093 99 ntBASIC1.74□□□□□ -2.13
USP38Q8NB14 MLLT10P1-201ENST00000418346 262 ntBASIC1.74□□□□□ -2.13
USP38Q8NB14 PGBD4P5-201ENST00000445958 426 ntBASIC1.74□□□□□ -2.13
USP38Q8NB14 RPS29P1-201ENST00000465274 159 ntBASIC1.74□□□□□ -2.13
USP38Q8NB14 SCARNA24.2-201ENST00000516968 130 ntBASIC1.74□□□□□ -2.13
USP38Q8NB14 AC019176.1-201ENST00000518519 225 ntBASIC1.74□□□□□ -2.13
USP38Q8NB14 AC008269.2-201ENST00000561915 1105 ntBASIC1.74□□□□□ -2.13
USP38Q8NB14 POLR3GP1-201ENST00000594073 261 ntBASIC1.74□□□□□ -2.13
USP38Q8NB14 AC073349.3-201ENST00000617616 186 ntBASIC1.74□□□□□ -2.13
USP38Q8NB14 AC007742.2-201ENST00000618226 398 ntBASIC1.74□□□□□ -2.13
USP38Q8NB14 SNORD3E-202ENST00000627253 216 ntBASIC1.74□□□□□ -2.13
USP38Q8NB14 MIR126-201ENST00000362291 85 ntBASIC1.73□□□□□ -2.13
USP38Q8NB14 Y_RNA.16-201ENST00000362421 102 ntBASIC1.73□□□□□ -2.13
USP38Q8NB14 Y_RNA.145-201ENST00000363527 102 ntBASIC1.73□□□□□ -2.13
USP38Q8NB14 RNU6-1048P-201ENST00000364054 107 ntBASIC1.73□□□□□ -2.13
USP38Q8NB14 RNU6-1109P-201ENST00000391187 107 ntBASIC1.73□□□□□ -2.13
USP38Q8NB14 RN7SKP101-201ENST00000411376 320 ntBASIC1.73□□□□□ -2.13
USP38Q8NB14 CALM2P4-201ENST00000430810 426 ntBASIC1.73□□□□□ -2.13
USP38Q8NB14 RNU6-191P-201ENST00000516295 94 ntBASIC1.73□□□□□ -2.13
USP38Q8NB14 RNU7-28P-201ENST00000516759 62 ntBASIC1.73□□□□□ -2.13
USP38Q8NB14 RNU2-31P-201ENST00000516954 155 ntBASIC1.73□□□□□ -2.13
USP38Q8NB14 RNU1-92P-201ENST00000517017 135 ntBASIC1.73□□□□□ -2.13
USP38Q8NB14 MIR4778-201ENST00000577635 80 ntBASIC1.73□□□□□ -2.13
USP38Q8NB14 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.73□□□□□ -2.13
USP38Q8NB14 Y_RNA.84-201ENST00000363011 104 ntBASIC1.72□□□□□ -2.13
USP38Q8NB14 RNU4-41P-201ENST00000364426 143 ntBASIC1.72□□□□□ -2.13
USP38Q8NB14 RNA5SP482-201ENST00000391269 118 ntBASIC1.72□□□□□ -2.13
USP38Q8NB14 MIR1323-201ENST00000408090 73 ntBASIC1.72□□□□□ -2.13
USP38Q8NB14 MTCO1P5-201ENST00000433573 344 ntBASIC1.72□□□□□ -2.13
USP38Q8NB14 AL135790.2-201ENST00000437701 267 ntBASIC1.72□□□□□ -2.13
USP38Q8NB14 RPL23AP54-201ENST00000495129 419 ntBASIC1.72□□□□□ -2.13
USP38Q8NB14 RNA5SP168-201ENST00000516642 112 ntBASIC1.72□□□□□ -2.13
USP38Q8NB14 MIR4719-201ENST00000585233 84 ntBASIC1.72□□□□□ -2.13
USP38Q8NB14 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.72□□□□□ -2.13
USP38Q8NB14 AC134026.1-201ENST00000623249 2239 ntBASIC1.71□□□□□ -2.14
USP38Q8NB14 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC1.71□□□□□ -2.14
USP38Q8NB14 ZNF209P-201ENST00000593450 2304 ntBASIC1.71□□□□□ -2.14
USP38Q8NB14 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
USP38Q8NB14 RNU6-1123P-201ENST00000362347 106 ntBASIC1.71□□□□□ -2.14
USP38Q8NB14 U8.7-201ENST00000364940 136 ntBASIC1.71□□□□□ -2.14
USP38Q8NB14 RNU6-997P-201ENST00000384725 107 ntBASIC1.71□□□□□ -2.14
USP38Q8NB14 SNORA12.1-201ENST00000390873 148 ntBASIC1.71□□□□□ -2.14
USP38Q8NB14 U8.16-201ENST00000391279 133 ntBASIC1.71□□□□□ -2.14
USP38Q8NB14 AL161935.2-201ENST00000414627 60 ntBASIC1.71□□□□□ -2.14
USP38Q8NB14 OR9P1P-201ENST00000496431 281 ntBASIC1.71□□□□□ -2.14
USP38Q8NB14 RNA5SP436-201ENST00000516020 115 ntBASIC1.71□□□□□ -2.14
USP38Q8NB14 RNU7-12P-201ENST00000516030 62 ntBASIC1.71□□□□□ -2.14
USP38Q8NB14 RNU6-327P-201ENST00000516270 127 ntBASIC1.71□□□□□ -2.14
USP38Q8NB14 RNU6-1223P-201ENST00000517124 104 ntBASIC1.71□□□□□ -2.14
USP38Q8NB14 SNORA31.24-201ENST00000517232 57 ntBASIC1.71□□□□□ -2.14
USP38Q8NB14 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.71□□□□□ -2.14
USP38Q8NB14 AL358944.1-201ENST00000528537 144 ntBASIC1.71□□□□□ -2.14
USP38Q8NB14 AC024405.2-202ENST00000532731 184 ntBASIC1.71□□□□□ -2.14
USP38Q8NB14 AL353770.2-201ENST00000620024 78 ntBASIC1.71□□□□□ -2.14
USP38Q8NB14 AC106754.2-201ENST00000623006 233 ntBASIC1.71□□□□□ -2.14
USP38Q8NB14 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.71□□□□□ -2.14
USP38Q8NB14 Y_RNA.162-201ENST00000363683 102 ntBASIC1.7□□□□□ -2.14
USP38Q8NB14 SNORA72-201ENST00000384339 132 ntBASIC1.7□□□□□ -2.14
USP38Q8NB14 RNU6-738P-201ENST00000384531 106 ntBASIC1.7□□□□□ -2.14
USP38Q8NB14 RNU6-1105P-201ENST00000384774 107 ntBASIC1.7□□□□□ -2.14
USP38Q8NB14 MIR194-1-201ENST00000384892 85 ntBASIC1.7□□□□□ -2.14
USP38Q8NB14 MTCO2P33-201ENST00000402100 465 ntBASIC1.7□□□□□ -2.14
USP38Q8NB14 RNU2-14P-201ENST00000411053 191 ntBASIC1.7□□□□□ -2.14
USP38Q8NB14 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC1.7□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 106.7 ms