Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 RNU6-1053P-201ENST00000515930 101 ntBASIC0.97□□□□□ -2.25
CCDC71LQ8N9Z2 AC131281.1-201ENST00000522984 164 ntBASIC0.97□□□□□ -2.25
CCDC71LQ8N9Z2 AC120024.3-201ENST00000603167 156 ntBASIC0.97□□□□□ -2.25
CCDC71LQ8N9Z2 HSPE1P19-201ENST00000603327 295 ntBASIC0.97□□□□□ -2.25
CCDC71LQ8N9Z2 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC0.97□□□□□ -2.25
CCDC71LQ8N9Z2 RNU6-1084P-201ENST00000362498 107 ntBASIC0.96□□□□□ -2.26
CCDC71LQ8N9Z2 RNY1P10-201ENST00000363268 113 ntBASIC0.96□□□□□ -2.26
CCDC71LQ8N9Z2 RNU6-1048P-201ENST00000364054 107 ntBASIC0.96□□□□□ -2.26
CCDC71LQ8N9Z2 Y_RNA.210-201ENST00000364161 110 ntBASIC0.96□□□□□ -2.26
CCDC71LQ8N9Z2 Y_RNA.253-201ENST00000364562 112 ntBASIC0.96□□□□□ -2.26
CCDC71LQ8N9Z2 U8.7-201ENST00000364940 136 ntBASIC0.96□□□□□ -2.26
CCDC71LQ8N9Z2 Y_RNA.380-201ENST00000365663 111 ntBASIC0.96□□□□□ -2.26
CCDC71LQ8N9Z2 RNU6-1323P-201ENST00000384025 107 ntBASIC0.96□□□□□ -2.26
CCDC71LQ8N9Z2 SNORD115-46-201ENST00000390982 71 ntBASIC0.96□□□□□ -2.26
CCDC71LQ8N9Z2 MIR891A-201ENST00000401237 79 ntBASIC0.96□□□□□ -2.26
CCDC71LQ8N9Z2 ELOCP20-201ENST00000422460 345 ntBASIC0.96□□□□□ -2.26
CCDC71LQ8N9Z2 HSPE1P25-201ENST00000455484 251 ntBASIC0.96□□□□□ -2.26
CCDC71LQ8N9Z2 AC098869.1-201ENST00000481627 292 ntBASIC0.96□□□□□ -2.26
CCDC71LQ8N9Z2 RPL23AP54-201ENST00000495129 419 ntBASIC0.96□□□□□ -2.26
CCDC71LQ8N9Z2 CYCTP-201ENST00000504253 315 ntBASIC0.96□□□□□ -2.26
CCDC71LQ8N9Z2 AC114811.1-201ENST00000507207 168 ntBASIC0.96□□□□□ -2.26
CCDC71LQ8N9Z2 RNU6-917P-201ENST00000516294 104 ntBASIC0.96□□□□□ -2.26
CCDC71LQ8N9Z2 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC0.96□□□□□ -2.26
CCDC71LQ8N9Z2 MIR4680-201ENST00000580906 66 ntBASIC0.96□□□□□ -2.26
CCDC71LQ8N9Z2 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC0.96□□□□□ -2.26
CCDC71LQ8N9Z2 AC044792.1-201ENST00000593294 196 ntBASIC0.96□□□□□ -2.26
CCDC71LQ8N9Z2 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC0.96□□□□□ -2.26
CCDC71LQ8N9Z2 AC134026.1-201ENST00000623249 2239 ntBASIC0.95□□□□□ -2.26
CCDC71LQ8N9Z2 Y_RNA.11-201ENST00000362375 109 ntBASIC0.95□□□□□ -2.26
CCDC71LQ8N9Z2 RNU4-90P-201ENST00000362773 141 ntBASIC0.95□□□□□ -2.26
CCDC71LQ8N9Z2 RNU6-806P-201ENST00000365147 105 ntBASIC0.95□□□□□ -2.26
CCDC71LQ8N9Z2 AC117470.1-201ENST00000381974 330 ntBASIC0.95□□□□□ -2.26
CCDC71LQ8N9Z2 SNORA22-201ENST00000383907 134 ntBASIC0.95□□□□□ -2.26
CCDC71LQ8N9Z2 SNORA22C-201ENST00000384614 134 ntBASIC0.95□□□□□ -2.26
CCDC71LQ8N9Z2 RNU6-121P-201ENST00000410525 99 ntBASIC0.95□□□□□ -2.26
CCDC71LQ8N9Z2 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC0.95□□□□□ -2.26
CCDC71LQ8N9Z2 SNRPGP10-201ENST00000432323 225 ntBASIC0.95□□□□□ -2.26
CCDC71LQ8N9Z2 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC0.95□□□□□ -2.26
CCDC71LQ8N9Z2 HMGN1P7-201ENST00000491722 313 ntBASIC0.95□□□□□ -2.26
CCDC71LQ8N9Z2 RNU6-496P-201ENST00000516145 99 ntBASIC0.95□□□□□ -2.26
CCDC71LQ8N9Z2 RNU7-115P-201ENST00000516433 55 ntBASIC0.95□□□□□ -2.26
CCDC71LQ8N9Z2 RNU7-116P-201ENST00000516940 62 ntBASIC0.95□□□□□ -2.26
CCDC71LQ8N9Z2 RNU6-1137P-201ENST00000517073 99 ntBASIC0.95□□□□□ -2.26
CCDC71LQ8N9Z2 AC024405.2-202ENST00000532731 184 ntBASIC0.95□□□□□ -2.26
CCDC71LQ8N9Z2 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC0.95□□□□□ -2.26
CCDC71LQ8N9Z2 DNAJC19P9-201ENST00000555084 351 ntBASIC0.95□□□□□ -2.26
CCDC71LQ8N9Z2 AC113195.1-201ENST00000579952 141 ntBASIC0.95□□□□□ -2.26
CCDC71LQ8N9Z2 AL513534.2-201ENST00000603836 250 ntBASIC0.95□□□□□ -2.26
CCDC71LQ8N9Z2 NAA50-211ENST00000630058 177 ntTSL 5 BASIC0.95□□□□□ -2.26
CCDC71LQ8N9Z2 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC0.94□□□□□ -2.26
CCDC71LQ8N9Z2 Y_RNA.19-201ENST00000362462 99 ntBASIC0.94□□□□□ -2.26
CCDC71LQ8N9Z2 Y_RNA.26-201ENST00000362539 101 ntBASIC0.94□□□□□ -2.26
CCDC71LQ8N9Z2 RNU6-833P-201ENST00000363486 107 ntBASIC0.94□□□□□ -2.26
CCDC71LQ8N9Z2 RNU6-770P-201ENST00000363929 105 ntBASIC0.94□□□□□ -2.26
CCDC71LQ8N9Z2 Y_RNA.214-201ENST00000364201 112 ntBASIC0.94□□□□□ -2.26
CCDC71LQ8N9Z2 Y_RNA.222-201ENST00000364264 102 ntBASIC0.94□□□□□ -2.26
CCDC71LQ8N9Z2 SNORA33.2-201ENST00000365413 134 ntBASIC0.94□□□□□ -2.26
CCDC71LQ8N9Z2 SNORA2.2-201ENST00000365473 135 ntBASIC0.94□□□□□ -2.26
CCDC71LQ8N9Z2 Y_RNA.418-201ENST00000384029 102 ntBASIC0.94□□□□□ -2.26
CCDC71LQ8N9Z2 Y_RNA.569-201ENST00000384749 103 ntBASIC0.94□□□□□ -2.26
CCDC71LQ8N9Z2 MIR222-201ENST00000384992 110 ntBASIC0.94□□□□□ -2.26
CCDC71LQ8N9Z2 MIR522-201ENST00000385071 87 ntBASIC0.94□□□□□ -2.26
CCDC71LQ8N9Z2 RNU6-1248P-201ENST00000391096 64 ntBASIC0.94□□□□□ -2.26
CCDC71LQ8N9Z2 RNU6-131P-201ENST00000391144 107 ntBASIC0.94□□□□□ -2.26
CCDC71LQ8N9Z2 AL451046.2-201ENST00000403074 277 ntBASIC0.94□□□□□ -2.26
CCDC71LQ8N9Z2 AC005534.2-201ENST00000431047 433 ntBASIC0.94□□□□□ -2.26
CCDC71LQ8N9Z2 MTCYBP6-201ENST00000441810 138 ntBASIC0.94□□□□□ -2.26
CCDC71LQ8N9Z2 AC009474.2-201ENST00000451383 136 ntBASIC0.94□□□□□ -2.26
CCDC71LQ8N9Z2 RPS29P29-201ENST00000456396 171 ntBASIC0.94□□□□□ -2.26
CCDC71LQ8N9Z2 AC048334.1-201ENST00000477975 159 ntBASIC0.94□□□□□ -2.26
CCDC71LQ8N9Z2 RNU6-322P-201ENST00000516010 103 ntBASIC0.94□□□□□ -2.26
CCDC71LQ8N9Z2 AC090049.2-201ENST00000550377 109 ntBASIC0.94□□□□□ -2.26
CCDC71LQ8N9Z2 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC0.94□□□□□ -2.26
CCDC71LQ8N9Z2 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC0.94□□□□□ -2.26
CCDC71LQ8N9Z2 MIR4295-201ENST00000585286 85 ntBASIC0.94□□□□□ -2.26
CCDC71LQ8N9Z2 FAM106DP-201ENST00000586416 501 ntBASIC0.94□□□□□ -2.26
CCDC71LQ8N9Z2 AL355297.3-201ENST00000604082 446 ntBASIC0.94□□□□□ -2.26
CCDC71LQ8N9Z2 MIR548AY-201ENST00000617669 107 ntBASIC0.94□□□□□ -2.26
CCDC71LQ8N9Z2 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC0.94□□□□□ -2.26
CCDC71LQ8N9Z2 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.94□□□□□ -2.26
CCDC71LQ8N9Z2 Y_RNA.64-201ENST00000362845 102 ntBASIC0.93□□□□□ -2.26
CCDC71LQ8N9Z2 Y_RNA.152-201ENST00000363578 100 ntBASIC0.93□□□□□ -2.26
CCDC71LQ8N9Z2 RNU6-801P-201ENST00000364087 105 ntBASIC0.93□□□□□ -2.26
CCDC71LQ8N9Z2 MIR215-201ENST00000384858 110 ntBASIC0.93□□□□□ -2.26
CCDC71LQ8N9Z2 MIR526A1-201ENST00000384897 85 ntBASIC0.93□□□□□ -2.26
CCDC71LQ8N9Z2 SNORD41-201ENST00000386967 70 ntBASIC0.93□□□□□ -2.26
CCDC71LQ8N9Z2 RNU2-14P-201ENST00000411053 191 ntBASIC0.93□□□□□ -2.26
CCDC71LQ8N9Z2 RPL21P38-201ENST00000418090 167 ntBASIC0.93□□□□□ -2.26
CCDC71LQ8N9Z2 LINC01399-202ENST00000458450 244 ntBASIC0.93□□□□□ -2.26
CCDC71LQ8N9Z2 MRPS35P2-201ENST00000508242 191 ntBASIC0.93□□□□□ -2.26
CCDC71LQ8N9Z2 SNORA31.2-201ENST00000516019 134 ntBASIC0.93□□□□□ -2.26
CCDC71LQ8N9Z2 RNU6-191P-201ENST00000516295 94 ntBASIC0.93□□□□□ -2.26
CCDC71LQ8N9Z2 RNU6-764P-201ENST00000516396 105 ntBASIC0.93□□□□□ -2.26
CCDC71LQ8N9Z2 SNORD45.4-201ENST00000516629 73 ntBASIC0.93□□□□□ -2.26
CCDC71LQ8N9Z2 AC136628.3-201ENST00000521868 290 ntBASIC0.93□□□□□ -2.26
CCDC71LQ8N9Z2 AP003357.1-201ENST00000604497 148 ntBASIC0.93□□□□□ -2.26
CCDC71LQ8N9Z2 AL022345.2-201ENST00000606307 135 ntBASIC0.93□□□□□ -2.26
CCDC71LQ8N9Z2 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC0.93□□□□□ -2.26
CCDC71LQ8N9Z2 GHRLOS.1-201ENST00000610995 70 ntBASIC0.93□□□□□ -2.26
CCDC71LQ8N9Z2 AC012676.2-201ENST00000619258 186 ntBASIC0.93□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 217.6 ms