Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
RNF135Q8IUD6 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
RNF135Q8IUD6 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
RNF135Q8IUD6 Y_RNA.265-201ENST00000364677 108 ntBASIC3.48□□□□□ -1.85
RNF135Q8IUD6 RNU6-690P-201ENST00000365242 106 ntBASIC3.48□□□□□ -1.85
RNF135Q8IUD6 AC104332.2-201ENST00000429959 156 ntBASIC3.48□□□□□ -1.85
RNF135Q8IUD6 RNA5SP395-201ENST00000516567 118 ntBASIC3.48□□□□□ -1.85
RNF135Q8IUD6 AC007536.1-201ENST00000533382 349 ntBASIC3.48□□□□□ -1.85
RNF135Q8IUD6 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC3.48□□□□□ -1.85
RNF135Q8IUD6 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC3.48□□□□□ -1.85
RNF135Q8IUD6 MIR3162-201ENST00000581818 82 ntBASIC3.48□□□□□ -1.85
RNF135Q8IUD6 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
RNF135Q8IUD6 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC3.48□□□□□ -1.85
RNF135Q8IUD6 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.48□□□□□ -1.85
RNF135Q8IUD6 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.48□□□□□ -1.85
RNF135Q8IUD6 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
RNF135Q8IUD6 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC3.48□□□□□ -1.85
RNF135Q8IUD6 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
RNF135Q8IUD6 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.47□□□□□ -1.85
RNF135Q8IUD6 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.47□□□□□ -1.85
RNF135Q8IUD6 Y_RNA.17-201ENST00000362433 111 ntBASIC3.47□□□□□ -1.85
RNF135Q8IUD6 MIR548D2-201ENST00000384955 97 ntBASIC3.47□□□□□ -1.85
RNF135Q8IUD6 RNU6-972P-201ENST00000391208 107 ntBASIC3.47□□□□□ -1.85
RNF135Q8IUD6 SNORA26.7-201ENST00000391288 122 ntBASIC3.47□□□□□ -1.85
RNF135Q8IUD6 MIR1262-201ENST00000408276 93 ntBASIC3.47□□□□□ -1.85
RNF135Q8IUD6 MIR1261-201ENST00000408659 82 ntBASIC3.47□□□□□ -1.85
RNF135Q8IUD6 AC092185.1-201ENST00000491371 97 ntBASIC3.47□□□□□ -1.85
RNF135Q8IUD6 AL163195.1-201ENST00000496941 348 ntBASIC3.47□□□□□ -1.85
RNF135Q8IUD6 RNU6-65P-201ENST00000516332 98 ntBASIC3.47□□□□□ -1.85
RNF135Q8IUD6 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC3.47□□□□□ -1.85
RNF135Q8IUD6 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC3.47□□□□□ -1.85
RNF135Q8IUD6 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.47□□□□□ -1.85
RNF135Q8IUD6 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.85
RNF135Q8IUD6 MIR30E-201ENST00000362104 92 ntBASIC3.46□□□□□ -1.86
RNF135Q8IUD6 SNORD68-201ENST00000363214 84 ntBASIC3.46□□□□□ -1.86
RNF135Q8IUD6 MIR1255A-201ENST00000408338 113 ntBASIC3.46□□□□□ -1.86
RNF135Q8IUD6 RNA5SP356-201ENST00000515972 94 ntBASIC3.46□□□□□ -1.86
RNF135Q8IUD6 AC021443.1-201ENST00000604478 211 ntBASIC3.46□□□□□ -1.86
RNF135Q8IUD6 MIR3202-2-201ENST00000635980 79 ntBASIC3.46□□□□□ -1.86
RNF135Q8IUD6 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.46□□□□□ -1.86
RNF135Q8IUD6 MFSD8-233ENST00000641482 4860 ntBASIC3.46□□□□□ -1.86
RNF135Q8IUD6 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.45□□□□□ -1.86
RNF135Q8IUD6 SNORD115-3-201ENST00000363100 82 ntBASIC3.45□□□□□ -1.86
RNF135Q8IUD6 Y_RNA.298-201ENST00000364960 107 ntBASIC3.45□□□□□ -1.86
RNF135Q8IUD6 RNU6-442P-201ENST00000383968 104 ntBASIC3.45□□□□□ -1.86
RNF135Q8IUD6 MIR627-201ENST00000384979 97 ntBASIC3.45□□□□□ -1.86
RNF135Q8IUD6 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
RNF135Q8IUD6 MIR548O-201ENST00000408583 114 ntBASIC3.45□□□□□ -1.86
RNF135Q8IUD6 RN7SL863P-201ENST00000462370 296 ntBASIC3.45□□□□□ -1.86
RNF135Q8IUD6 SNORA70.19-201ENST00000516717 90 ntBASIC3.45□□□□□ -1.86
RNF135Q8IUD6 SUMO2P16-201ENST00000519475 264 ntBASIC3.45□□□□□ -1.86
RNF135Q8IUD6 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.45□□□□□ -1.86
RNF135Q8IUD6 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
RNF135Q8IUD6 MIR4762-201ENST00000585261 75 ntBASIC3.45□□□□□ -1.86
RNF135Q8IUD6 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.45□□□□□ -1.86
RNF135Q8IUD6 AC006441.5-201ENST00000612680 209 ntBASIC3.45□□□□□ -1.86
RNF135Q8IUD6 AL162726.3-218ENST00000636401 95 ntBASIC3.45□□□□□ -1.86
RNF135Q8IUD6 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
RNF135Q8IUD6 RNU6-349P-201ENST00000362402 107 ntBASIC3.44□□□□□ -1.86
RNF135Q8IUD6 RNU6-862P-201ENST00000362804 105 ntBASIC3.44□□□□□ -1.86
RNF135Q8IUD6 SNORD14E-201ENST00000364009 85 ntBASIC3.44□□□□□ -1.86
RNF135Q8IUD6 U8.5-201ENST00000364528 136 ntBASIC3.44□□□□□ -1.86
RNF135Q8IUD6 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.44□□□□□ -1.86
RNF135Q8IUD6 Y_RNA.410-201ENST00000383992 113 ntBASIC3.44□□□□□ -1.86
RNF135Q8IUD6 ATP6V0E1P1-201ENST00000412537 226 ntBASIC3.44□□□□□ -1.86
RNF135Q8IUD6 RPL39P25-201ENST00000449384 154 ntBASIC3.44□□□□□ -1.86
RNF135Q8IUD6 TRBV12-1-201ENST00000479785 344 ntBASIC3.44□□□□□ -1.86
RNF135Q8IUD6 AC022137.1-201ENST00000483735 151 ntBASIC3.44□□□□□ -1.86
RNF135Q8IUD6 FAM71BP1-201ENST00000604431 523 ntBASIC3.44□□□□□ -1.86
RNF135Q8IUD6 U4atac.1-201ENST00000618345 95 ntBASIC3.44□□□□□ -1.86
RNF135Q8IUD6 CTSLP2-204ENST00000629029 392 ntBASIC3.44□□□□□ -1.86
RNF135Q8IUD6 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
RNF135Q8IUD6 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.44□□□□□ -1.86
RNF135Q8IUD6 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.44□□□□□ -1.86
RNF135Q8IUD6 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.43□□□□□ -1.86
RNF135Q8IUD6 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC3.43□□□□□ -1.86
RNF135Q8IUD6 RNU4-36P-201ENST00000364294 144 ntBASIC3.43□□□□□ -1.86
RNF135Q8IUD6 SCARNA23-201ENST00000516060 130 ntBASIC3.43□□□□□ -1.86
RNF135Q8IUD6 DEFB131E-201ENST00000532329 154 ntBASIC3.43□□□□□ -1.86
RNF135Q8IUD6 AL449363.1-201ENST00000617815 186 ntBASIC3.43□□□□□ -1.86
RNF135Q8IUD6 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
RNF135Q8IUD6 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.43□□□□□ -1.86
RNF135Q8IUD6 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.42□□□□□ -1.86
RNF135Q8IUD6 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
RNF135Q8IUD6 RNU6-1084P-201ENST00000362498 107 ntBASIC3.42□□□□□ -1.86
RNF135Q8IUD6 RNY3P2-201ENST00000362918 102 ntBASIC3.42□□□□□ -1.86
RNF135Q8IUD6 Y_RNA.221-201ENST00000364248 96 ntBASIC3.42□□□□□ -1.86
RNF135Q8IUD6 Y_RNA.290-201ENST00000364879 114 ntBASIC3.42□□□□□ -1.86
RNF135Q8IUD6 RNU6-1104P-201ENST00000384723 104 ntBASIC3.42□□□□□ -1.86
RNF135Q8IUD6 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC3.42□□□□□ -1.86
RNF135Q8IUD6 RNA5SP57-201ENST00000459463 123 ntBASIC3.42□□□□□ -1.86
RNF135Q8IUD6 AC008885.1-201ENST00000514930 301 ntBASIC3.42□□□□□ -1.86
RNF135Q8IUD6 RNU7-25P-201ENST00000516544 62 ntBASIC3.42□□□□□ -1.86
RNF135Q8IUD6 MIR2276-201ENST00000516886 89 ntBASIC3.42□□□□□ -1.86
RNF135Q8IUD6 AC004486.1-201ENST00000546846 233 ntBASIC3.42□□□□□ -1.86
RNF135Q8IUD6 GTF3AP2-201ENST00000557014 266 ntBASIC3.42□□□□□ -1.86
RNF135Q8IUD6 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
RNF135Q8IUD6 AP006437.1-201ENST00000641440 3685 ntBASIC3.41□□□□□ -1.86
RNF135Q8IUD6 RNA5SP493-201ENST00000364115 91 ntBASIC3.41□□□□□ -1.86
RNF135Q8IUD6 snoU2-30.1-201ENST00000365012 70 ntBASIC3.41□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 142.9 ms