Protein–RNA interactions for Protein: Q86WB0

ZC3HC1, Nuclear-interacting partner of ALK, humanhuman

Known RBP Predictions only

Length 502 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3HC1Q86WB0 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.69□□□□□ -2.14
ZC3HC1Q86WB0 RNA5SP481-201ENST00000516814 122 ntBASIC1.69□□□□□ -2.14
ZC3HC1Q86WB0 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.69□□□□□ -2.14
ZC3HC1Q86WB0 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
ZC3HC1Q86WB0 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
ZC3HC1Q86WB0 Y_RNA.203-201ENST00000364106 102 ntBASIC1.68□□□□□ -2.14
ZC3HC1Q86WB0 RNU4-41P-201ENST00000364426 143 ntBASIC1.68□□□□□ -2.14
ZC3HC1Q86WB0 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
ZC3HC1Q86WB0 SNORA40.18-201ENST00000391200 128 ntBASIC1.68□□□□□ -2.14
ZC3HC1Q86WB0 MIR1278-201ENST00000408753 81 ntBASIC1.68□□□□□ -2.14
ZC3HC1Q86WB0 Z98949.2-201ENST00000440996 144 ntBASIC1.68□□□□□ -2.14
ZC3HC1Q86WB0 COX6CP14-201ENST00000469580 174 ntBASIC1.68□□□□□ -2.14
ZC3HC1Q86WB0 RNU2-56P-201ENST00000516826 190 ntBASIC1.68□□□□□ -2.14
ZC3HC1Q86WB0 AC100767.1-201ENST00000528178 123 ntBASIC1.68□□□□□ -2.14
ZC3HC1Q86WB0 AC103810.8-201ENST00000607347 118 ntBASIC1.68□□□□□ -2.14
ZC3HC1Q86WB0 AC084768.2-201ENST00000622736 221 ntBASIC1.68□□□□□ -2.14
ZC3HC1Q86WB0 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
ZC3HC1Q86WB0 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.68□□□□□ -2.14
ZC3HC1Q86WB0 RNU6-661P-201ENST00000362409 107 ntBASIC1.67□□□□□ -2.14
ZC3HC1Q86WB0 Y_RNA.253-201ENST00000364562 112 ntBASIC1.67□□□□□ -2.14
ZC3HC1Q86WB0 Y_RNA.257-201ENST00000364596 102 ntBASIC1.67□□□□□ -2.14
ZC3HC1Q86WB0 Y_RNA.572-201ENST00000384757 98 ntBASIC1.67□□□□□ -2.14
ZC3HC1Q86WB0 RNU6-1031P-201ENST00000384773 107 ntBASIC1.67□□□□□ -2.14
ZC3HC1Q86WB0 MIR583-201ENST00000384846 75 ntBASIC1.67□□□□□ -2.14
ZC3HC1Q86WB0 MIR626-201ENST00000385032 94 ntBASIC1.67□□□□□ -2.14
ZC3HC1Q86WB0 MIR526A2-201ENST00000390198 65 ntBASIC1.67□□□□□ -2.14
ZC3HC1Q86WB0 RN7SKP200-201ENST00000410564 320 ntBASIC1.67□□□□□ -2.14
ZC3HC1Q86WB0 RPL31P63-201ENST00000422565 375 ntBASIC1.67□□□□□ -2.14
ZC3HC1Q86WB0 snoU13.27-201ENST00000459278 104 ntBASIC1.67□□□□□ -2.14
ZC3HC1Q86WB0 OR9P1P-201ENST00000496431 281 ntBASIC1.67□□□□□ -2.14
ZC3HC1Q86WB0 AC130289.1-201ENST00000577321 73 ntBASIC1.67□□□□□ -2.14
ZC3HC1Q86WB0 Y_RNA.802-201ENST00000614892 130 ntBASIC1.67□□□□□ -2.14
ZC3HC1Q86WB0 AL591926.4-201ENST00000616895 298 ntBASIC1.67□□□□□ -2.14
ZC3HC1Q86WB0 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
ZC3HC1Q86WB0 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.67□□□□□ -2.14
ZC3HC1Q86WB0 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
ZC3HC1Q86WB0 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
ZC3HC1Q86WB0 RNU6-1209P-201ENST00000363655 107 ntBASIC1.66□□□□□ -2.14
ZC3HC1Q86WB0 Y_RNA.200-201ENST00000364018 102 ntBASIC1.66□□□□□ -2.14
ZC3HC1Q86WB0 Y_RNA.796-201ENST00000364268 102 ntBASIC1.66□□□□□ -2.14
ZC3HC1Q86WB0 Y_RNA.262-201ENST00000364641 102 ntBASIC1.66□□□□□ -2.14
ZC3HC1Q86WB0 Y_RNA.265-201ENST00000364677 108 ntBASIC1.66□□□□□ -2.14
ZC3HC1Q86WB0 Y_RNA.799-201ENST00000364992 102 ntBASIC1.66□□□□□ -2.14
ZC3HC1Q86WB0 RNU6-950P-201ENST00000384651 107 ntBASIC1.66□□□□□ -2.14
ZC3HC1Q86WB0 U8.13-201ENST00000390842 128 ntBASIC1.66□□□□□ -2.14
ZC3HC1Q86WB0 RNU6-360P-201ENST00000390944 104 ntBASIC1.66□□□□□ -2.14
ZC3HC1Q86WB0 MIR1298-201ENST00000408783 112 ntBASIC1.66□□□□□ -2.14
ZC3HC1Q86WB0 STAG3L5P-204ENST00000443759 179 ntBASIC1.66□□□□□ -2.14
ZC3HC1Q86WB0 RNY3P16-201ENST00000516338 101 ntBASIC1.66□□□□□ -2.14
ZC3HC1Q86WB0 RNU7-28P-201ENST00000516759 62 ntBASIC1.66□□□□□ -2.14
ZC3HC1Q86WB0 SNORA44.1-201ENST00000517031 108 ntBASIC1.66□□□□□ -2.14
ZC3HC1Q86WB0 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.66□□□□□ -2.14
ZC3HC1Q86WB0 MIR4724-201ENST00000579485 89 ntBASIC1.66□□□□□ -2.14
ZC3HC1Q86WB0 AC090425.1-201ENST00000610007 140 ntBASIC1.66□□□□□ -2.14
ZC3HC1Q86WB0 Y_RNA.24-201ENST00000362508 103 ntBASIC1.65□□□□□ -2.15
ZC3HC1Q86WB0 Y_RNA.199-201ENST00000364014 102 ntBASIC1.65□□□□□ -2.15
ZC3HC1Q86WB0 RNU6-1318P-201ENST00000365389 103 ntBASIC1.65□□□□□ -2.15
ZC3HC1Q86WB0 RNU6-969P-201ENST00000383900 105 ntBASIC1.65□□□□□ -2.15
ZC3HC1Q86WB0 Y_RNA.515-201ENST00000384535 112 ntBASIC1.65□□□□□ -2.15
ZC3HC1Q86WB0 SNORA8.3-201ENST00000384679 139 ntBASIC1.65□□□□□ -2.15
ZC3HC1Q86WB0 RNA5SP482-201ENST00000391269 118 ntBASIC1.65□□□□□ -2.15
ZC3HC1Q86WB0 COX6CP10-201ENST00000416832 224 ntBASIC1.65□□□□□ -2.15
ZC3HC1Q86WB0 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.65□□□□□ -2.15
ZC3HC1Q86WB0 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.65□□□□□ -2.15
ZC3HC1Q86WB0 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC1.65□□□□□ -2.15
ZC3HC1Q86WB0 SNORA59A-201ENST00000459326 152 ntBASIC1.65□□□□□ -2.15
ZC3HC1Q86WB0 AC099513.1-201ENST00000490423 301 ntBASIC1.65□□□□□ -2.15
ZC3HC1Q86WB0 HMGN1P7-201ENST00000491722 313 ntBASIC1.65□□□□□ -2.15
ZC3HC1Q86WB0 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC1.65□□□□□ -2.15
ZC3HC1Q86WB0 RNU6-250P-201ENST00000516958 103 ntBASIC1.65□□□□□ -2.15
ZC3HC1Q86WB0 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.65□□□□□ -2.15
ZC3HC1Q86WB0 MIR4709-201ENST00000577272 72 ntBASIC1.65□□□□□ -2.15
ZC3HC1Q86WB0 MIR5688-201ENST00000580619 83 ntBASIC1.65□□□□□ -2.15
ZC3HC1Q86WB0 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.65□□□□□ -2.15
ZC3HC1Q86WB0 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
ZC3HC1Q86WB0 MIR367-201ENST00000362299 68 ntBASIC1.64□□□□□ -2.15
ZC3HC1Q86WB0 Y_RNA.83-201ENST00000363005 113 ntBASIC1.64□□□□□ -2.15
ZC3HC1Q86WB0 Y_RNA.274-201ENST00000364714 101 ntBASIC1.64□□□□□ -2.15
ZC3HC1Q86WB0 RNA5SP363-201ENST00000365072 115 ntBASIC1.64□□□□□ -2.15
ZC3HC1Q86WB0 RNU6-439P-201ENST00000384188 106 ntBASIC1.64□□□□□ -2.15
ZC3HC1Q86WB0 RNU6-847P-201ENST00000411115 108 ntBASIC1.64□□□□□ -2.15
ZC3HC1Q86WB0 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.64□□□□□ -2.15
ZC3HC1Q86WB0 RNU7-34P-201ENST00000459394 64 ntBASIC1.64□□□□□ -2.15
ZC3HC1Q86WB0 RPL23AP91-201ENST00000569211 455 ntBASIC1.64□□□□□ -2.15
ZC3HC1Q86WB0 MIR3198-2-201ENST00000577868 80 ntBASIC1.64□□□□□ -2.15
ZC3HC1Q86WB0 SNORA28-201ENST00000606769 126 ntBASIC1.64□□□□□ -2.15
ZC3HC1Q86WB0 AC021506.2-201ENST00000612354 169 ntBASIC1.64□□□□□ -2.15
ZC3HC1Q86WB0 MIRLET7C-201ENST00000362160 84 ntBASIC1.63□□□□□ -2.15
ZC3HC1Q86WB0 MIR126-201ENST00000362291 85 ntBASIC1.63□□□□□ -2.15
ZC3HC1Q86WB0 snoU2_19.4-201ENST00000364329 80 ntBASIC1.63□□□□□ -2.15
ZC3HC1Q86WB0 Y_RNA.308-201ENST00000365043 101 ntBASIC1.63□□□□□ -2.15
ZC3HC1Q86WB0 RNA5SP126-201ENST00000365092 109 ntBASIC1.63□□□□□ -2.15
ZC3HC1Q86WB0 MIR522-201ENST00000385071 87 ntBASIC1.63□□□□□ -2.15
ZC3HC1Q86WB0 AL034345.1-201ENST00000407768 123 ntBASIC1.63□□□□□ -2.15
ZC3HC1Q86WB0 SNRPGP10-201ENST00000432323 225 ntBASIC1.63□□□□□ -2.15
ZC3HC1Q86WB0 RNU6-794P-201ENST00000517261 64 ntBASIC1.63□□□□□ -2.15
ZC3HC1Q86WB0 CBX3P4-201ENST00000538909 354 ntBASIC1.63□□□□□ -2.15
ZC3HC1Q86WB0 MIR4255-201ENST00000579351 72 ntBASIC1.63□□□□□ -2.15
ZC3HC1Q86WB0 MIR2681-201ENST00000581814 105 ntBASIC1.63□□□□□ -2.15
ZC3HC1Q86WB0 MIR4762-201ENST00000585261 75 ntBASIC1.63□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 115.9 ms