Protein–RNA interactions for Protein: Q6ZNE9

RUFY4, RUN and FYVE domain-containing protein 4, humanhuman

Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUFY4Q6ZNE9 MIR4769-201ENST00000584126 77 ntBASIC2.76□□□□□ -1.97
RUFY4Q6ZNE9 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.76□□□□□ -1.97
RUFY4Q6ZNE9 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
RUFY4Q6ZNE9 RNU6-1019P-201ENST00000364424 107 ntBASIC2.75□□□□□ -1.97
RUFY4Q6ZNE9 RNU6-768P-201ENST00000384683 107 ntBASIC2.75□□□□□ -1.97
RUFY4Q6ZNE9 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.75□□□□□ -1.97
RUFY4Q6ZNE9 RNU4-53P-201ENST00000410828 140 ntBASIC2.75□□□□□ -1.97
RUFY4Q6ZNE9 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
RUFY4Q6ZNE9 SNRPGP10-201ENST00000432323 225 ntBASIC2.75□□□□□ -1.97
RUFY4Q6ZNE9 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.75□□□□□ -1.97
RUFY4Q6ZNE9 MIR5092-201ENST00000583139 88 ntBASIC2.75□□□□□ -1.97
RUFY4Q6ZNE9 AC069114.2-201ENST00000604699 304 ntBASIC2.75□□□□□ -1.97
RUFY4Q6ZNE9 AC022202.1-201ENST00000613515 211 ntBASIC2.75□□□□□ -1.97
RUFY4Q6ZNE9 Pinc.1-201ENST00000616452 154 ntBASIC2.75□□□□□ -1.97
RUFY4Q6ZNE9 AC022513.1-201ENST00000624512 117 ntBASIC2.75□□□□□ -1.97
RUFY4Q6ZNE9 MIR3658-201ENST00000636291 56 ntBASIC2.75□□□□□ -1.97
RUFY4Q6ZNE9 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.75□□□□□ -1.97
RUFY4Q6ZNE9 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.75□□□□□ -1.97
RUFY4Q6ZNE9 SNORD115-3-201ENST00000363100 82 ntBASIC2.74□□□□□ -1.97
RUFY4Q6ZNE9 Y_RNA.634-201ENST00000364811 113 ntBASIC2.74□□□□□ -1.97
RUFY4Q6ZNE9 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.74□□□□□ -1.97
RUFY4Q6ZNE9 Z98742.3-201ENST00000418637 326 ntBASIC2.74□□□□□ -1.97
RUFY4Q6ZNE9 AL606753.1-201ENST00000427435 87 ntBASIC2.74□□□□□ -1.97
RUFY4Q6ZNE9 FTH1P12-201ENST00000432137 551 ntBASIC2.74□□□□□ -1.97
RUFY4Q6ZNE9 RNU6-426P-201ENST00000516464 97 ntBASIC2.74□□□□□ -1.97
RUFY4Q6ZNE9 RNU2-56P-201ENST00000516826 190 ntBASIC2.74□□□□□ -1.97
RUFY4Q6ZNE9 AC091895.1-201ENST00000624494 256 ntBASIC2.74□□□□□ -1.97
RUFY4Q6ZNE9 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
RUFY4Q6ZNE9 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.74□□□□□ -1.97
RUFY4Q6ZNE9 SNORA1B-201ENST00000362535 133 ntBASIC2.73□□□□□ -1.97
RUFY4Q6ZNE9 RNU6-978P-201ENST00000364371 103 ntBASIC2.73□□□□□ -1.97
RUFY4Q6ZNE9 SNORA25.7-201ENST00000364375 127 ntBASIC2.73□□□□□ -1.97
RUFY4Q6ZNE9 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
RUFY4Q6ZNE9 AL359511.1-201ENST00000402970 211 ntBASIC2.73□□□□□ -1.97
RUFY4Q6ZNE9 BX510359.4-201ENST00000423750 193 ntBASIC2.73□□□□□ -1.97
RUFY4Q6ZNE9 NDUFA4P2-201ENST00000489989 244 ntBASIC2.73□□□□□ -1.97
RUFY4Q6ZNE9 IGKV3-31-201ENST00000523109 329 ntBASIC2.73□□□□□ -1.97
RUFY4Q6ZNE9 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC2.73□□□□□ -1.97
RUFY4Q6ZNE9 MIR4762-201ENST00000585261 75 ntBASIC2.73□□□□□ -1.97
RUFY4Q6ZNE9 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.73□□□□□ -1.97
RUFY4Q6ZNE9 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.73□□□□□ -1.97
RUFY4Q6ZNE9 AC010332.2-201ENST00000613083 1904 ntBASIC2.73□□□□□ -1.97
RUFY4Q6ZNE9 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
RUFY4Q6ZNE9 RNU6-818P-201ENST00000364837 108 ntBASIC2.72□□□□□ -1.97
RUFY4Q6ZNE9 SNORA40-201ENST00000388090 126 ntBASIC2.72□□□□□ -1.97
RUFY4Q6ZNE9 Y_RNA.586-201ENST00000391146 98 ntBASIC2.72□□□□□ -1.97
RUFY4Q6ZNE9 RNA5SP482-201ENST00000391269 118 ntBASIC2.72□□□□□ -1.97
RUFY4Q6ZNE9 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC2.72□□□□□ -1.97
RUFY4Q6ZNE9 AC234781.5-201ENST00000508429 271 ntBASIC2.72□□□□□ -1.97
RUFY4Q6ZNE9 RNU6-365P-201ENST00000517113 106 ntBASIC2.72□□□□□ -1.97
RUFY4Q6ZNE9 RNA5SP402-201ENST00000517148 110 ntBASIC2.72□□□□□ -1.97
RUFY4Q6ZNE9 MIR4648-201ENST00000580107 72 ntBASIC2.72□□□□□ -1.97
RUFY4Q6ZNE9 MIR4658-201ENST00000584344 65 ntBASIC2.72□□□□□ -1.97
RUFY4Q6ZNE9 AC046143.2-201ENST00000609789 160 ntBASIC2.72□□□□□ -1.97
RUFY4Q6ZNE9 ZNF702P-202ENST00000434269 1966 ntBASIC2.72□□□□□ -1.97
RUFY4Q6ZNE9 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.71□□□□□ -1.98
RUFY4Q6ZNE9 MIR126-201ENST00000362291 85 ntBASIC2.71□□□□□ -1.98
RUFY4Q6ZNE9 MIR518A2-201ENST00000384966 87 ntBASIC2.71□□□□□ -1.98
RUFY4Q6ZNE9 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
RUFY4Q6ZNE9 RNU11-3P-201ENST00000391111 133 ntBASIC2.71□□□□□ -1.98
RUFY4Q6ZNE9 AL356320.1-201ENST00000429616 163 ntBASIC2.71□□□□□ -1.98
RUFY4Q6ZNE9 RNU7-197P-201ENST00000458836 62 ntBASIC2.71□□□□□ -1.98
RUFY4Q6ZNE9 SNORA25.12-201ENST00000516202 82 ntBASIC2.71□□□□□ -1.98
RUFY4Q6ZNE9 AC008507.4-201ENST00000585464 127 ntBASIC2.71□□□□□ -1.98
RUFY4Q6ZNE9 AC120024.3-201ENST00000603167 156 ntBASIC2.71□□□□□ -1.98
RUFY4Q6ZNE9 AC022217.4-201ENST00000604389 163 ntBASIC2.71□□□□□ -1.98
RUFY4Q6ZNE9 AL591926.4-201ENST00000616895 298 ntBASIC2.71□□□□□ -1.98
RUFY4Q6ZNE9 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
RUFY4Q6ZNE9 AC007336.1-201ENST00000576365 3828 ntBASIC2.7□□□□□ -1.98
RUFY4Q6ZNE9 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
RUFY4Q6ZNE9 U8.5-201ENST00000364528 136 ntBASIC2.7□□□□□ -1.98
RUFY4Q6ZNE9 RNU6-1117P-201ENST00000384525 104 ntBASIC2.7□□□□□ -1.98
RUFY4Q6ZNE9 RNU6-959P-201ENST00000384671 107 ntBASIC2.7□□□□□ -1.98
RUFY4Q6ZNE9 MIR522-201ENST00000385071 87 ntBASIC2.7□□□□□ -1.98
RUFY4Q6ZNE9 HMGN2P39-201ENST00000398005 273 ntBASIC2.7□□□□□ -1.98
RUFY4Q6ZNE9 MIR1283-2-201ENST00000408621 87 ntBASIC2.7□□□□□ -1.98
RUFY4Q6ZNE9 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.7□□□□□ -1.98
RUFY4Q6ZNE9 AC245047.3-201ENST00000429428 127 ntBASIC2.7□□□□□ -1.98
RUFY4Q6ZNE9 RNU6-504P-201ENST00000516568 104 ntBASIC2.7□□□□□ -1.98
RUFY4Q6ZNE9 AC084364.2-201ENST00000546924 395 ntBASIC2.7□□□□□ -1.98
RUFY4Q6ZNE9 DEFB122-202ENST00000569013 197 ntBASIC2.7□□□□□ -1.98
RUFY4Q6ZNE9 AP001340.1-201ENST00000624405 217 ntBASIC2.7□□□□□ -1.98
RUFY4Q6ZNE9 FO624990.1-201ENST00000636373 85 ntBASIC2.7□□□□□ -1.98
RUFY4Q6ZNE9 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.69□□□□□ -1.98
RUFY4Q6ZNE9 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
RUFY4Q6ZNE9 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
RUFY4Q6ZNE9 RNA5SP456-201ENST00000364002 114 ntBASIC2.69□□□□□ -1.98
RUFY4Q6ZNE9 RNU6-950P-201ENST00000384651 107 ntBASIC2.69□□□□□ -1.98
RUFY4Q6ZNE9 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
RUFY4Q6ZNE9 RNU6-257P-201ENST00000410238 98 ntBASIC2.69□□□□□ -1.98
RUFY4Q6ZNE9 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC2.69□□□□□ -1.98
RUFY4Q6ZNE9 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC2.69□□□□□ -1.98
RUFY4Q6ZNE9 AC103810.6-201ENST00000606708 136 ntBASIC2.69□□□□□ -1.98
RUFY4Q6ZNE9 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC2.68□□□□□ -1.98
RUFY4Q6ZNE9 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.68□□□□□ -1.98
RUFY4Q6ZNE9 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
RUFY4Q6ZNE9 AC245060.5-201ENST00000610778 3293 ntBASIC2.68□□□□□ -1.98
RUFY4Q6ZNE9 SNORD24-201ENST00000383884 75 ntBASIC2.68□□□□□ -1.98
RUFY4Q6ZNE9 Y_RNA.486-201ENST00000384398 107 ntBASIC2.68□□□□□ -1.98
RUFY4Q6ZNE9 RNU6-1081P-201ENST00000384537 107 ntBASIC2.68□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 193.2 ms