Protein–RNA interactions for Protein: Q6NX49

ZNF544, Zinc finger protein 544, humanhuman

Predictions only

Length 715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF544Q6NX49 RNU6-855P-201ENST00000410395 104 ntBASIC1.16□□□□□ -2.22
ZNF544Q6NX49 COX6CP10-201ENST00000416832 224 ntBASIC1.16□□□□□ -2.22
ZNF544Q6NX49 RNU6-635P-201ENST00000516651 102 ntBASIC1.16□□□□□ -2.22
ZNF544Q6NX49 RNU7-116P-201ENST00000516940 62 ntBASIC1.16□□□□□ -2.22
ZNF544Q6NX49 RNU2-31P-201ENST00000516954 155 ntBASIC1.16□□□□□ -2.22
ZNF544Q6NX49 AC136628.3-201ENST00000521868 290 ntBASIC1.16□□□□□ -2.22
ZNF544Q6NX49 AP003357.1-201ENST00000604497 148 ntBASIC1.16□□□□□ -2.22
ZNF544Q6NX49 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.16□□□□□ -2.22
ZNF544Q6NX49 MIR6078-201ENST00000611069 100 ntBASIC1.16□□□□□ -2.22
ZNF544Q6NX49 AC021506.2-201ENST00000612354 169 ntBASIC1.16□□□□□ -2.22
ZNF544Q6NX49 AP001282.2-201ENST00000616149 309 ntBASIC1.16□□□□□ -2.22
ZNF544Q6NX49 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
ZNF544Q6NX49 UBE2WP1-201ENST00000362030 340 ntBASIC1.15□□□□□ -2.23
ZNF544Q6NX49 MIR335-201ENST00000362173 94 ntBASIC1.15□□□□□ -2.23
ZNF544Q6NX49 MIR302D-201ENST00000362275 68 ntBASIC1.15□□□□□ -2.23
ZNF544Q6NX49 SNORA1B-201ENST00000362535 133 ntBASIC1.15□□□□□ -2.23
ZNF544Q6NX49 RNU6-414P-201ENST00000363705 104 ntBASIC1.15□□□□□ -2.23
ZNF544Q6NX49 RNU6-801P-201ENST00000364087 105 ntBASIC1.15□□□□□ -2.23
ZNF544Q6NX49 RNU6-472P-201ENST00000384299 107 ntBASIC1.15□□□□□ -2.23
ZNF544Q6NX49 RNU6-939P-201ENST00000384634 107 ntBASIC1.15□□□□□ -2.23
ZNF544Q6NX49 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.15□□□□□ -2.23
ZNF544Q6NX49 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC1.15□□□□□ -2.23
ZNF544Q6NX49 U8.19-201ENST00000459095 133 ntBASIC1.15□□□□□ -2.23
ZNF544Q6NX49 MTCO2P24-201ENST00000515611 426 ntBASIC1.15□□□□□ -2.23
ZNF544Q6NX49 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC1.15□□□□□ -2.23
ZNF544Q6NX49 SNORA28-201ENST00000606769 126 ntBASIC1.15□□□□□ -2.23
ZNF544Q6NX49 AL513423.1-201ENST00000621695 132 ntBASIC1.15□□□□□ -2.23
ZNF544Q6NX49 AC095038.3-201ENST00000634439 195 ntBASIC1.15□□□□□ -2.23
ZNF544Q6NX49 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.15□□□□□ -2.23
ZNF544Q6NX49 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
ZNF544Q6NX49 RNU6-1123P-201ENST00000362347 106 ntBASIC1.14□□□□□ -2.23
ZNF544Q6NX49 Y_RNA.176-201ENST00000363815 109 ntBASIC1.14□□□□□ -2.23
ZNF544Q6NX49 Y_RNA.376-201ENST00000365638 108 ntBASIC1.14□□□□□ -2.23
ZNF544Q6NX49 SNORA72.4-201ENST00000384174 132 ntBASIC1.14□□□□□ -2.23
ZNF544Q6NX49 Y_RNA.459-201ENST00000384251 102 ntBASIC1.14□□□□□ -2.23
ZNF544Q6NX49 RNU6-713P-201ENST00000384761 107 ntBASIC1.14□□□□□ -2.23
ZNF544Q6NX49 SNORA53-201ENST00000391141 249 ntBASIC1.14□□□□□ -2.23
ZNF544Q6NX49 RNA5SP482-201ENST00000391269 118 ntBASIC1.14□□□□□ -2.23
ZNF544Q6NX49 AL034345.1-201ENST00000407768 123 ntBASIC1.14□□□□□ -2.23
ZNF544Q6NX49 MIR1285-1-201ENST00000408593 84 ntBASIC1.14□□□□□ -2.23
ZNF544Q6NX49 MTCYBP9-201ENST00000431021 303 ntBASIC1.14□□□□□ -2.23
ZNF544Q6NX49 AC104332.1-201ENST00000440471 797 ntBASIC1.14□□□□□ -2.23
ZNF544Q6NX49 RNU1-123P-201ENST00000458950 160 ntBASIC1.14□□□□□ -2.23
ZNF544Q6NX49 OR9P1P-201ENST00000496431 281 ntBASIC1.14□□□□□ -2.23
ZNF544Q6NX49 SERF1AP1-201ENST00000514575 187 ntBASIC1.14□□□□□ -2.23
ZNF544Q6NX49 RNU6-1338P-201ENST00000516328 91 ntBASIC1.14□□□□□ -2.23
ZNF544Q6NX49 RNU6-1291P-201ENST00000516591 104 ntBASIC1.14□□□□□ -2.23
ZNF544Q6NX49 AC090821.2-201ENST00000523552 176 ntBASIC1.14□□□□□ -2.23
ZNF544Q6NX49 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.14□□□□□ -2.23
ZNF544Q6NX49 AC127455.1-201ENST00000565496 145 ntBASIC1.14□□□□□ -2.23
ZNF544Q6NX49 MIR4762-201ENST00000585261 75 ntBASIC1.14□□□□□ -2.23
ZNF544Q6NX49 AL442644.1-201ENST00000454390 3105 ntBASIC1.13□□□□□ -2.23
ZNF544Q6NX49 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.13□□□□□ -2.23
ZNF544Q6NX49 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
ZNF544Q6NX49 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC1.13□□□□□ -2.23
ZNF544Q6NX49 Y_RNA.16-201ENST00000362421 102 ntBASIC1.13□□□□□ -2.23
ZNF544Q6NX49 RNU6-1309P-201ENST00000363305 108 ntBASIC1.13□□□□□ -2.23
ZNF544Q6NX49 Y_RNA.149-201ENST00000363558 117 ntBASIC1.13□□□□□ -2.23
ZNF544Q6NX49 Y_RNA.217-201ENST00000364214 105 ntBASIC1.13□□□□□ -2.23
ZNF544Q6NX49 U8.5-201ENST00000364528 136 ntBASIC1.13□□□□□ -2.23
ZNF544Q6NX49 MT-TW-201ENST00000387382 68 ntBASIC1.13□□□□□ -2.23
ZNF544Q6NX49 SNORA40.6-201ENST00000391153 128 ntBASIC1.13□□□□□ -2.23
ZNF544Q6NX49 MIR1267-201ENST00000408723 78 ntBASIC1.13□□□□□ -2.23
ZNF544Q6NX49 PGBD4P5-201ENST00000445958 426 ntBASIC1.13□□□□□ -2.23
ZNF544Q6NX49 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.13□□□□□ -2.23
ZNF544Q6NX49 RNU7-34P-201ENST00000459394 64 ntBASIC1.13□□□□□ -2.23
ZNF544Q6NX49 Y_RNA.641-201ENST00000459414 105 ntBASIC1.13□□□□□ -2.23
ZNF544Q6NX49 TRBVB-201ENST00000477100 408 ntBASIC1.13□□□□□ -2.23
ZNF544Q6NX49 RNU7-115P-201ENST00000516433 55 ntBASIC1.13□□□□□ -2.23
ZNF544Q6NX49 SNORA27.4-201ENST00000516650 95 ntBASIC1.13□□□□□ -2.23
ZNF544Q6NX49 RNU2-56P-201ENST00000516826 190 ntBASIC1.13□□□□□ -2.23
ZNF544Q6NX49 AC011604.1-201ENST00000545978 196 ntBASIC1.13□□□□□ -2.23
ZNF544Q6NX49 AC015688.6-201ENST00000577737 104 ntBASIC1.13□□□□□ -2.23
ZNF544Q6NX49 MIR3660-201ENST00000584845 100 ntBASIC1.13□□□□□ -2.23
ZNF544Q6NX49 AC073349.3-201ENST00000617616 186 ntBASIC1.13□□□□□ -2.23
ZNF544Q6NX49 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC1.13□□□□□ -2.23
ZNF544Q6NX49 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.13□□□□□ -2.23
ZNF544Q6NX49 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.12□□□□□ -2.23
ZNF544Q6NX49 MIRLET7C-201ENST00000362160 84 ntBASIC1.12□□□□□ -2.23
ZNF544Q6NX49 SNORA25.1-201ENST00000362326 128 ntBASIC1.12□□□□□ -2.23
ZNF544Q6NX49 Y_RNA.47-201ENST00000362697 108 ntBASIC1.12□□□□□ -2.23
ZNF544Q6NX49 RNU6-1272P-201ENST00000362776 107 ntBASIC1.12□□□□□ -2.23
ZNF544Q6NX49 RNU6-674P-201ENST00000363831 107 ntBASIC1.12□□□□□ -2.23
ZNF544Q6NX49 Y_RNA.267-201ENST00000364679 109 ntBASIC1.12□□□□□ -2.23
ZNF544Q6NX49 SNORA25.9-201ENST00000365087 128 ntBASIC1.12□□□□□ -2.23
ZNF544Q6NX49 RNU6-424P-201ENST00000384367 105 ntBASIC1.12□□□□□ -2.23
ZNF544Q6NX49 Y_RNA.512-201ENST00000384518 102 ntBASIC1.12□□□□□ -2.23
ZNF544Q6NX49 RNU6-136P-201ENST00000384663 107 ntBASIC1.12□□□□□ -2.23
ZNF544Q6NX49 SNORA26.5-201ENST00000391215 123 ntBASIC1.12□□□□□ -2.23
ZNF544Q6NX49 RNU6ATAC19P-201ENST00000408096 110 ntBASIC1.12□□□□□ -2.23
ZNF544Q6NX49 RNU2-14P-201ENST00000411053 191 ntBASIC1.12□□□□□ -2.23
ZNF544Q6NX49 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.12□□□□□ -2.23
ZNF544Q6NX49 STAG3L5P-204ENST00000443759 179 ntBASIC1.12□□□□□ -2.23
ZNF544Q6NX49 AL118496.2-201ENST00000448300 230 ntBASIC1.12□□□□□ -2.23
ZNF544Q6NX49 AL049830.1-201ENST00000468034 425 ntBASIC1.12□□□□□ -2.23
ZNF544Q6NX49 AC091959.1-201ENST00000495857 238 ntBASIC1.12□□□□□ -2.23
ZNF544Q6NX49 AC024405.2-202ENST00000532731 184 ntBASIC1.12□□□□□ -2.23
ZNF544Q6NX49 POLR3GP1-201ENST00000594073 261 ntBASIC1.12□□□□□ -2.23
ZNF544Q6NX49 AC037487.3-201ENST00000606668 112 ntBASIC1.12□□□□□ -2.23
ZNF544Q6NX49 MIR548AY-201ENST00000617669 107 ntBASIC1.12□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 140.9 ms