Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.91
RNF43Q68DV7 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC3.09□□□□□ -1.91
RNF43Q68DV7 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.91
RNF43Q68DV7 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
RNF43Q68DV7 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
RNF43Q68DV7 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.92
RNF43Q68DV7 RNU6-1124P-201ENST00000384169 107 ntBASIC3.08□□□□□ -1.92
RNF43Q68DV7 RNU6-1186P-201ENST00000410429 97 ntBASIC3.08□□□□□ -1.92
RNF43Q68DV7 RNA5SP274-201ENST00000410484 108 ntBASIC3.08□□□□□ -1.92
RNF43Q68DV7 RNU6-893P-201ENST00000458841 100 ntBASIC3.08□□□□□ -1.92
RNF43Q68DV7 TRBV12-1-201ENST00000479785 344 ntBASIC3.08□□□□□ -1.92
RNF43Q68DV7 RN7SL633P-201ENST00000488974 297 ntBASIC3.08□□□□□ -1.92
RNF43Q68DV7 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC3.08□□□□□ -1.92
RNF43Q68DV7 RNU6-586P-201ENST00000517265 104 ntBASIC3.08□□□□□ -1.92
RNF43Q68DV7 AC004486.1-201ENST00000546846 233 ntBASIC3.08□□□□□ -1.92
RNF43Q68DV7 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
RNF43Q68DV7 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.08□□□□□ -1.92
RNF43Q68DV7 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
RNF43Q68DV7 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
RNF43Q68DV7 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
RNF43Q68DV7 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.07□□□□□ -1.92
RNF43Q68DV7 Y_RNA.17-201ENST00000362433 111 ntBASIC3.07□□□□□ -1.92
RNF43Q68DV7 RNU1-72P-201ENST00000362976 153 ntBASIC3.07□□□□□ -1.92
RNF43Q68DV7 U8.17-201ENST00000391292 132 ntBASIC3.07□□□□□ -1.92
RNF43Q68DV7 RPS29P6-201ENST00000438196 145 ntBASIC3.07□□□□□ -1.92
RNF43Q68DV7 AC105272.1-201ENST00000438604 198 ntBASIC3.07□□□□□ -1.92
RNF43Q68DV7 AL445687.1-201ENST00000439946 251 ntBASIC3.07□□□□□ -1.92
RNF43Q68DV7 RPL39P25-201ENST00000449384 154 ntBASIC3.07□□□□□ -1.92
RNF43Q68DV7 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC3.07□□□□□ -1.92
RNF43Q68DV7 RNA5SP490-201ENST00000517141 136 ntBASIC3.07□□□□□ -1.92
RNF43Q68DV7 RNU6-711P-201ENST00000517255 106 ntBASIC3.07□□□□□ -1.92
RNF43Q68DV7 AC022523.2-201ENST00000561045 150 ntBASIC3.07□□□□□ -1.92
RNF43Q68DV7 U2.20-201ENST00000613956 192 ntBASIC3.07□□□□□ -1.92
RNF43Q68DV7 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC3.07□□□□□ -1.92
RNF43Q68DV7 AC007318.2-201ENST00000620999 243 ntBASIC3.07□□□□□ -1.92
RNF43Q68DV7 AL162726.3-218ENST00000636401 95 ntBASIC3.07□□□□□ -1.92
RNF43Q68DV7 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC3.07□□□□□ -1.92
RNF43Q68DV7 AC092435.3-201ENST00000565538 3654 ntBASIC3.06□□□□□ -1.92
RNF43Q68DV7 RNU6-851P-201ENST00000384565 107 ntBASIC3.06□□□□□ -1.92
RNF43Q68DV7 MIR767-201ENST00000390228 109 ntBASIC3.06□□□□□ -1.92
RNF43Q68DV7 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC3.06□□□□□ -1.92
RNF43Q68DV7 AL135938.1-201ENST00000443141 297 ntBASIC3.06□□□□□ -1.92
RNF43Q68DV7 RNU7-164P-201ENST00000459221 62 ntBASIC3.06□□□□□ -1.92
RNF43Q68DV7 SNORD59.2-201ENST00000516873 68 ntBASIC3.06□□□□□ -1.92
RNF43Q68DV7 DEFB131E-201ENST00000532329 154 ntBASIC3.06□□□□□ -1.92
RNF43Q68DV7 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.06□□□□□ -1.92
RNF43Q68DV7 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC3.05□□□□□ -1.92
RNF43Q68DV7 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.05□□□□□ -1.92
RNF43Q68DV7 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC3.05□□□□□ -1.92
RNF43Q68DV7 MIR126-201ENST00000362291 85 ntBASIC3.05□□□□□ -1.92
RNF43Q68DV7 RNY3P2-201ENST00000362918 102 ntBASIC3.05□□□□□ -1.92
RNF43Q68DV7 RNU1-96P-201ENST00000364163 162 ntBASIC3.05□□□□□ -1.92
RNF43Q68DV7 RNU6-1189P-201ENST00000383958 107 ntBASIC3.05□□□□□ -1.92
RNF43Q68DV7 Y_RNA.466-201ENST00000384294 113 ntBASIC3.05□□□□□ -1.92
RNF43Q68DV7 RNU6-972P-201ENST00000391208 107 ntBASIC3.05□□□□□ -1.92
RNF43Q68DV7 ATP6V0E1P1-201ENST00000412537 226 ntBASIC3.05□□□□□ -1.92
RNF43Q68DV7 HMGN2P34-201ENST00000437647 269 ntBASIC3.05□□□□□ -1.92
RNF43Q68DV7 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC3.05□□□□□ -1.92
RNF43Q68DV7 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC3.05□□□□□ -1.92
RNF43Q68DV7 RNU7-123P-201ENST00000515911 60 ntBASIC3.05□□□□□ -1.92
RNF43Q68DV7 SCARNA23-201ENST00000516060 130 ntBASIC3.05□□□□□ -1.92
RNF43Q68DV7 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC3.05□□□□□ -1.92
RNF43Q68DV7 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC3.05□□□□□ -1.92
RNF43Q68DV7 ZNF271P-202ENST00000465539 1970 ntBASIC3.05□□□□□ -1.92
RNF43Q68DV7 ZNF720P1-201ENST00000562403 1939 ntBASIC3.05□□□□□ -1.92
RNF43Q68DV7 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.05□□□□□ -1.92
RNF43Q68DV7 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
RNF43Q68DV7 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC3.04□□□□□ -1.92
RNF43Q68DV7 RNU4-36P-201ENST00000364294 144 ntBASIC3.04□□□□□ -1.92
RNF43Q68DV7 Y_RNA.290-201ENST00000364879 114 ntBASIC3.04□□□□□ -1.92
RNF43Q68DV7 Y_RNA.410-201ENST00000383992 113 ntBASIC3.04□□□□□ -1.92
RNF43Q68DV7 RNU6-816P-201ENST00000390914 107 ntBASIC3.04□□□□□ -1.92
RNF43Q68DV7 RNU6-1268P-201ENST00000391214 107 ntBASIC3.04□□□□□ -1.92
RNF43Q68DV7 RNU6-1239P-201ENST00000391310 107 ntBASIC3.04□□□□□ -1.92
RNF43Q68DV7 MIR1255A-201ENST00000408338 113 ntBASIC3.04□□□□□ -1.92
RNF43Q68DV7 AC009238.1-201ENST00000442165 424 ntBASIC3.04□□□□□ -1.92
RNF43Q68DV7 AC009237.6-201ENST00000446969 424 ntBASIC3.04□□□□□ -1.92
RNF43Q68DV7 AL031183.1-201ENST00000457667 207 ntBASIC3.04□□□□□ -1.92
RNF43Q68DV7 RNA5SP57-201ENST00000459463 123 ntBASIC3.04□□□□□ -1.92
RNF43Q68DV7 SNORA4.4-201ENST00000515921 135 ntBASIC3.04□□□□□ -1.92
RNF43Q68DV7 AC091544.4-201ENST00000555268 342 ntBASIC3.04□□□□□ -1.92
RNF43Q68DV7 MIR3163-201ENST00000581592 73 ntBASIC3.04□□□□□ -1.92
RNF43Q68DV7 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.04□□□□□ -1.92
RNF43Q68DV7 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC3.04□□□□□ -1.92
RNF43Q68DV7 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
RNF43Q68DV7 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC3.04□□□□□ -1.92
RNF43Q68DV7 GABRG2-229ENST00000641017 3628 ntBASIC3.04□□□□□ -1.92
RNF43Q68DV7 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
RNF43Q68DV7 AC062016.1-201ENST00000355719 319 ntBASIC3.03□□□□□ -1.92
RNF43Q68DV7 RNU6-743P-201ENST00000364151 106 ntBASIC3.03□□□□□ -1.92
RNF43Q68DV7 Y_RNA.242-201ENST00000364473 110 ntBASIC3.03□□□□□ -1.92
RNF43Q68DV7 Y_RNA.267-201ENST00000364679 109 ntBASIC3.03□□□□□ -1.92
RNF43Q68DV7 U8.9-201ENST00000365667 134 ntBASIC3.03□□□□□ -1.92
RNF43Q68DV7 RNU6-813P-201ENST00000384691 107 ntBASIC3.03□□□□□ -1.92
RNF43Q68DV7 MIR548O-201ENST00000408583 114 ntBASIC3.03□□□□□ -1.92
RNF43Q68DV7 AC060773.1-201ENST00000421698 310 ntBASIC3.03□□□□□ -1.92
RNF43Q68DV7 RPS15AP28-201ENST00000435088 386 ntBASIC3.03□□□□□ -1.92
RNF43Q68DV7 AC022137.1-201ENST00000483735 151 ntBASIC3.03□□□□□ -1.92
RNF43Q68DV7 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC3.03□□□□□ -1.92
RNF43Q68DV7 RNU6-237P-201ENST00000515985 71 ntBASIC3.03□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 171.4 ms