Protein–RNA interactions for Protein: Q5TAT6

COL13A1, Collagen alpha-1(XIII) chain, humanhuman

Predicted RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1Q5TAT6 MIR515-1-201ENST00000384884 83 ntBASIC3.22□□□□□ -1.89
COL13A1Q5TAT6 AC007064.1-201ENST00000412238 351 ntBASIC3.22□□□□□ -1.89
COL13A1Q5TAT6 SNRPGP13-201ENST00000442212 177 ntBASIC3.22□□□□□ -1.89
COL13A1Q5TAT6 IGHVIII-67-2-201ENST00000519849 88 ntBASIC3.22□□□□□ -1.89
COL13A1Q5TAT6 AL355297.2-201ENST00000604792 129 ntBASIC3.22□□□□□ -1.89
COL13A1Q5TAT6 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
COL13A1Q5TAT6 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.22□□□□□ -1.89
COL13A1Q5TAT6 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC3.22□□□□□ -1.89
COL13A1Q5TAT6 AC093010.3-201ENST00000570269 15214 ntBASIC3.22□□□□□ -1.89
COL13A1Q5TAT6 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.22□□□□□ -1.89
COL13A1Q5TAT6 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
COL13A1Q5TAT6 AC073325.2-201ENST00000339545 159 ntBASIC3.21□□□□□ -1.9
COL13A1Q5TAT6 Y_RNA.495-201ENST00000384435 112 ntBASIC3.21□□□□□ -1.9
COL13A1Q5TAT6 Y_RNA.528-201ENST00000384575 108 ntBASIC3.21□□□□□ -1.9
COL13A1Q5TAT6 AC108667.1-201ENST00000428618 249 ntBASIC3.21□□□□□ -1.9
COL13A1Q5TAT6 AL356320.1-201ENST00000429616 163 ntBASIC3.21□□□□□ -1.9
COL13A1Q5TAT6 AC021205.2-201ENST00000480069 347 ntBASIC3.21□□□□□ -1.9
COL13A1Q5TAT6 RNU1-142P-201ENST00000516682 145 ntBASIC3.21□□□□□ -1.9
COL13A1Q5TAT6 DLEU2_6.1-201ENST00000610536 112 ntBASIC3.21□□□□□ -1.9
COL13A1Q5TAT6 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC3.21□□□□□ -1.9
COL13A1Q5TAT6 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
COL13A1Q5TAT6 ZNF271P-202ENST00000465539 1970 ntBASIC3.21□□□□□ -1.9
COL13A1Q5TAT6 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.21□□□□□ -1.9
COL13A1Q5TAT6 PWAR6-201ENST00000552334 4618 ntBASIC3.2□□□□□ -1.9
COL13A1Q5TAT6 MIR570-201ENST00000384917 97 ntBASIC3.2□□□□□ -1.9
COL13A1Q5TAT6 SNORA12.1-201ENST00000390873 148 ntBASIC3.2□□□□□ -1.9
COL13A1Q5TAT6 MIR1263-201ENST00000408324 86 ntBASIC3.2□□□□□ -1.9
COL13A1Q5TAT6 SRIP3-201ENST00000413200 219 ntBASIC3.2□□□□□ -1.9
COL13A1Q5TAT6 FTH1P12-201ENST00000432137 551 ntBASIC3.2□□□□□ -1.9
COL13A1Q5TAT6 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
COL13A1Q5TAT6 AC006539.3-201ENST00000454258 129 ntBASIC3.2□□□□□ -1.9
COL13A1Q5TAT6 COX6CP6-201ENST00000490840 228 ntBASIC3.2□□□□□ -1.9
COL13A1Q5TAT6 RNU6-693P-201ENST00000516134 107 ntBASIC3.2□□□□□ -1.9
COL13A1Q5TAT6 RNU6-1291P-201ENST00000516591 104 ntBASIC3.2□□□□□ -1.9
COL13A1Q5TAT6 RNU6-1270P-201ENST00000517128 108 ntBASIC3.2□□□□□ -1.9
COL13A1Q5TAT6 IGKV1-22-201ENST00000524313 326 ntBASIC3.2□□□□□ -1.9
COL13A1Q5TAT6 MIR1273D-201ENST00000577266 86 ntBASIC3.2□□□□□ -1.9
COL13A1Q5TAT6 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC3.2□□□□□ -1.9
COL13A1Q5TAT6 MIR338-201ENST00000636369 67 ntBASIC3.2□□□□□ -1.9
COL13A1Q5TAT6 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
COL13A1Q5TAT6 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
COL13A1Q5TAT6 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC3.19□□□□□ -1.9
COL13A1Q5TAT6 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC3.19□□□□□ -1.9
COL13A1Q5TAT6 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.19□□□□□ -1.9
COL13A1Q5TAT6 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
COL13A1Q5TAT6 MIR126-201ENST00000362291 85 ntBASIC3.19□□□□□ -1.9
COL13A1Q5TAT6 SNORD72-201ENST00000390994 80 ntBASIC3.19□□□□□ -1.9
COL13A1Q5TAT6 RNU1-131P-201ENST00000458943 161 ntBASIC3.19□□□□□ -1.9
COL13A1Q5TAT6 AC092185.1-201ENST00000491371 97 ntBASIC3.19□□□□□ -1.9
COL13A1Q5TAT6 RN7SL636P-201ENST00000497504 294 ntBASIC3.19□□□□□ -1.9
COL13A1Q5TAT6 RNU6-1149P-201ENST00000516810 97 ntBASIC3.19□□□□□ -1.9
COL13A1Q5TAT6 AP002004.2-201ENST00000531656 154 ntBASIC3.19□□□□□ -1.9
COL13A1Q5TAT6 MIR4679-1-201ENST00000637619 75 ntBASIC3.19□□□□□ -1.9
COL13A1Q5TAT6 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.18□□□□□ -1.9
COL13A1Q5TAT6 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC3.18□□□□□ -1.9
COL13A1Q5TAT6 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
COL13A1Q5TAT6 SNORD114-26-201ENST00000363543 72 ntBASIC3.18□□□□□ -1.9
COL13A1Q5TAT6 RNA5SP125-201ENST00000364843 120 ntBASIC3.18□□□□□ -1.9
COL13A1Q5TAT6 Y_RNA.410-201ENST00000383992 113 ntBASIC3.18□□□□□ -1.9
COL13A1Q5TAT6 SNORD77.3-201ENST00000391113 65 ntBASIC3.18□□□□□ -1.9
COL13A1Q5TAT6 RNA5SP21-201ENST00000410917 96 ntBASIC3.18□□□□□ -1.9
COL13A1Q5TAT6 EDDM3CP-201ENST00000415977 425 ntBASIC3.18□□□□□ -1.9
COL13A1Q5TAT6 AC009238.1-201ENST00000442165 424 ntBASIC3.18□□□□□ -1.9
COL13A1Q5TAT6 AC009237.6-201ENST00000446969 424 ntBASIC3.18□□□□□ -1.9
COL13A1Q5TAT6 Y_RNA.666-201ENST00000516187 112 ntBASIC3.18□□□□□ -1.9
COL13A1Q5TAT6 AC068657.1-201ENST00000520807 306 ntBASIC3.18□□□□□ -1.9
COL13A1Q5TAT6 AC024995.1-201ENST00000523014 93 ntBASIC3.18□□□□□ -1.9
COL13A1Q5TAT6 MIR3616-201ENST00000584070 92 ntBASIC3.18□□□□□ -1.9
COL13A1Q5TAT6 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC3.18□□□□□ -1.9
COL13A1Q5TAT6 AL137067.1-201ENST00000615933 120 ntBASIC3.18□□□□□ -1.9
COL13A1Q5TAT6 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
COL13A1Q5TAT6 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
COL13A1Q5TAT6 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC3.17□□□□□ -1.9
COL13A1Q5TAT6 Y_RNA.99-201ENST00000363138 105 ntBASIC3.17□□□□□ -1.9
COL13A1Q5TAT6 Y_RNA.267-201ENST00000364679 109 ntBASIC3.17□□□□□ -1.9
COL13A1Q5TAT6 MIR548A2-201ENST00000384956 97 ntBASIC3.17□□□□□ -1.9
COL13A1Q5TAT6 MIR802-201ENST00000390235 94 ntBASIC3.17□□□□□ -1.9
COL13A1Q5TAT6 RNA5SP467-201ENST00000391274 118 ntBASIC3.17□□□□□ -1.9
COL13A1Q5TAT6 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC3.17□□□□□ -1.9
COL13A1Q5TAT6 CST9LP2-201ENST00000437612 320 ntBASIC3.17□□□□□ -1.9
COL13A1Q5TAT6 RPS29P12-201ENST00000460178 152 ntBASIC3.17□□□□□ -1.9
COL13A1Q5TAT6 SCARNA15-202ENST00000516881 127 ntBASIC3.17□□□□□ -1.9
COL13A1Q5TAT6 RNU6-667P-201ENST00000517186 102 ntBASIC3.17□□□□□ -1.9
COL13A1Q5TAT6 AC007012.1-201ENST00000567192 175 ntBASIC3.17□□□□□ -1.9
COL13A1Q5TAT6 MIR5197-201ENST00000583721 112 ntBASIC3.17□□□□□ -1.9
COL13A1Q5TAT6 AC007318.2-201ENST00000620999 243 ntBASIC3.17□□□□□ -1.9
COL13A1Q5TAT6 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC3.17□□□□□ -1.9
COL13A1Q5TAT6 RNU6-106P-201ENST00000384405 107 ntBASIC3.16□□□□□ -1.9
COL13A1Q5TAT6 MIR522-201ENST00000385071 87 ntBASIC3.16□□□□□ -1.9
COL13A1Q5TAT6 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC3.16□□□□□ -1.9
COL13A1Q5TAT6 CALM2P4-201ENST00000430810 426 ntBASIC3.16□□□□□ -1.9
COL13A1Q5TAT6 AL049830.1-201ENST00000468034 425 ntBASIC3.16□□□□□ -1.9
COL13A1Q5TAT6 RPS26P48-201ENST00000491713 339 ntBASIC3.16□□□□□ -1.9
COL13A1Q5TAT6 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC3.16□□□□□ -1.9
COL13A1Q5TAT6 RNU6-1041P-201ENST00000516254 102 ntBASIC3.16□□□□□ -1.9
COL13A1Q5TAT6 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.16□□□□□ -1.9
COL13A1Q5TAT6 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC3.16□□□□□ -1.9
COL13A1Q5TAT6 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC3.16□□□□□ -1.9
COL13A1Q5TAT6 uc_338.28-201ENST00000612082 187 ntBASIC3.16□□□□□ -1.9
COL13A1Q5TAT6 AL591926.4-201ENST00000616895 298 ntBASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 108.3 ms