Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 SNORA31.21-201ENST00000517180 77 ntBASIC3.24□□□□□ -1.89
RNFT1Q5M7Z0 SNORA70.24-201ENST00000517233 118 ntBASIC3.24□□□□□ -1.89
RNFT1Q5M7Z0 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.24□□□□□ -1.89
RNFT1Q5M7Z0 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
RNFT1Q5M7Z0 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
RNFT1Q5M7Z0 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
RNFT1Q5M7Z0 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
RNFT1Q5M7Z0 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
RNFT1Q5M7Z0 RNU6-1094P-201ENST00000362416 104 ntBASIC3.23□□□□□ -1.89
RNFT1Q5M7Z0 RNU4-35P-201ENST00000362588 141 ntBASIC3.23□□□□□ -1.89
RNFT1Q5M7Z0 RNU1-33P-201ENST00000364249 162 ntBASIC3.23□□□□□ -1.89
RNFT1Q5M7Z0 Y_RNA.470-201ENST00000384307 117 ntBASIC3.23□□□□□ -1.89
RNFT1Q5M7Z0 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
RNFT1Q5M7Z0 RNU6-129P-201ENST00000391022 107 ntBASIC3.23□□□□□ -1.89
RNFT1Q5M7Z0 RPL31P63-201ENST00000422565 375 ntBASIC3.23□□□□□ -1.89
RNFT1Q5M7Z0 AC009969.1-201ENST00000438726 172 ntBASIC3.23□□□□□ -1.89
RNFT1Q5M7Z0 AL135938.1-201ENST00000443141 297 ntBASIC3.23□□□□□ -1.89
RNFT1Q5M7Z0 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC3.23□□□□□ -1.89
RNFT1Q5M7Z0 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC3.23□□□□□ -1.89
RNFT1Q5M7Z0 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.23□□□□□ -1.89
RNFT1Q5M7Z0 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.23□□□□□ -1.89
RNFT1Q5M7Z0 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.23□□□□□ -1.89
RNFT1Q5M7Z0 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
RNFT1Q5M7Z0 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
RNFT1Q5M7Z0 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.23□□□□□ -1.89
RNFT1Q5M7Z0 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.22□□□□□ -1.89
RNFT1Q5M7Z0 RNU6-546P-201ENST00000383991 107 ntBASIC3.22□□□□□ -1.89
RNFT1Q5M7Z0 SNORD17-201ENST00000390930 237 ntBASIC3.22□□□□□ -1.89
RNFT1Q5M7Z0 SNORA40.18-201ENST00000391200 128 ntBASIC3.22□□□□□ -1.89
RNFT1Q5M7Z0 KRTAP19-11P-201ENST00000439851 104 ntBASIC3.22□□□□□ -1.89
RNFT1Q5M7Z0 UBL5P1-201ENST00000507979 193 ntBASIC3.22□□□□□ -1.89
RNFT1Q5M7Z0 IGHVIII-5-1-201ENST00000523059 99 ntBASIC3.22□□□□□ -1.89
RNFT1Q5M7Z0 MIR3152-201ENST00000579801 74 ntBASIC3.22□□□□□ -1.89
RNFT1Q5M7Z0 MIR338-201ENST00000636369 67 ntBASIC3.22□□□□□ -1.89
RNFT1Q5M7Z0 MIR6841-201ENST00000637129 72 ntBASIC3.22□□□□□ -1.89
RNFT1Q5M7Z0 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.22□□□□□ -1.89
RNFT1Q5M7Z0 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
RNFT1Q5M7Z0 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
RNFT1Q5M7Z0 TNPO1P3-201ENST00000436471 2662 ntBASIC3.21□□□□□ -1.9
RNFT1Q5M7Z0 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
RNFT1Q5M7Z0 RNU6ATAC41P-201ENST00000408600 126 ntBASIC3.21□□□□□ -1.9
RNFT1Q5M7Z0 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.21□□□□□ -1.9
RNFT1Q5M7Z0 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.21□□□□□ -1.9
RNFT1Q5M7Z0 SNORA74D-201ENST00000516404 141 ntBASIC3.21□□□□□ -1.9
RNFT1Q5M7Z0 AC090821.2-201ENST00000523552 176 ntBASIC3.21□□□□□ -1.9
RNFT1Q5M7Z0 MIR3186-201ENST00000577404 85 ntBASIC3.21□□□□□ -1.9
RNFT1Q5M7Z0 MIR5195-201ENST00000583555 115 ntBASIC3.21□□□□□ -1.9
RNFT1Q5M7Z0 MIR7851-201ENST00000610611 160 ntBASIC3.21□□□□□ -1.9
RNFT1Q5M7Z0 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC3.21□□□□□ -1.9
RNFT1Q5M7Z0 SEPT14P17-201ENST00000617978 177 ntBASIC3.21□□□□□ -1.9
RNFT1Q5M7Z0 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
RNFT1Q5M7Z0 AC093908.1-201ENST00000623125 8092 ntBASIC3.21□□□□□ -1.9
RNFT1Q5M7Z0 CTSLP2-204ENST00000629029 392 ntBASIC3.21□□□□□ -1.9
RNFT1Q5M7Z0 AC244205.2-202ENST00000635781 342 ntBASIC3.21□□□□□ -1.9
RNFT1Q5M7Z0 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
RNFT1Q5M7Z0 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
RNFT1Q5M7Z0 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
RNFT1Q5M7Z0 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
RNFT1Q5M7Z0 SNORA22.1-201ENST00000362701 134 ntBASIC3.2□□□□□ -1.9
RNFT1Q5M7Z0 Y_RNA.340-201ENST00000365330 92 ntBASIC3.2□□□□□ -1.9
RNFT1Q5M7Z0 RNU6-1083P-201ENST00000384022 107 ntBASIC3.2□□□□□ -1.9
RNFT1Q5M7Z0 MIR483-201ENST00000385070 76 ntBASIC3.2□□□□□ -1.9
RNFT1Q5M7Z0 RNA5SP482-201ENST00000391269 118 ntBASIC3.2□□□□□ -1.9
RNFT1Q5M7Z0 RN7SL504P-201ENST00000494496 287 ntBASIC3.2□□□□□ -1.9
RNFT1Q5M7Z0 PHBP14-201ENST00000512887 367 ntBASIC3.2□□□□□ -1.9
RNFT1Q5M7Z0 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC3.2□□□□□ -1.9
RNFT1Q5M7Z0 MIR3651-201ENST00000630427 90 ntBASIC3.2□□□□□ -1.9
RNFT1Q5M7Z0 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.2□□□□□ -1.9
RNFT1Q5M7Z0 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
RNFT1Q5M7Z0 AL442644.1-201ENST00000454390 3105 ntBASIC3.2□□□□□ -1.9
RNFT1Q5M7Z0 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
RNFT1Q5M7Z0 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.19□□□□□ -1.9
RNFT1Q5M7Z0 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
RNFT1Q5M7Z0 MIR515-2-201ENST00000384883 83 ntBASIC3.19□□□□□ -1.9
RNFT1Q5M7Z0 MIR515-1-201ENST00000384884 83 ntBASIC3.19□□□□□ -1.9
RNFT1Q5M7Z0 RNA5SP252-201ENST00000391131 119 ntBASIC3.19□□□□□ -1.9
RNFT1Q5M7Z0 RNU6-613P-201ENST00000410412 108 ntBASIC3.19□□□□□ -1.9
RNFT1Q5M7Z0 RNA5SP120-201ENST00000410900 112 ntBASIC3.19□□□□□ -1.9
RNFT1Q5M7Z0 AC005326.1-201ENST00000429197 123 ntBASIC3.19□□□□□ -1.9
RNFT1Q5M7Z0 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC3.19□□□□□ -1.9
RNFT1Q5M7Z0 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
RNFT1Q5M7Z0 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.19□□□□□ -1.9
RNFT1Q5M7Z0 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.19□□□□□ -1.9
RNFT1Q5M7Z0 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
RNFT1Q5M7Z0 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
RNFT1Q5M7Z0 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.19□□□□□ -1.9
RNFT1Q5M7Z0 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
RNFT1Q5M7Z0 AC092435.3-201ENST00000565538 3654 ntBASIC3.18□□□□□ -1.9
RNFT1Q5M7Z0 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
RNFT1Q5M7Z0 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.18□□□□□ -1.9
RNFT1Q5M7Z0 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
RNFT1Q5M7Z0 RNU6-525P-201ENST00000363685 104 ntBASIC3.18□□□□□ -1.9
RNFT1Q5M7Z0 Y_RNA.494-201ENST00000384432 111 ntBASIC3.18□□□□□ -1.9
RNFT1Q5M7Z0 MIR1265-201ENST00000408444 86 ntBASIC3.18□□□□□ -1.9
RNFT1Q5M7Z0 RN7SL601P-201ENST00000471221 293 ntBASIC3.18□□□□□ -1.9
RNFT1Q5M7Z0 AC114811.1-201ENST00000507207 168 ntBASIC3.18□□□□□ -1.9
RNFT1Q5M7Z0 RNU7-2P-201ENST00000516096 62 ntBASIC3.18□□□□□ -1.9
RNFT1Q5M7Z0 RNU2-27P-201ENST00000516185 142 ntBASIC3.18□□□□□ -1.9
RNFT1Q5M7Z0 IGKV2-26-201ENST00000518305 343 ntBASIC3.18□□□□□ -1.9
RNFT1Q5M7Z0 IGLV3-17-201ENST00000519099 244 ntBASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 112.2 ms